Array 1 265532-264439 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFUK01000001.1 Campylobacter coli strain NCTC12885, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 265531 36 91.7 31 .GG...............T................. CTCCTTTAGCAGAATAAGGCGACGCTTGATA 265464 36 100.0 30 .................................... AGATTTTTCATTTAAATGATGATGAGTTAA 265398 36 100.0 30 .................................... AGATTTTTCATTTAAATGATGATGAGTTAA 265332 36 100.0 30 .................................... TAAAAAACCGCTAAGACAAAACTACCAGTT 265266 36 100.0 30 .................................... CTGTTTTATTATCAATAACGCCTTTACTAA 265200 36 100.0 30 .................................... GCTTTAGGAAATGCTTTAAAACGCTTTGGA 265134 36 100.0 30 .................................... ATAGCGATGGTAATTGGCTTGAAAATATAG 265068 36 100.0 30 .................................... TTGAGCGTTTAAACTTGATAAGATACCTGC 265002 36 100.0 30 .................................... AATACCTTACTTATACGAAAAAAATATTGT 264936 36 100.0 30 .................................... CATTGTTTATAATACTATCACTTGCTAAAA 264870 36 100.0 30 .................................... TGTACTGAAATAAATGAGTTTATAGCAAAT 264804 36 100.0 30 .................................... AATACACATTTTATTATATTTAATAAAAAA 264738 36 100.0 30 .................................... TGTAGCTGGTAAGGTTATAAGAGGTTTATT 264672 36 100.0 30 .................................... TATGGCAGTTTTTAAGAGAGCTTGGCGGTT 264606 36 100.0 30 .................................... GCAACTGGTAGCACTTTAACAACTACAGAG 264540 36 100.0 30 .................................... TATAAAAATATGAAAATAGTATCTTACGCA 264474 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 17 36 99.5 30 GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : GCCGACATAAAACCAGGCAGACATATCAAAATAGCCAAGGCTAATGAAAAATTCATCATCGCCTTACCAGGTTTTCCTTACTCGGCTATGGTAATGTTTAATCTTTACGCAAGAGAGATTTTAAACTCTTGGTTACTTCAGCCTAAAGACTATATTTGCAAAGCCTTTTTACAAGGAAGCTACAAGAAAAAAACACCTTATTTGGAATTTGTCGCTTGCAATATAGAGTTTAAAAATGGACGCATTTTAGCTAATCTTGAAGGTAAAAAAGAAGGCTCTAGTGCGATTATAAACAATCTTAACAATAAAGCTGCCCTTATGGTAGTACCAAAAGAATGTGAAATGTTAGAAAATGAAAGCTTAGTGGATATTATCTTTATGCCTTAAAATTATTTAAATAATTTTATTTCGATTTTAATCAACCCTAAATTTCAATAAGTTTCAAATTCGCAACCTCCTTTTAGTGGAGTAATTAGCCCTAGCGGAGTTTCAATCCACTA # Right flank : AGATATTTACCAGATAATGAAAATTTCGGGGTTTTTTGATGAAAAATAGCAAAAATTATGCTATAATCTCAATAAGAAATTTAAAAAGGGACTAAAATAAAGAGTTTGCGGGACTCTGCGGGGTTACAATCCCCTAAAACCGCTTTTAAAATTCAAATAAATTTTGCTGATGATATTTTTCTTGTTTTTTGTTTAGTTGTATTTCTTCATTATTTGAATTTTTGTATTTAAATTCTCCATGACTATCTATATCAAAAAGCGTTAAATTAGTTTCGTTATTAACTTTTTCATTAAAAACTATGCCACCAAGCAAAAGCTCCATTTTATCAAACTGCTTTTCAGTGATGATTAAAGCCCTTACATTTCCATAAGGTGGCAAAATCTTTTTTACATTTTCAATAGAACTTTTTGCAGAACTTAAACCCTTGCAAATACGCATATAAACGCTAAATTGTAGCATAAAATAACCCAATTTTATAAGATTGTTTCTAAATTTACTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //