Array 1 500615-496210 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMXF01000001.1 Persicitalea jodogahamensis strain KCTC 12866 sequence01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 500614 29 100.0 35 ............................. TCAGGCTCGTTACCTGGCCTTCAAGCGTGGTCACC 500550 29 100.0 37 ............................. GCACTATACATTTCTACGTTGAAGACGCGATGTGTGT 500484 29 100.0 35 ............................. GCTATACGTACCAAGATCTCGCGGCGGTCCTGCCA 500420 29 100.0 35 ............................. GTCGGTTTCCAGCAACTTCTCGGCCACAAACAACC 500356 29 100.0 37 ............................. TCAAAAAGGAGGCTGAACGTCAGCGTAAAATTGCCAA 500290 29 100.0 37 ............................. AAAAAAACTGGTTGACTTGTACATTAAGGAGATCCAC 500224 29 100.0 36 ............................. GAGGCCCAGGAAAAGGTGGGTTTCTATGCAGGGGCA 500159 29 100.0 37 ............................. TTTGAAATTCTCATTTTTCATACTTAACTCGTTGGAG 500093 29 100.0 38 ............................. TTCTGGCTGGTGATCGTGCCATTGGTCAGGTTCCATAC 500026 29 100.0 37 ............................. AAGCCAAAAGCCTCCTCACCGACAAGGAGCAGCTGGC 499960 29 100.0 37 ............................. GCGTGTGGTACCGGCTGGCTTCGTCTCGGACGGGCTT 499894 29 100.0 36 ............................. AGGCCCAAGGCCAGGTAACGAAGCTGACGGAGGAAC 499829 29 100.0 37 ............................. GGTGGCATGTACTCCCAGTTACCACGATCAATGAGGC 499763 29 100.0 38 ............................. ACAAGCGGGAAGCCTGGCTGATTATTACGAATCTGCTA 499696 29 100.0 37 ............................. ACATACTCCGGCTTGATGCTGCCCAGGTCGAATACTA 499630 29 100.0 37 ............................. AAATTAAAAAGCAGGAGCTGAAGGCAAAGGCGGGACA 499564 29 100.0 37 ............................. ATTTTGGAATAGGGAGTTTTCCAGGCAGCGGATTGCT 499498 29 100.0 38 ............................. GAATCATTGCGCAGTCGTTTTTTCAGGCGTATGTCCAG 499431 29 100.0 37 ............................. GGTGGTGATCTCGCTAGGGGTGTTACAGCCGCGCCAG 499365 29 100.0 35 ............................. ATGCCCATTGTGGGGCCATTGACGGCGGAGCACGC 499301 29 100.0 36 ............................. ATGTACCAGAATATGCTTTGAGCAGTCGTACCGGGA 499236 29 100.0 37 ............................. TGACTGTCGAGTAAATGACATATGCCAATGATGGCCA 499170 29 100.0 36 ............................. GCATTCAGATTGCTGGCATCGCGGTAGAACGCGCTG 499105 29 100.0 36 ............................. AGAAATTCACCACCGAAACGGTGCGGGAATACGCGG 499040 29 100.0 36 ............................. GGTATTGGCTGTGAATTGTAATGTCTCCTTCGGGTG 498975 29 100.0 38 ............................. GATGGTGGGTGCTTTCCTGCTTTATGCGTTTGATTTAG 498908 29 100.0 36 ............................. GTACGCGAGCTCGACGTTCTTCTTCGCCCATATCTC 498843 29 100.0 35 ............................. GGTATGTATGCGGATTGTACGGATGAAGTGGAAAC 498779 29 100.0 35 ............................. GAGTGTACGAACCACAGTATTGCGAAAGGCCAGCG 498715 29 100.0 38 ............................. ATGTGAAGGCGGTAGTAGATACGGATTACCTGCCGGAG 498648 29 100.0 36 ............................. ACGATACCACCACCGACGATGACGGGAATATCAACA 498583 29 100.0 36 ............................. AAATAATAGCCAGGTAAGTGATGCTATGGATGCCTT 498518 29 100.0 35 ............................. TGAAGTCCTCATTGATGTAGTAATTATTCTGAAAC 498454 29 100.0 36 ............................. TAGGGTAGGGAAAATCCAGAAGCTCCATATTAGCAA 498389 29 100.0 37 ............................. AATTGTCGGAATTCAAACTTATTCATGGAGATACCAA 498323 29 100.0 36 ............................. GATACGCACCACGATTGCGCGGATATTTCGGAGACG 498258 29 100.0 36 ............................. CGGCGAGGCTTTTGTTGCCTGGGCGGATGAGTACTT 498193 29 100.0 35 ............................. ATGCAGTTTTGGGACGAGGAGTACAAGCGGACGAA 498129 29 100.0 37 ............................. TCGAGTATCGCATCCCCGTCTACACGCGACGTCTTCA 498063 29 100.0 37 ............................. AATCCAGTATCTCCGCTGAGCCGTACAGATAATCGAA 497997 29 100.0 37 ............................. GGGGGCCAGTTCCATATACACGGTAGCCTGCGCCCTG 497931 29 100.0 37 ............................. CCAGCAATTCCATATTCGCCTGGTCGTCGCCAATCTC 497865 29 100.0 36 ............................. ATATCTATCGGGCAGCAGTGGCGTAAGAAGGACTTG 497800 29 100.0 35 ............................. TTGGATTTCATGGGGCTACAACTCGGATACCGCTC 497736 29 100.0 35 ............................. TGCTGCGCACCGGGCCTAGCGGCCCGCCCCTCCCA 497672 29 100.0 37 ............................. ACGTTGCAGGTTCTTTTCTGAACTGCTGCCATTCCCC 497606 29 100.0 37 ............................. TCCGGTGGGGTCGCGTCGCTTCGCTCCGGCCCCCTCC 497540 29 100.0 35 ............................. ACGTTAAGAAATTGCACTTTCGAGGGCAGTCTCTT 497476 29 100.0 37 ............................. AATTTCCGAGGGAATGGCAAGACGCCTGGACGGTGAA 497410 29 100.0 35 ............................. GGTAGTTTTGAGGTCTGCATGGCCTAGGCTGTCGG 497346 29 100.0 35 ............................. TGTTCCTGAACCTTGTCGCCCTCCCTTAATAAATC 497282 29 100.0 35 ............................. GAACAATGACACCATGCAACAAGCAGATTTTACGG 497218 29 100.0 36 ............................. TTTCGCCCTGGCGGGTGATGACGTGTGAGCAGTAGT 497153 29 100.0 36 ............................. CATTTTGTGCGGGTTTACTCGCTGCGTTTCCGGTGT 497088 29 100.0 36 ............................. CGAGGATTCCGTTCGTTTGTTCGTCCGGCTGACATC 497023 29 100.0 36 ............................. AAAGATGTTGTCGAGAGCTTCGGCGGTGATCGTGTT 496958 29 100.0 36 ............................. GTTATGGCGTGGATGGTGGGTAACGTCGTGATGCAG 496893 29 100.0 38 ............................. TGGCTGTACGCTCACGCCTTCACCCGCAATTACTGCAA 496826 29 100.0 36 ............................. CCGAGCAGTAGCATAAGTACCCACGACATATCGAGT 496761 29 100.0 37 ............................. TACTGCATGGCGCCGAAGGTGCCGCAAAACTGCACAC 496695 29 100.0 35 ............................. GAAAGTGCCTAAGCCAGTTGTCTATGATCTGGCTG 496631 29 100.0 36 ............................. TTCTGTACTGCATCCAAAAACCATTGGCGAATAATG 496566 29 100.0 36 ............................. GCGTACTCGGTGAACGCGTAGTAAAGGCGCTCACTC 496501 29 100.0 37 ............................. AACGCTGAAAGGCTGGGCACCGAAAGAGGCACACCGC 496435 29 100.0 37 ............................. CATCGTGCCACGTGGTCAACCCTTAGCGTGAGTAAAA 496369 29 100.0 37 ............................. TCGGCATGGGCTTCGATGCCAACGCCGAGGCGCAGAT 496303 29 100.0 36 ............................. GGGTCATATCGGTAGCGAATCGGACCGGAAGGGCGG 496238 29 96.6 0 ...........................T. | ========== ====== ====== ====== ============================= ====================================== ================== 68 29 100.0 36 CCTTCAATTTGACCTGCTGGTATTGAAAT # Left flank : TTATGCCTTACTTCGTAGCAGTGTATGATGTGAACCAAAAGCGAGTGGGCAAAATGCTCAAGCTCTTCCGTCGCTATCTGACCTGGATTCAGAATTCGGTCTTTGAGGGCGAGCTGACGCCTGCGCAGTTCAAGTCACTACAGACCGAAGCCGACCAACTCATGCAGGAAGGAGACGGCGTAGTTTTCTACCAACTCCGCGACGAACGTTACATGGACCGTATCGCCCTGGGGAAGGAAAAGGCAGAAAAGTCTCGTTTCCTGTAAGTTGTATGAAAGCTGAGTCGTCAGAGTCCGTTTTTTAGGTACAGGGTCATCGCTCAATGCCACAGTAAAGCCTTGTATTGCGTTCATTTTTCTGCAAAAAGTACCCTGATGTACTCAAAAATGCGTGTCGTCAGCCCAGCGGTTTTTTAGCACTATCGTAGGCTGACGATTTTCAGTAAAGTTTTTCGTCCTAAAATGAATGTTTCCGCCGCATAAAGGCTATTTTAGCGGCGC # Right flank : TGGCCCAATGGTAGCTGATTATAGGTTTGGCTCGACCTTCGATCTAACGATTCGACAAGTAAATGAATTACAACAAAAGACTTTGAACCAGAGAACGTCGGTTTAACTATGAAGCTCTCGAATTTTGGTCGTTTTATCAAAAACTCCTGTCTTTCCCTTTTAATACTGCCTTGGCTTGCGCATACCGGAGCTCCAGCCCAACAGACACAGCGACCCAACGTGCTCTTCATCATGGCCGACGACATGGGATTCGGCGACATCCGCATGGCCGGAAACCCAAACATCCACACGCCCAATCTGGATCAGCTGTCGGGAGAAAGCGTCAACTTCACCAACTTCTACGTCTCGCCCGTCTGCGCCCCCACGCGGGCGAGTTTGCTCACAGGGAAGTACGCCCAGCGGGTGGGGGTACTGAGCGTAACCAACGGCTATGAGACCTTGAATCCCGAAGCCACAACCATCGCCGAGATGATGGCGGCCGCGGGCTACCGGACCGGGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCAATTTGACCTGCTGGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 35272-35053 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMXF01000007.1 Persicitalea jodogahamensis strain KCTC 12866 sequence07, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ===================================== ================== 35271 27 92.6 37 ...........C..T............ GTTCTTTGCTTTGTCCGGAAAGTTTAATGATAAGTCT 35207 27 96.3 37 ...........C............... AAGGTCAGCGCCGCCAGTACAGTCAGGACCACAAACC 35143 27 100.0 37 ........................... CGGCAAGATCGAAAGTGGACTTTGGTCGTTGAAAGCT 35079 27 88.9 0 .............GT.....C...... | ========== ====== ====== ====== =========================== ===================================== ================== 4 27 94.4 37 TTCAATCTGACTTTCTGGTATTGAAAT # Left flank : GCGCTGCGCTTCGAGCCCCAGCTGGCTGTCGCCCTGCTTGCGCGTCGAGACGCGGAAGTAGGCCACGTACTCCGCGGGCTCGGTCTGGTTGAATTCAATCATGACGTGTTTTCGGTTTTTCCAGGTTATCCATCGGCACTGCTGCCGGAATGTCAGGCGAAAGTAGCCAAACCGGGCGGGTATTACAAACCTACGACGACCCTCATTGGTCTGTAATTGGAGTGCAGCAAAAAGTGTGGGGCAACTGAGTAATTTTGATAAAATTACATACATGGCGGAGATTCAGCAACGACCGGTCGTCCGGAATGTGTCAAATACCTCTTATTTCTAGCTCGCAGGAAGGTGCTGTATGAGGGATGGGACGTCTGTTTTCGGCAACGCTATCCGGGCTTTGGCCAGGTTTCCTAGAAACACGTTTCGATTGCCGCTTAATCTAGATTACCCCGCAGCGGCGGGCCACCACACTTTTTGATGCTCTCCTAATTAATGCACAAAAAACT # Right flank : GTGCTTCCATACCCAAGAATTGAATCAGGAAGAATATTTACATAATTTCCAAAGATGCTCGAAACAATTGTTCCGGATAAGCTTAGTCTTCACATGCCCGGTCTTTTTTGGCCAGGGTCATGTTAACGAAAGCGATTTAACCTTTTTTTTAATGGTGGGGTACGGTTTATGAACATTGGGTTAGAAAAATGCAGCTCAGACAATTCTAAACGGCTTTTAGCATAGAATGAGGGGTGAAAACCCCAAGTCGATTTGCAGTTTTGAAATCATCCTAGCCGACGGGAGCTGTGCTAACTTTCTTATTTTCCTAGCAGAGTTATTTGATGACCTTCGCAAACTCATATTCATTTACGCTGAGACGGGTATGCTTTTCCTCTTGCCCTCACTGGTTGAATGGACATTTTTTAAGTTTATTTCATTCCAAAGTATTCATCTATTTTGGATGCGATTTCTTCCCTTCCCGGTAGCAATTCTTTGTATTGACTCGGTAGCTTTGCCAT # Questionable array : NO Score: 3.77 # Score Detail : 1:0, 2:0, 3:3, 4:0.72, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCAATCTGACTTTCTGGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.37%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [3-3] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA //