Array 1 8908-11814 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBHP01000004.1 Tepidiphilus sp. J10 Scaffold4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 8908 37 100.0 35 ..................................... AAAGCGTAAAAAATATAACCTTCACGCGCGGGGAC 8980 37 100.0 35 ..................................... TTGCAGATTCCAGCCAGCTTTCCGAACACGCTTAT 9052 37 100.0 37 ..................................... GGCGGCAGCTCGATCAGGTCTTGCAGGTGGTCGTAGA 9126 37 100.0 35 ..................................... AGCCACCGCCTCAGCCACCGCTTCGGCGTAGGCTT 9198 37 100.0 35 ..................................... GACTGGTAGCGCTTGGCCTCGTCTGATCCGGTTAG 9270 37 100.0 34 ..................................... GCCGTCGATGGAAATTTTTGTTGCTGGCGTGCTC 9341 37 100.0 31 ..................................... CCTCGTCAGTGGTAAATTTGGCCTTCATGAT 9409 37 100.0 36 ..................................... ATTACCAGGAAGATAAAAATCTACTCGAACAGAACT 9482 37 100.0 36 ..................................... TTTGAACTCGACTTTCATGGTATCCCCACAGTTCAG 9555 37 100.0 36 ..................................... GCGGGCTCATCGCCGCACCTCCGCCCATCCGATCGG 9628 37 100.0 35 ..................................... GTTTCCGTGATTCCAAACATCATTGGCGGTCGCGT 9700 37 100.0 33 ..................................... CGAGCCGCTCCTCTTTGCCTATCTTGGGCGGTC 9770 37 100.0 34 ..................................... CGCTTGATGTCCTTTATCGCACTGGTGGGGATGA 9841 37 100.0 35 ..................................... ATCTTGGCCACCACCGAGGCCACCTTCCCGGTGGC 9913 37 100.0 33 ..................................... TGTTCAATTGGGGCGAATAGGACGATCTCTACA 9983 37 100.0 34 ..................................... GCTCGGCCCTTGCCCAGGGCCTCGACCGGGCGCA 10054 37 100.0 36 ..................................... AGCGAGTCCAGGGCAATTATTCAAAGGCATAACGAC 10127 37 100.0 36 ..................................... TCTACCCATTCAGGTAGGGCGGCCGAAATGAACTGC 10200 37 100.0 33 ..................................... GTTTTCTCAGTCATGATTGTTGCTCCTTAGTGA 10270 37 100.0 34 ..................................... GACGCGCAGCTTCGCAACGCGACCTGCGCCAGAA 10341 37 100.0 34 ..................................... AACTCGACGAAGATATAGCTCCCCGCCTCCTTGA 10412 37 100.0 35 ..................................... TTCCCTTCTTCCGTCCACTCCGGCAGGGCGGCCGA 10484 37 100.0 35 ..................................... GGCAGGGCGGCCGAAATGAACTCCTCGTGGGTGAT 10556 37 100.0 36 ..................................... AATGGCTTACGATTTTTTTTTGGTTTGTTTTACCCT 10629 37 100.0 35 ..................................... TCTTATGTCAGCTTCAATGCCGCCCTAATGGCGGC 10701 37 100.0 35 ..................................... GGCAGGGCGGCGGCAAGGAATTCCTCGTGGGTGAT 10773 37 100.0 36 ..................................... GAACTTGATTACCACTGCATCGCCATTCATCTTCGT 10846 37 100.0 35 ..................................... AAGATCGCTCTTCCCGACGATGGTCAGGGGCGCGC 10918 37 100.0 36 ..................................... AGCGTTTCCGACTCGATCTTGCTGGTGCCGGCGTGC 10991 37 100.0 34 ..................................... GCCTCATTCAGGCGAGGATAGTCGAACATAATCG 11062 37 100.0 37 ..................................... ATGACAAAAATGTTTTTGTCTTTCATCGAATCAATGA 11136 37 100.0 35 ..................................... AACTTGTCTTGCGGCAAGAACGCCGCAAGTTTTTC 11208 37 100.0 34 ..................................... ATTTCATTTTCCTCTTCCTCCCTATCCAAGGTTT 11279 37 100.0 35 ..................................... TCGCCGCAGTTGTCGCAAACCTTCACCGGCGCTTC 11351 37 100.0 36 ..................................... GCTGGTCAGCCAGGTGTAAGCCTCCCGGAGCGTGTC 11424 37 100.0 35 ..................................... CTTTAGCCGCTGTTCGTGCATTGCTTGCACGTACT 11496 37 100.0 34 ..................................... TCAGGAAGTCGTCATAGGTAACTTCCCTGCCCTC 11567 37 100.0 34 ..................................... TCAGGAAGTCGTCATAGGTAACTTCCCTGCCCTC 11638 37 100.0 32 ..................................... GGAATCCAGTCTGAATCTCGCCGTCTGCCTAC 11707 37 100.0 34 ..................................... TTTATCCGTTACGGGCTGTAACGCATCCCGAGGA 11778 37 83.8 0 ...................T...........CGCCC. | ========== ====== ====== ====== ===================================== ===================================== ================== 41 37 99.6 35 GCCTGAAAGATAGCCCCGAGATATAGGGGATTAAGAC # Left flank : GACCCCCGGCGCCTGCAGCGCGTACACCGCTATGTCAGCAAACACGGCCTACCTCTGCAATACAGCGCCTTCCTCCTCAAAGGGACCCGCGAAACGATTGAACGCACTCTCGCCGGACTTCGTCCCTATCTCGACGAACGCGTCGACGACGTACGCTGCTACCCCCTGGGGAAAGACACTCGAATCTGGGGCCTCGGACGACAATTCACCGACGGTCCCGCCGTCCTCACCGACGAAATCCTCGACCGACTGATCGTCGAAGACACGGCTCATGCACCTTGACCGATCGCCTCTGTCATTGCCCTGGCGGCTCGTCCTGCTTGCCAGTAGATCATCCATTCGCAGGTACTGCACGGATTGACACACCTCACATCCAGTGTCCATAATGCACACTAGACCTACATCCCAGACCAGCCCAGACCCTCAGCATGCGCATGGTCGAAAAAATTGCGAACCGCTTCATTAAGTCATTGTTTTTTAAAAATTAGTTTTAGGATGCA # Right flank : CAAAACCACCACAACCGAGTGCGATAGGATGCACCCGGAGCACAGGTGATGAGACCTTACTGGTTGAAGCTGGGCAGCTCTGTGCAATTTTTTCCGAACGACAAGCTTGTCGACCGGCGCAATTCTCCCGGACTATGCCAAAATTCGTTCGTCACTCATTACGGCCCATCTGTCATGCCCCAGGAACCAACCGATCCGCTGACCGAGTTCCCCCGCCGCATTCTGTTGGCGGTCACCGGTCTGTCGCCGCAGATCGTCACTGAAACGCTCTATGCGCTGGCGGTAAAATCCTCGCCGCGCTGGATACCGACCGAGATCCGCATCATCACGACCACACGCGGGGCCGACAACGCCCGCTTGCAGTTGCTTCATCCCAAGACCGGTTGGTTCCATCGCCTGCGCGCCGACTACCAACTGCCGGAAATCGCTTTCGACGAATCGCACATCCATCTGATCGAACGGCCCGACGGCACCCCGCTCGATGACATTCGCGACGACAC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTGAAAGATAGCCCCGAGATATAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.00,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 851943-854297 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBHP01000001.1 Tepidiphilus sp. J10 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 851943 29 100.0 33 ............................. TTTTTCATGGGGATCAATTGATTGAAAACAATG 852005 29 100.0 33 ............................. CATTCATCCACCGTGGAGGGGAACTCCTGCCAC 852067 29 100.0 32 ............................. CCGAGGCCAGCACGGATATGTTCCGCGGCGGC 852128 29 100.0 32 ............................. TGATTGAACGTGTCGGGCCAATGCGCCAGATC 852189 29 100.0 33 ............................. GCAAAGATTGCCGAGATTCGCCAGCACTCTAAC 852251 29 100.0 32 ............................. AGTCTGCCGCAACCGCGGCGGGAACCAGCGGC 852312 29 100.0 33 ............................. AATCGCCGACGCGACGGCGCAGGCACGGCAGGC 852374 29 100.0 32 ............................. ACTACCTGCTCCAGGTAAAAGCCGATCTGAGC 852435 29 100.0 32 ............................. CTCGATGTGCGCGCGGCAACCGAGCAGTATCC 852496 29 100.0 34 ............................. AACTGCGCGAGGTCGGCATCGACCCGCTTCTCGC 852559 29 100.0 32 ............................. ACGGCGGATTTCGTCATATACAAAAACTCGCT 852620 29 100.0 32 ............................. GCCGAGGGAATCGGGCGCCAGCAGCTGGGCGA 852681 29 100.0 32 ............................. CCGGTCACCGAGTACCTTCCGGTGCTGCACGA 852742 29 100.0 32 ............................. TTGCTAGAGGTGGCCGCGTGGCGGGAGATGGT 852803 29 100.0 32 ............................. CACCACGAGTCGCTGGCCGAGCCGCCCAGGCC 852864 29 100.0 32 ............................. AAGTCGAACGGCGACTTCCTGCGTGAAGTGGC 852925 29 100.0 32 ............................. TTGACCCATATGCTGCCCAGTGGCTGCGCAAC 852986 29 100.0 32 ............................. CAAACCCGATGCGCGGCTACAGCCTGATGGAT 853047 29 100.0 32 ............................. TCGGCGGCACACCCGACCATCATCGAGCAGGA 853108 29 100.0 33 ............................. GACGATGAACGCGCCAACCCTCCGCATCGCCGA 853170 29 100.0 32 ............................. GTACTGGCACGCGCCACGCTCGCGCCAGGCGT 853231 29 96.6 32 ...........T................. TGTGTTCCGCGCTCGGTGATATACGGGTTGAC 853292 29 100.0 32 ............................. CAGATGAACAGCAAAAAACCTACCAGCAAAAA 853353 29 100.0 32 ............................. GTGTATCCGGCACGCAGACGGCGCACGGGCAT 853414 29 100.0 32 ............................. GTGGAGGCGTTGCCGCAGCCATTGCGCGAGCA 853475 29 100.0 32 ............................. GAGCATCGAGGATGTGCACAAAGACGATTTGC 853536 29 100.0 32 ............................. CCACTGGGCGTTAACCGGTCGATCGATGAGGT 853597 29 100.0 33 ............................. CGGGCGAAGTTCAGCCGCAGCATCAGGTCACGC 853659 29 100.0 32 ............................. GCCGCCGTCCCTGATGCTGGCGATGCCAAGCC 853720 29 100.0 32 ............................. TCGTCGCCGTCGAGCCCGATGGTACCGGAGTT 853781 29 100.0 32 ............................. GTGGGCATGGCAACAGAAAGGGCTGAGCCCGT 853842 29 100.0 32 ............................. TCATTCTCGTCGGCCATCTCGGCCGCGATCCA 853903 29 100.0 32 ............................. AATTGCCATTTAATACCCCAGGGCAGGATCGA 853964 29 100.0 32 ............................. GCGGCCAGGTGGCCACTGAGGACGTGGAAGAA 854025 29 100.0 32 ............................. TGTGCAACCGCCTGGGCCTGACGGTCCGTTAC 854086 29 100.0 32 ............................. TTTTCAGGATTGTTCAGTGGTGCATTGCGGGT 854147 29 100.0 32 ............................. CCGCATAGGGAATGTGCGAATCCTCCCCGATC 854208 29 100.0 32 ............................. TGGGCATCCGCGACGCCAAGACCGGCAAGATG 854269 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ================================== ================== 39 29 99.8 32 GTGTTCCCCGCGTGCGCGGGGATGAACCG # Left flank : TGACGTGTTTCGCCGGACCAGACTTCTCGAGAAAATCATCCCGACCATCGAGGACGTGCTCGCCGCTGGCGGCATTGCACCCCCTGAAGCGGCACCCGATCAGGTGTTGCCGGTCATTGCCGACAAGGAGCCTTTGGGCGATGTTGGTCATCGTGGTTGAGAACGTCCCGCCCCGACTGCGCGGGCGCTTGGCCGTGTGGCTGCTCGAGGTGCGCGCCGGGGTCTACGTGGGCAATTATTCGCGCAAAGTGCGCGAAGAAATCTGGCGTCACGTCGAGGCCGGCATTGGCGAAGGTAACGCGGTGATGGCTTGGCGCACGAACAATGAGGCGGGTTTCGAGTTCGTCACGGTTGGTACCAACCGGCGTGTGCCTGTCGAGCTGGACGGCGTTCGGCTCGTCTCGTTTTTGCCGCCAGAGCAGGCGGCACCTGCCGAGGGTCCATCGGTAGGTTAGTAGAATGTCTGTAACCCATTTAAAAATATGGTGAAATGTGCAAGT # Right flank : GGCGAGGCAAGGCAGGCGAGGCGGGCAAGGCAAGGAAGGGGTTGTTAATCTCGCAGCAATCGACAGGGTGGCAGGCATGCTTGAATCGATCCTCTCTTATGCCAACGATCACGCTTGGGCGGGCTGGATGTTGGTGGGACTGCTATTTGCGCCGCCTATACTGATCAGCTTCATCCAGGGGGAGCGTGGCATTTCGCCTATCGGCACGATGTTGGGTTGGTGGGCGCTTGTTTTCATCGTTGCCCTCGTGTTAGCTTAGCCGCCGCGTGCGCTTCGCTCGGCTGAAAAGCCGGGCATGGCTTGAAACGTGCCAAACTCATGATAAGCGGCGTAGGGCTTACCAAATCCCACTGCAGCCTCGAAGGGGTCGGCTCGGTGCGTGCGCGAATTCAGCAGCTCGCCCGTACGGTAAAGGATGCTGCCGCGCCCCTTCTTGGCGCGCGGTGGTTGGTTTCAAGGGCGGCCAGGGTCGGCCTGCTATGCGCGCCATCGGTCAGGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGTGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //