Array 1 310455-309232 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849356.1 Acinetobacter sp. NIPH 758 acLZk-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================================================================== ================== 310454 28 71.4 27 ....ACT....AA.....AG..G..... TTAATGCTTAGCATTGATTGATATGTG 310399 28 78.6 91 ....TG.....CA......G.......T ATAAGGCTATTCTGATCTTAAGTTTTTACATTCGCCACTAACTAACAGATTTAGAAAGCCTTATTTTTTTTCTTTAAGAGTAACTTTGAAA C [310391] 310279 28 85.7 32 ...GT.......A..............G ACATTCAAAGAGGCTTAAAGAGATAGATCAAA 310219 28 75.0 32 ...C..T..TACA....C.......... ACCCTTTGCTAACATACGCTTTCTGACTTCTG 310159 28 96.4 32 ...C........................ AACCCATGCTCTAAAGCACATTTAACTTCTTT 310099 28 92.9 32 ..........A........G........ TGATCCCTCACGCTGCTGTGATGTGGTATTAA 310039 28 100.0 32 ............................ TTTATTACATGCCCCTTTTATATGTTGCTCAT 309979 28 100.0 32 ............................ TGTATCGATGTAATAGCAGTTATCACGCTTGA 309919 28 100.0 32 ............................ TAATCAAGTGACAGGCCAAGCAGAGCATGACC 309859 28 100.0 32 ............................ TACAGATGAGTTGGTGTGAAGCGTAGATAAAA 309799 28 100.0 32 ............................ TTAAAGTCATGGATAAATCCAACAGCTTTTAA 309739 28 100.0 32 ............................ AACAACGTGCTTTGACCAGCGATGCAATACAT 309679 28 100.0 32 ............................ TTCAGTGGAATGAGGGGTATGAATTTAAATGC 309619 28 100.0 32 ............................ TTCGCGATGCCAACCTTCGCGGTGCCGACCTT 309559 28 100.0 32 ............................ AATGGATGGTGATTCTGCCAACTGCCCAAACA 309499 28 96.4 32 .........T.................. TCCCAAGCCGTAGCCGAATGCTCTTTAACAAA 309439 28 96.4 32 ..........T................. GTGGCGATCTAAAACACGAATCTCTTTTAATT 309379 28 92.9 32 ...GT....................... ATACATTTGCAGCTCATACTCAGTGTGCTGGG 309319 28 100.0 31 ............................ GATGCCGTGAATGGTACTCAGCTTTTCGAAA 309260 28 85.7 0 CA.........CA............... | T [309254] ========== ====== ====== ====== ============================ =========================================================================================== ================== 20 28 93.6 35 GTTTGTCATCGTGTAGATGATTTAGAAA # Left flank : TTGCTGTTAAAACAGCGCTAAAGCAATTTAAATGTTCACCTAAATCTACTCTATTTTGAGGATAGGGCATGAAAGAGCAACCTGTCGTTAGGTTATGAACTTCATAATCGCCATTTGCTTGAACATTTTGATTGATAATGAATTTAGACATAGCTCTTACTCCTCACAAATCATAAGGGTTGAAGATAGATCTACGTCTCGCTGTATAGCAGGATGAGACAAAAGTTTGAAATGTTGTGCTATCATTTAGATAGTCCTCCGTAGTAATTGAACGCTGTGGAAATGGACACAAGGCAGGTATGAAGTTTGGTCACGGAATACCTGCTTTTTTTTATGCCTTTTCATAAATTAAGATATATTTGTCCAAAATTCTTGTCAAACATTATTTTTATTTAAATAAAATTTTACTATCAATCTTATCTAAGTATTAAGGATGATAATTTTTTAAATGGATTTTAAGTATTCCTGATTAAGATTTGTTATGATAGAACTCTTACATA # Right flank : ATTTCATTCAATGTCTAGGGCGACATATTTTGTCGTTAAAAAGTGGTATTAAGCTGATTAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTACTATATTTAAAATTTAACAATAAACTATGCATGTCATTTTCATCTCTGCTTGTGAAAAAAGAGCTTTAAAGAAAACAAGAGCGATCTTGGATAGCTATGCGATTCGTACAGGGCATTCGTCTTGGCAAGCACCAATGACAATGGAAGGTTTAAAAGAAATACGAAGCGCATTAAAAAAAGTCGCCACCCGACAAACTGCGGTAGCCGCTTACATTAATTTTGGTGTGCGAAGAATGAAGCTGGCATGGGTTGTGGGAGCAAAACATAAATTTGCCCATGACGGTGCATATCCAGTCGCTTCAACCAAGAAACAGCAAAAACTATTGATGCTAGATGAATGGGTCAAAATTAGTAGTTTGTTGGCAGGTGCAGCGGGGGATATGCATGATATTGGTAAGGCCTC # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.94, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTCATCGTGTAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTTGTCATCGTGTAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [9-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 316009-317896 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849356.1 Acinetobacter sp. NIPH 758 acLZk-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 316009 28 96.4 32 ............A............... TTACTACCCAGACTATCCATAAATTTGAGCAA 316069 28 96.4 32 ............A............... TTGTTAGAGTCACCGCCATCAACGGACATCGA 316129 28 96.4 32 ............A............... TATATGCCGTTTGTGGTCTACCACTCTGGGCC 316189 28 96.4 32 ............A............... AGGAATCTGGAGAGATCTAGAACATGAATAAT 316249 28 96.4 32 ............A............... AGTGCCATTGAAATTCTCCTATTTAATTTTTT 316309 28 96.4 32 ............A............... AAATTAATTAATGATAGAATCTAATTCAACTT 316369 28 96.4 32 ............A............... AATCACTCACTCCCTGATTACCTATATCCCTC 316429 28 96.4 32 ............A............... ACTCATTGCCCTGTACACGTCCACCTGTGGCA 316489 28 96.4 32 ............A............... TCCGTACCTTACCCGTGCCCCCAAGCTGGAAG 316549 28 96.4 32 ............A............... TGAACCATCTGTAGGCTTAAAATCAACAGCTT 316609 28 96.4 32 ............A............... TAAATGTGGCTCTTATTTTCACGTTGGATTTT 316669 28 96.4 32 ............A............... GCATTTAAGCGGCCGATCGTGTATTCAATTCC 316729 28 100.0 32 ............................ AAGCTCAATTGATTTTCAATCATGAGACGGAA 316789 28 100.0 32 ............................ TGTTGCCGATCAGGAAGACGGTAGCAATCAGA 316849 28 100.0 32 ............................ TTCAACACCGCCTGAAACTGATGGCGAAGGAC 316909 28 100.0 32 ............................ TTGAATCGCTTCTTGTGGAACTTGACCATCTG 316969 28 100.0 32 ............................ ATGTCCGACTTTGAATCAGATCGAGGCAGGTA 317029 28 100.0 32 ............................ ACGAGAACCATCTGGATGCTTTACGCCTTCCA 317089 28 100.0 32 ............................ ATAAAAACAAAATCACCCATCATCACATCAAT 317149 28 100.0 32 ............................ ATATTTTGAAGATCAGTTCGCAACATAGAGCC 317209 28 100.0 32 ............................ ATTATCAATTGATTTCTCCATCCAATCTAATT 317269 28 100.0 32 ............................ TCTTTCGCTCAGATTTAAATCTTTCAGAAGTT 317329 28 100.0 32 ............................ AAGTTCAACAGAAGCAATGCCCGTAAATCTGT 317389 28 100.0 32 ............................ AGAATTTATCATCCGAAAAGTACCAATATGTT 317449 28 100.0 32 ............................ ATTTTGCGCCTGTTTAACCTCTATTTCTTTTT 317509 28 100.0 32 ............................ TCAGGTTCTGGCGTAGGTTGAGGCTCTTCAAA 317569 28 100.0 32 ............................ AGTTTGCTAATAGCTTGAGTGCAAATATCTTA 317629 28 100.0 32 ............................ AACAAAACAAAACCAAGTCCAGCTAGGCCAAC 317689 28 100.0 32 ............................ ATCTAAAAAAATATTGGCTGTATTTGCTGTTA 317749 28 100.0 32 ............................ TGTGCGCTGTAATCTGGCTTGATGTACATGTT 317809 28 100.0 32 ............................ TTCGGCCCCAGTTGGGTTCCATCGTTGCTCTA 317869 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 32 28 98.7 32 GTTCGTCATCGTGTAGATGATTTAGAAA # Left flank : TCGTTGGGCCAAAGCGTTATATAAACAGCTTGCTAAAGGCTTTAGCGTCGAATTTACGCGTGATGAAGGAAAAAATTCTCACGACACTATTGCTGATATCGCCAACAGCTACCTTGATCATGGTAATTATATTGCCTATGGCTATGCAGCAGTGGCTTTAAATGGCATGGGAATTAGCTTTGCTCTCCCTATTTTGCATGGTAAAACACGTCGCGGAGGTTTAGTCTTTGACCTAGCTGATCTCGTGAAAGATACCTTTGTGATGCCACTGGCTTTTACATGTGCCGCAAAAGGATTGAATCAAAAAGAATTCCGAATGCAGCTTATCGAAACCTGCCAAGATCAAGATCTTTTGGATTACATGTTTAGCTTCATTACGGACATATGCAGTAAAATCAAATAAAATCATATAATTAAGATTTATACCTCATAACGAAGTATTTTCACTCTTTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : AGTTCAATCAAAGCGTCCACGTTTTGCA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGTGTAGATGATTTAGAAA # Alternate repeat : GTTCGTCATCGTATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGTGTAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1444184-1444871 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849357.1 Acinetobacter sp. NIPH 758 acLZk-supercont1.10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1444184 28 100.0 32 ............................ TGGCTTGATGAAAAAGATCGAGAAACGAGCAA 1444244 28 100.0 32 ............................ CAATCGGCACATTATCAACTTTCTTAGGTGCC 1444304 28 100.0 32 ............................ ATTCGCTGTCATCTGGCGGATCATTGCATTCC 1444364 28 100.0 32 ............................ AAGCATAAGCGAAACACAGGCATACGTGCCTG 1444424 28 100.0 32 ............................ CAACAGGTTTTCTCAGACGATGAGATCATTAA 1444484 28 100.0 32 ............................ TAGTAGATGTTTTGGGACAATTTCAGGCTCGT 1444544 28 100.0 32 ............................ ACCTTAGCGCCCGCAGTAGAAAGAACCTTAGC 1444604 28 100.0 32 ............................ AGAACGTGATAGCACCATCCTTAATGCGATAG 1444664 28 100.0 32 ............................ ATTACTCAAAGATGCAGTAAAAGGAGTTGAAC 1444724 28 100.0 32 ............................ ATTTAGAAGGAAGTCTTGAAAATCCCAGCCTC 1444784 28 100.0 32 ............................ AGCATAAACCTGATTTTTATTTTGGTGTTGTT 1444844 28 82.1 0 ....................A...TGTT | ========== ====== ====== ====== ============================ ================================ ================== 12 28 98.5 32 GTTGACTACCGTATAGGTAGTTTAGAAG # Left flank : GAGGTAAATGCAATTTGGCGTTGTAGATTACTCATCTCAATGGTGTCGGCATCGACAATGGTAATTTTCCCCACCCCAGCACGCGCCAGTAGCTCAGCACTGGTACAGCCGATTCCACCTGCGCCGATAATCAGTACATTGGCAAGTTTTAGTTTTTCTTGTGCTTCAATATCCCAACCATCTAATAAAATCTGACGACTATAGAGATGCATTTCCTCATTACTAAGCTCAAATTCGTTTTCAAAATGGTCTGACACGTGGCTACTTCTTTATCTTCAAGATAGTGCTGATTCTAAGTCGATGCTGGACTTGAGGAAAGTAATAAATTTTAACTATACGAATTTTCTTTCGACCAAGCTTTGTTTTTACCCCAACAATTCGATTGAACTTTAATAGCTTAATAAAATCAAAAATTTATAATATCGACTAAAACTTAAGGTATTTATCCTTTTTTAATTATAACTTTATGTTTTAACGTAAGTTATCTATTATATTTTATA # Right flank : TCGCCCATATAAAAATGACCTTAATTTTTTTGAACGATTAAGGCCATCATTGCGATGATCAGGCAACGATACTTAAAAATACCTTAGCCATAAATTTATCTATCATCCATTATTTTCTAAAATTCAAATACACTTAAAAACACTACTTCCGATCATGCATCATTTCATAAGATTGCGCTCTTAACACATCCTCTTTAGTTCCAAAGGATTGATTACGCAACTGATTAATCGACTGTTGTTTACTGGCATCACTCGCATCACTTTTTAAAATCTGGTCGCGTTCAGCCAAATAACCATTGACCTGTGTTTGCCAGCCTGCCTCTTCCTGATCCACCTTTTCGAGACGATCCGCAGCTTCTGGCCCTAACAGACTTTCACGCATATTACGAAGCTCTTGTGCAGAACCACCTTTCTCACGGATCTCCTGCGTCAATTGCTGTAACTCAGCAAATTGCATAGAAACCCGAACACCATCCGCCATCGTACTAGGAAGCTGATCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGACTACCGTATAGGTAGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTGACTACCGTATAGGTAGTTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 42-429 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849359.1 Acinetobacter sp. NIPH 758 acLZk-supercont1.12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 42 28 100.0 32 ............................ TTTGACACCACCACGCAGCCTTCAAGCTTTTC 102 28 100.0 32 ............................ TTCAGGCTTTGGCATCGTCATAATTGTGTAAA 162 28 100.0 32 ............................ TCTGTATAAGTCTACTTGTTTTGACATTGATG 222 28 100.0 32 ............................ AATATATTCCAAGAAAAAGATTAAGAGACAAA 282 28 100.0 32 ............................ GATCAAATGAAGCTAAAGCACTGGGCATAAAA 342 28 100.0 32 ............................ AAAACCAAAGTGGTAAAAATTTTTAACCATGT 402 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 GTTCGTCATCGTGTAGATGATTTAGAAA # Left flank : ATTTAGAAAATCTAAAAAAATATTGGCTGTATTTGGCCAACG # Right flank : AGCTGGGAGCAAAAAACACCGTGGGGAATCCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGTGTAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGTGTAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [50.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 6741-7548 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849359.1 Acinetobacter sp. NIPH 758 acLZk-supercont1.12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 6741 28 96.4 32 ............G............... CTCCACGCATGTGTGTGTCGGTGATTTTTTTA 6801 28 96.4 32 ............G............... TGAAAAGATCAGCTACAACAAGACTAAATACC 6861 28 100.0 32 ............................ ATGGAATGAATCCCCCCTGCTGTCCTGTCACC 6921 28 96.4 32 .C.......................... TTATCCCTGTAATTGGTGGTCAGAAACAACAG 6981 28 100.0 32 ............................ GTACTGATAAATTTATGGATATCACAAAAAGA 7041 28 100.0 32 ............................ AATCCAGTTTTGGATCAAATCAATGGATGGAA 7101 28 96.4 32 ....T....................... TGAATCAATGACGAATGCTCACGGGCCAATGT 7161 28 100.0 32 ............................ CTCCCCCACTCTGACAATATATCTCTAAACGT 7221 28 100.0 32 ............................ CAAAGGAAGTAAGTCATGAAAAAATCAATTCA 7281 28 100.0 32 ............................ AATTTCGAAACAGAAAGGATCGTTGAACTAAT 7341 28 100.0 32 ............................ AATATCGACCAGAAATATGCTGCATATGGGAG 7401 28 96.4 32 ............G............... AACTTCAACATATCAGGTTTAATTGTATCGTT 7461 28 96.4 32 ............G............... ACAAATTATCTTGACGCTGTTGATTAGCTTTC 7521 28 92.9 0 ............G...........A... | ========== ====== ====== ====== ============================ ================================ ================== 14 28 98.0 32 GTTCGTCATCGTATAGATGATTTAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAGATGATTTAGAAAAAAGTAAGTCTTAAAGATGATAAAGCGATCTT # Right flank : ATCAAGTCTTTAACGCCCTTGCCTCAGCGATATTATGCTGTTCAACCAAAGTACGAATCGTATATTCATGATTGGTTTTTTGGTCACAGGCAAATTCACATTTTTGATCCAACGGCAACGCACTCCCCCCAAGCAATGGACAGCCTGCAAACAGCTCTGCTACCCAATCAACAAAGACTCGAACCTTTTGCGATAAATGTCGACTCTGTAAATAAACCACCGAAATTGGCATCGGTGCAGGTGTCCATTTTGGCAAAACTTCTTTTAAGCTTCCTGCCTCAAAATGATTGGTCAGCATATAACGTGGGCCTTGGATCAAACCAAAGCCTTGCAAGGCCAAATCAATATAAGCATCACCATCATTGACTGAAACATGTCCATTGACACTGACACTTTGAATCAGATCATCGACCACAAAATCCCAGTCAAAATTACGCCCTGTGCGACTAGAAAAGAAATGAATGGCTTGATGATTCTTTTGCAAATCTTCAAGTGTTTTC # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGTATAGATGATTTAGAAA # Alternate repeat : GTTCGTCATCGTGTAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGTATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //