Array 1 8116-9115 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIWT01000009.1 Campylobacter sp. RM16191 contig00009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 8116 29 100.0 36 ............................. CCGCGCGATAGATAGCTCAAAGCGTCTATTTTCTAA 8181 29 100.0 37 ............................. TCAAAAAGGTAATCAATTTATAAATTTAATCAACGAT 8247 29 100.0 36 ............................. TATAATCGTTCCGATGTTAAATCTTCAGATTTTGGA 8312 29 100.0 36 ............................. CCTATTTTTTCAACTGTAGCCCTTTGTAAATTTAGG 8377 29 100.0 34 ............................. ATTTTTGATATTTTTCTTCAAGTTTGGCTTTTTC 8440 29 100.0 36 ............................. ATTCGCTTGAAGTCCATTTGCCGGCACCTACTCCGT 8505 29 100.0 34 ............................. TCTATAACGGTTTGCGTGTTTTTTTCGATTTCCG 8568 29 100.0 37 ............................. TGCTTTCAAGATTTAACATTATGCAGCCTCCTTGACG 8634 29 100.0 36 ............................. TATGAGGGGGCTAACTCTATTGCTGATGGACTCAAA 8699 29 100.0 37 ............................. TGCTCATTTGAGCTATTGGTCTTTCAAACTCATACAA 8765 29 100.0 37 ............................. AAAAATTTCAACAAACACCAATCCTTGATTTTTTTCA 8831 29 100.0 37 ............................. TCTTTAGAAACGTCAGCACCTACAAAAAAATCTTTTT 8897 29 100.0 33 ............................. GAAGAACACGCGATAACCGATCACTTTGACGGG 8959 29 100.0 35 ............................. TTTGATAGGAAAAACATCGCTTTTTTTGTTTTATG 9023 29 100.0 35 ............................. TGCCACGATTGCATTTTAACCCCTGATAACATTGA 9087 29 86.2 0 ........................T.CTG | ========== ====== ====== ====== ============================= ===================================== ================== 16 29 99.1 36 GTTAGAATTTGCCTTTTAGGCTTTGAAAC # Left flank : GAAATTTATAAGACCGAGCTTGATCCTAGGATTGGTTTTCTGCACGAGCCAAACTATCGCTCTTTAAGCTTGCATCTGGATTTGGCTGAGATTTTTAAACCTATTTTAGGTGATACTCTAATATTTTCGATGTTGAATAAAAAAGAGATTACTGCAAAAGATTTTGAGACTAATGCCGGAAGAATAAAATTTACAAATGATGCAGTGCAAAAAATAGAGATGAAAATGATATCTAAATTAACGGATCAGATAGAAGCAGGAGGACAAAAGCTTACATGGAGACAGATTATTCGCAGAGAAGCAAACCGGCTTAAAAAATGTATATGCGAAAATGCACCATACGAAGGTTTTGTATATCAATAAAGCTTTGCTTAAGATTTTAAAATACTCGTAATTTTGGGCCTTGCGTATTTTAGCAATATCAATTTTAATTTATTTATAAGGTAAATGCATATAAACTTTTATCTACAAACTACCTTGTAGTTTTATATTTGAGTGCT # Right flank : GAATAGATAAAAATAAAAAACAATTTGGAGGTAATTAAAGCATGACTTTAAAAGAAGTGAGTGAAATAACACAAATACCTTATTCAACTTTGGCATATTGGAATAGATGTAGCGACTATAAAAAGAGCCTCATAAATTTTCTAAAAGCTAGTGATAGATCAGTACTTTTAATGTATTTTCAAGAAAAATCGCACTCTAAAAAAGGTGCTAAAATTTCTATTTATAATTTTATTTTTTGAATTATCATTGTTTTTAAATAGAAAATTTATGTATCGGATAAAACTTGACATATTTGAGATTTTATATATATTTTAAATTTTATTCATATAATATTATTTTAATTTGCTATCCAAAGGTATTAGATGAAAAAAATTTTAATCATCGCGGGCTCTTGTAGCAATGGTGGAGCTGGAATTCAAGCTGATATCAAGGCTTGCTCACATTTTGGTTGCTATTCAGCTACCGCAATCACAGCACTAACTGCTGAAAATTCCAATAAG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGAATTTGCCTTTTAGGCTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.10,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //