Array 1 111329-111710 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCYS01000053.1 Vibrio breoganii strain 10N.261.49.E4 10N.261.49.E4_contig_21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 111329 36 100.0 33 .................................... TTTGGAAAACGTTGCTTTCATCCCACCCTTTAA 111398 36 100.0 34 .................................... GAAAGCCACCATTCCACGCTGCGCCGCTATCATT 111468 36 100.0 33 .................................... ATTATTACCGCTGTTTTGAACTCAACAACAGTG 111537 36 94.4 32 ............G...................T... TGCTGCGCTGCATTTGGGGCATGGCGGCTAAT 111605 36 88.9 34 .......AC..A....................T... GAAAGCAGGAATGTCGTAATTAACCCCTGTAGCT 111675 36 86.1 0 .......AC..A....................T..T | ========== ====== ====== ====== ==================================== ================================== ================== 6 36 94.9 33 GTCTGAACTTCGCCCTGTTCTTAAAGGGATTAAGAC # Left flank : GGATCTTGTGTTACGACATTTGCGATGCAAAGCGCTTGCAAAAAATGCATCGCCTCGCTTGTGGATACGGAGTACCTATGCAGTACTCGGTATTCCTAATCCAACTAAGCCAAGCACAACTAACACAATTGGCAAAGGATATCGAAAACACCATAGACAATAAGGAGGACAACGTGAAGATTTACCCGATCAAACATATACCCAAAGAATATCTTTCCGATATTGGTGTGACCGTGACTACAGATGGGCTTATTCTGACCTAAACAACCAAGGCACCATTATATTCAATGTGATATTAAGAGCAGGTTAAGTAGGCAAGGTTCACAAATTCAGTGAACTACCGCTCAAAAATCATTAAAAACAGTAGCTTAAAGCAGGATCATTGAGTTAAGCTACCCCACGGTCAAGCAACGAAATAATCGTCAAGTTTATGAATTTGCAACTCTTCGATAAGCCTAGTTTTAATCTATTGATTTGTAAGGTTTTTTAGGGGGCTTGCT # Right flank : TTTTATGACCCTAGGCACTAGGACCTAGAACCTAGGTTCCCCCCTTCTCAATCAAAGAATAAACCCATTAAGATAAGGCAATGCACTCCCTATCGTTATGCCAAAGACCAAGCCCCATATCACGCGAGTATTCTTCTCACCGTACATGTGTTGAATTTGGCTTTGAACTGCCTTGAGTTGGTGGTGGTGTTCGCACTTTTGCTGTTGCATCTCCTCTATCAGCCTGTCGCGTGCTTTTAGCTCATATCGCAACGCCGAAATAGAACTGCTACAGTGACACTCTTTGGTGTACTGCTTTATGATTTGGAGTTGCGCATAACTTTCACAACCCTTGCCTGCTAGTACCTTATCTTGGGCAATCTTAGTCAACTTAAACAATTCATCGCTAGGCATTGAACCTTTATCCGGATGAAGCCTATTTGCCAATAGCCTGTAGCTTCTTTTTATCTCCAGTTTTGTTGATGCATCGCTTGTGCCTAGAATTTGATGAAAAGTGCCCA # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAACTTCGCCCTGTTCTTAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 113736-114118 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCYS01000053.1 Vibrio breoganii strain 10N.261.49.E4 10N.261.49.E4_contig_21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 113736 36 100.0 34 .................................... CTATGGATGCGATGAGGACTCGTCCGGTTTTTTC 113806 36 100.0 33 .................................... ACGAATCACGCCGAACACCCACACTCATCCACA 113875 36 100.0 33 .................................... GTCATAGTGAGAAGACATTGACAGGTAAAAACC 113944 36 100.0 34 .................................... ACTCATCGGCTGACCTTTTCGCATTCGCCTCTCA 114014 36 100.0 33 .................................... CAAAAGCAAAGAATGCGCCACATTCGGTCATTA 114083 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ================================== ================== 6 36 99.5 34 GTCTGAAACTCGCCCTGTTCTTAAAGGGATTAAGAC # Left flank : TTGAACTAGGACGACTCGATTTATACGACCAAACTATTAGTTCAGAGAAAGCTGTGGAGCTTTATTTGATGATGTTTAAGGCGCTCTTGATTCTCTTTGGGTTTTACCTATTTTCAATAGGCCTTGAACGTTTGGCGATTCGCTATGCCCTCTATAAATACAATCAAGTGAGGCAGGAAAATGAAAATCTCACCAATTAAACCTATGCCTAATCTGTCCGATATTGATGTGACCGTGACCACAGCTGGGCTTATTTTAACCTAAGGAATAAGCCCCCAAGGCACCAAAATATTCAATGTGATAATCAACCTTAGGCAAGGTTCACAATTTCAGTGAAGTACGGCTCAAAAATCATTAAAAACAGTAGCTTAAAGAAGGATTATTGAGTTAAGATACCCCACGGTCAAGCAACGAAATAATCGTCAAGTTTATGAATTTGCAATTCTCCGATAAGCCTAATTTTAATTTATTGATTTGTAAGGTTTTTTAGGGGGTTTGCT # Right flank : CAATCACCTTTAATACCCACAACAAGCGAACGTCTGAAACTCGCTCTGTTTTTATCCACTCCTCTATTCTGACCTTATGGCTTATGGCTTATGGCTACAAATGTGATCTCCCCCTAAGTCAAAAATTAAAAAGTTATCAGCATAAAAAAAGCCGACTTTTAAAGTCGGCCTTAGTGGCAAGCACTTGGTTAATTTACCTATACCTAAAGGTAATATTGGATGATTTTATCTTCAGCCCCTTCGGTGTTTTTCAAGTTA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACTCGCCCTGTTCTTAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //