Array 1 1380994-1379562 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP038281.1 Raoultella ornithinolytica strain WLK218 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1380993 29 100.0 32 ............................. GCTAGCTGGTCCGCCTGCTGCTTGATAATCCC 1380932 29 100.0 32 ............................. CACGTTTGAACGTGGCGACAAAATCCGTAGGG 1380871 29 100.0 32 ............................. CTGGGCGACAACGTTCTCGACTTTACGCTGGA 1380810 29 100.0 32 ............................. GTGTACCCGGAATCTTCGCACAACTTAATAGC 1380749 29 100.0 32 ............................. GAGTTACTGACAATGGATTTGCGCCAGTATGA 1380688 29 100.0 32 ............................. CTTGCTATATTACGACTACCGAGCACAGTTCA 1380627 29 100.0 32 ............................. TCATCACCCGGGAAACTTACAGGAACGTCCAC 1380566 29 100.0 32 ............................. GAAAGGTGTCACATCACCCGGGACGCTCGCCA 1380505 29 100.0 32 ............................. TAATGCTTCTGAGTATGCGAAGAACAAATTCA 1380444 29 96.6 32 ..A.......................... ATGGTAAGCAGTGGACTACGTCCAGTAAGAAA 1380383 29 100.0 32 ............................. CTGACGTTGAGGAGAAATATAAGCCATGAGCC 1380322 29 100.0 32 ............................. GATGGAATTGTCATCACGGATGAACTGTTTGA 1380261 29 100.0 32 ............................. TCGCCAACAAACCATAGATCGCCTGACGGTGT 1380200 29 100.0 32 ............................. GCTATCATTCCATGCACCGTTGCTGTTGTCGT 1380139 29 100.0 32 ............................. CAGGATAATCAGTGCGCCTTTAATAATGCCCA 1380078 29 100.0 32 ............................. TGTCGTTAAGGGTTCTCGCGTTGCTCCATATG 1380017 29 100.0 32 ............................. TTCCATTACCCATCCAGGCATCTCTTTGCTCA 1379956 29 100.0 32 ............................. TAATGCGTCCGGGAATTTAACGGTATCCTCGA 1379895 29 100.0 32 ............................. TTGTCATCGTTCGAGAGCACCGTTGCCTTGAG 1379834 29 100.0 32 ............................. TATCATTTTACCCTTGTAGTCAGTTCATCCAG 1379773 29 96.6 32 A............................ AATCAGGGCGACGCGCTCTCGCGTGTGGTGCC 1379712 29 100.0 32 ............................. CTGATTGGTTATGCACGGGTGTCCACCGGGGA 1379651 29 96.6 32 .............T............... GTCCGTGTGCGCGGAATATTCCCGGATGCGTC 1379590 29 93.1 0 A...........T................ | ========== ====== ====== ====== ============================= ================================ ================== 24 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTATTGAAGAGGTTCTTGCCGCGGGGGAAATCCAACCTCCAGCTCCCCCTGAAGATTCGCAACCCGTTGCGATCCCACTTCCTGTCTCGTTGGGAGACTCTGGCCATCGGAGTAATTGAGGATGAGTATGCTGGTTGTTGTGACTGAAAATGTACCACCGCGACTGCGAGGAAGGCTGGCTGTCTGGCTACTGGAGATTCGTGCTGGGGTGTATGTTGGCGATATTTCGGCCAAGGTCCGCGAGATGATATGGCTACAAATCTCCGTTTTGGCGCAAGAGGGAAATGTCGTGATGGCATGGGCAACGAATACTGAATCAGGATTTGAATTTCAGACTTTCGGTGAAAACCGACGTATTCCGGTAGATCTGGATGGGCTGAGACTGGTGTCATTTTTACCCATTAAAATTCAATAAGTTAGTGTTCTTTAAAAATACGGAAAGTTTGGTAGGATTGAGTGTGTTGAAAAAAGTCTTTTAGTTCAGTTGCATAGCGTTAGA # Right flank : CAGCGCTGTATTACTGCCTGGTAACGCAGGGATGTGCACCTTCCCCGTAACAGAAAACGCCGGCTAGCCGCGCTTTTCCGCCTTTGCCAGCTCTTTTATCAGCGGCAGCATCACCTTGACGACATCGCGGCTGCGGTGTTCGATACGACCCGGCAGAGCCTTATCAATATGCTGCTGGTTATCCAGCTGTACGTCATGCCAGCTGGTTCCTCGCGGGAAGGAGGCGGATTTGTTGCGCTGTTGATAGCCATCTTTCTTACCCAGAGACCAGTTCGTGGCCTCCACGGACAGGACCGGGATCCCCGCGCTATCAAAAATGCTGGCGTCATTACAGCAGCCGGTACCCTGCGGATAATCATGATTGAGGCCAGGGTTGGTATAGGCGGCAATCCCTTTGCTGCGCGCAATAGCCAGCGCGCGGTCTCGGGTGAGTTTGCGAATCGAGGCGGGAGTGCTGCGCCCGCTATTAAAATAGAGCTTATCGCCAACCACCAGATTAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //