Array 1 592314-593257 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJGVV010000001.1 Escherichia coli strain PLATE1_C7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 592314 29 100.0 32 ............................. CACATTTCGCAAGACGCATACGGAATCGCGGC 592375 29 100.0 32 ............................. ACTTCAGGGATTTCCAGATGATCACACACTGA 592436 29 100.0 32 ............................. GTGTACCTGCGCAAAAAATAAGCGGCGGCAAA 592497 29 100.0 32 ............................. CGTGTTTCCTGGAAGGACAGCACCATCTGAAG 592558 29 100.0 32 ............................. GCGAAAGCCCAGCGGAGATTCATCACGTCCGC 592619 29 100.0 32 ............................. CCGAAAATACACCTAAATCAGCAGTTATCGCT 592680 29 100.0 32 ............................. AAGTATTTCCGTGCACCGTGGGAGGCGTTTTG 592741 29 100.0 32 ............................. CGCGGGATACGCCGGTTATATCACTGGTAGTG 592802 29 100.0 32 ............................. TAGTTGTGCTGATTTTTGATGGATGGTTATAA 592863 29 100.0 32 ............................. GAACTTGCTTACCTTTGCTGTGCTCGTCAGAA 592924 29 100.0 32 ............................. GGCGTTGGTGGCTGGGGCCGCCCGGTTGTTGA 592985 29 100.0 32 ............................. CCTCAACTTCAGACAGAAATCGCTGGTACGTA 593046 29 100.0 32 ............................. TCCGGCGAGCTGGTCACCTGGCTGAATAAATT 593107 29 100.0 32 ............................. GAAACTGAAATCGCGGTTGATAACGCTGATAT 593168 29 100.0 32 ............................. GGTAAAAACACGGTCTGAACCGACATTCATGT 593229 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ================================ ================== 16 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCCGCAGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGCGGTCACCGGGGGCACGGCGGATGAGTATGGTCGTCGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTTGAAGTGCGTGCCGGTGTTTATGTCGGAGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTGGTAATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGTTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTGCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATACCGGCTTTGTCGAATATTTCTGCGTCATTACAACACCCGGTGCCTTTCGGATAGTTTTTATTCAAACCTGGATTTGTGGTGGCGGCAATTCCATGGCTGCGGGCAATTGCCAGCGCCCGGTCGCGCGTTAATTTCCTTACTGCTTCAGGTGTTTTTACGCCACTGTTGAAATACAGCTTATCGCCAACA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //