Array 1 164668-160729 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL810966.1 Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 strain ATCC 19606 scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 164667 29 96.6 31 ............................G TAACGCTGGTACTCTGTACGTTCTACGTTAA 164607 29 100.0 31 ............................. TCAAGAGAAGTTTTATAGTGTTCGTGTATCT 164547 29 100.0 31 ............................. TTCACTGGATTACGTTCTAAGCCTTCCTGAA 164487 29 100.0 31 ............................. ATAAGCCTTATGAGGTAGATACTTCAAAAAT 164427 29 100.0 31 ............................. ACTCGGTCACAAGGCGTAGTCTACGGTTTTT 164367 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 164307 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 164247 29 96.6 31 ............................G GTACAAGCCATCACATGTATCTGCTAGTTCA 164187 29 100.0 23 ............................. ACACATGCCAGATGGTTCAAATG Deletion [164136] 164135 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 164075 29 100.0 31 ............................. GTAGGAAGCTCTACATCTAGTTTTAAATAGG 164015 29 96.6 31 ............................T ATGAGTGAGGGAGTAGCAAATGTCTGAACAA 163955 29 100.0 31 ............................. AGAAAGCTGAGCAATTGCCTGCTTTGCCTAT 163895 29 100.0 31 ............................. ATCCCATTAAAGAAATCATTTTGGTCTTGGA 163835 29 100.0 31 ............................. AGATCAGAGGCACCAAGCAATGCAGACTCCC 163775 29 96.6 31 ............................T TTACCCTTGCCATGCTTGCCAGAATTAGAAT 163715 29 96.6 31 ............................T ACCACCCATTGAACGTTAGCCATATGAGCAA 163655 29 96.6 31 ............................T TCCATGCTTCACATAGAAATTCATTGCAAGT 163595 29 96.6 31 ............................T ACTGCTTCCCAAGTCAGTAAAATGATTGTTA 163535 29 100.0 31 ............................. CAGTAGTATCATTTCAATCGAGTAACGTTGA 163475 29 100.0 31 ............................. AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 163415 29 96.6 31 ............................T ACACGGCGATCTTGTTTAATAGTCTGAGTTT 163355 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 163295 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 163235 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 163175 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 163115 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 163055 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 162995 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 162935 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 162875 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 162815 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 162755 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 162695 29 93.1 31 .............C..............T TTTGTTTATACGGTTAATAAATCAGTACAAT 162635 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 162575 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 162515 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 162455 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 162395 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 162335 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 162275 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 162215 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 162155 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 162095 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 162035 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 161975 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 161915 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 161856 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 161796 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 161736 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 161676 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 161616 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 161556 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 161496 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 161436 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 161376 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 161316 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 161256 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 161196 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 161117 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [161091] 161057 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 160997 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 160937 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 160877 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 160817 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 160757 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 66 29 94.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCAATTGAACTGATAAAACAAATAATTGTTTTTTAAAGTTAATTTCAATTCAAAAAATAACAGTGTACACAATAGTGTACAAATTATTTGTTACTAGGGCATTTCTCTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCTTTTAGTGGATCGGATTATGAGGCTCGTTATTTGGCTTCAATAAATTTATTGAGCGCAAAACCATATTTGGTGATTGGATTTTAAATCTTGAATTAACTTAGCCGTTCAAGTGGCTGATTAAGTAGCTTGGTCGCGTTTTAAGTGTGAGCAAGTTATAAAAATCACGAAATACTTTCGATTGCAGATACGTGCATCCAGTCGCGTGTACATTGCCGAAGTTGAGGATTTAGATGGTGGGGGGTATCCCTATGTTCAGGTTATTTGCAGAAGTAA # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.52, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [50-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //