Array 1 40-251 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMDH01000071.1 Streptomyces sp. LamerLS-31b, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 40 29 100.0 32 ............................. TGAGCATGGTGCAGACGGTCTTTTCGCCGGTC 101 29 100.0 32 ............................. ATGCCGAGAACACGATTGCAGTCTTCGCAGAG 162 29 100.0 32 ............................. CGGGCAATGGCCTGGTCCACGGTCCGCTGCTC 223 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 100.0 32 GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Left flank : TAGCTCCGCCCATCTCAGGCCCCACACGAGGAAAACGACG # Right flank : CGGCCTTAGCCATGACGGGGTGTTTGTAAGCACTTCTTTGGGCACCAGCGCACCAGCGTTTCACGGCTCCATGACGTACGAAGTTGATCTGGCTCCACCGGTATGACAAGACAGTTCAGGCCAGGGTCAGGAGCGCCTGTGCATCGCGTCTGGGGCGTGATCGGATAGGGGATGACTTCGTTCTGAACTGGTAACGGGTACGTTTGCGCGGTATCGAGCCCGAGGACTGGACGGCGTTCGGTCGTCGGGCCCTCAACATCGCGCTGAAAGTCGTCTCGGTCGGGCACGTCAGAGGAGCTGGAGCACCTCGGCCAGCGCGCCGGGACGCTGGTCAACGGGCAAGGGATCGACTAGGTGGACCCGGCACCCCAGCGTGGCAGCGCCGGAGTCCGCAACAGGCTCGTCTCCCACCATGAGTGCATCGCCGGGTGCCACTCCGAGCTTGTCGCACGCCATCTGGAAGATCCGGGGATCGGGCTTCTTCACCCCGCGCTCGAAGG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCCGCGGGGGTTGCTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-13.20,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 499-29 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMDH01000137.1 Streptomyces sp. LamerLS-31b, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================================================================================================================= ================== 498 29 86.2 32 ...........A.G..........AG... CGGATGCGTCCGGGCTGGAGGTAGCCGGTCGC 437 28 86.2 169 A................-.A........G GAGTGGAACAGACTCTGGCCGGCAACCACCATGCCCCTGGCTTCGGGAAGTAGTTCCGGCCGACCCGACTGGCACATCAGCCTCACCTCGTCGCCCGCGAACGCCCGAGCCGACGAACGAAGTGAAGGAAAATCGTCTGGTCGCGCGGCATCACTGCAGGTCACCAAGT 240 29 96.6 32 ............................G CGCTGTGCGACGACCCCGACATCTACGCCATG 179 29 100.0 32 ............................. TCACCCTCGGGGCGGTGCGGGGCGGGGCGGCT 118 29 100.0 32 ............................. AGATGGGTCGCGATCTCCCTCGCGGACGGGTC 57 29 79.3 0 ......................GTAGCT. | ========== ====== ====== ====== ============================= ========================================================================================================================================================================= ================== 6 29 91.4 60 GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Left flank : CGACAACGCGCATGATCACACCAAGGCCGCACCGCTGTCGCACCAGCCGTCGCTGGTCGGAAAGCCTTCAACCCGCCACACCACCAAGGACGTTAAAGAACAAGCTCACTGGAACACCCCTGCGTCGGCGGGGAGGACTGCCAGCGCACCCGCCAGGGGGTGGTCATCGACGCCGCCTTCACAGCGCGGCGGGCCGCCGAGCGGATCCGTGACGAGCGCCGGGTCAGCGCCCGCCGGCGTCTTCTCGTGAGCGAGGAAGCCGAGAACGGGGCCGGCGCGGTCTACGACAGCGTGCTGCGCCGGCAGCCTCGCGGACACCAAGCCGCGGAGAGGGCCGCTGATGAGGCCCGCCATCGCACCGCCGATTACCTGCTGCGCCAAAAGCTCGGGCAGCTTCGGGTACTCCGGGCGCGGGGGACGGCGGATCGCGGCCTGCGGCGGACAGGATGAGCAGGTGACGGTGTCAACTGCTGCCGATACCCTGGATGTTGCCGCCGGTC # Right flank : CCCAGGTGTCATGCCACCTTGTCTCCTAG # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:0, 6:0.25, 7:-3, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [2,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCCGCGGGGGTTGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.70,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //