Array 1 99708-100734 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQBP01000001.1 Weissella kandleri strain DSM 20593 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 99708 36 100.0 30 .................................... TTGATAGCAAGTTTGATGGTTATGAATATG 99774 36 100.0 30 .................................... TATTTGGCATCATTTCGTCAGTCTTTCCTA 99840 36 100.0 30 .................................... CCGTTTGTGCGTTCAAGTTCATCTGGTGAT 99906 36 100.0 30 .................................... GGATTAGTTCTTCAGTATTTTGAAAATACA 99972 36 100.0 30 .................................... ACCAGCGTTAGCCATTCTAACTAAATCAGA 100038 36 100.0 30 .................................... ACTAATAACCCTTTAGCTAGTTTTCAGATG 100104 36 100.0 30 .................................... AAAAAAATGGGTGATCCATACGACTTTATG 100170 36 100.0 30 .................................... CTGGGTGAGAACTATGTAGCTTATCATTCC 100236 36 100.0 30 .................................... CAGTGTGTTTTCATTCTTTTTTGTCCAAAC 100302 36 100.0 30 .................................... ATTAATTGGGCCTGCGTAATTTGGTCTTGC 100368 36 100.0 30 .................................... GTTAATGATATTGATGATAATCAAGTGTAT 100434 36 100.0 30 .................................... GGTTTTTGTTGTTGTTATTTCTGCCGTTCG 100500 36 100.0 30 .................................... CAAGATTATAACAGCGGTCGAAAAAATGAT 100566 36 100.0 31 .................................... TCAATATTTGTGTACCCTTGCCGTAATAATT 100633 36 100.0 30 .................................... TTGATTTGTATTATCCTAACGTTTGTTTTT 100699 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== =============================== ================== 16 36 99.8 30 GCTTCATATCTCTGTCAAATTAATGAGTTGTTTAGC # Left flank : TTAATAAAATTTTTGAAAAAATTCTTATCAAGAATCTTTTAAAACAAATAGATGATTTTGAATTAAATGAGCTACGTGAATTAAATAGTACACTTCAATCAAAACTTAATTTAATTTTATTTGAGTTAGATTTACCGGGGATTGTACCAGGCAATTGGGATTTGAGTAGGTTATTAAAGTACTTGGATTTACAAATAGAAGAGCCAATTTATGATGATTTATATGGTATAATAGAAAGCATAGTTGTTATTGCATCCAGGTTGGGCGACACTAGATTAATTGCGTTTTGTAATGCCGCTTTATATTTGAGTGATGATCAAATTAAGGCGTTAGATTGCGAGATGAAAATTAACAATATTGAAGCACTATTCTTTGAATCTGCTACTTTGCGAGAAAGTATAGGTGAAAGTGTACTAAATGTTGTTGAAATTGATGATGATTTTGTAAAATTCGAAGATGACTTGGTTGATTAACGGAATATAGAAGCGAACATGCGTACA # Right flank : TGAGTAAATTCATTGTTGTCGCGGATCTATACCGTAATCAAATATGAGGATGAGCTAAATTACCTCAGATTGATAATCTAATACTGGTTAAAATTTATGTTGAATGGATGCCAATTTTCTGAAAAGATGATTGGCATTTTTCTGTAGTATGAATATTATTATAATTAAGATATTTAAAATAATATATTTTAATTAGTATATACCTAAAAATATTAATCATAATTAATTGATTGTATTAAAGGGCATTGGTGTGGATCATTTCAAATGGATTATGTTGAAAATTATAAATTTTCTTGTTAATTTCAATATTAAAATTCAAGACGCATATGAATTATTGTGGTTTGGAAGTGTTAGGTGTATATTGAACATTATGTCATTTTATTAACACATATAAAGAGTGAGATTATAATGTCAAGTAGTTAAAGAATGCTGTAAAAAATAAGTATTGGAAGACTACCTTTGAATGTTTGAATATTAATGTGTACCCGTTTCTTAATCAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCATATCTCTGTCAAATTAATGAGTTGTTTAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //