Array 1 6462-4523 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKXL01000017.1 Staphylococcus felis strain F4 k127_56, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6461 36 100.0 29 .................................... TTTTGAAGATTTACCAGTAAGGACTTTAA 6396 36 100.0 29 .................................... GTACCACTAAAGCTTTCGTCTTTCATGTT 6331 36 94.4 30 ........G................A.......... AATGCTAATGTTAAAGAAGCAGACCTTACT 6265 36 100.0 29 .................................... CCTGACTCTAGACGAATGATACTTAAAGC 6200 36 94.4 29 ...................A.....A.......... GGTGCAGTCATATCATCTCGTGAATTAAA 6135 36 94.4 30 ............C................A...... TGTCTAACGGAAAAATCAATGAGGATACAA 6069 36 97.2 30 .............................T...... GATAATACTCGTCACAACATTAGCGTTACA 6003 36 100.0 30 .................................... GGTTACATTGCCTAAATATATGGTTGTGTT 5937 36 97.2 30 ..............G..................... TTCAGTATTATCGTTACCACCATTAACACG 5871 36 94.4 30 ..............T..........A.......... CGAGAGATGATATGACTCCACCTGCTCTGC 5805 36 94.4 30 ........G......................G.... TCCATAATCTCCGAATTCTGACACAATACT 5739 36 86.1 30 ........GT...............AT........T TAGTAATCCTGGGCACGTTGCAATAGTGGT 5673 36 97.2 30 ..............G..................... AATGAAAGAGAAAGCATTTTCCCTGAAAGT 5607 36 97.2 29 ..............G..................... AGCAGGTCAACAGTTAGTCGTATAATCAA 5542 36 97.2 29 ........G........................... CTTCCGAAATTGAATGTTGGTACATGGTT 5477 36 94.4 29 ............C............A.......... CATAATTATTTTTGTTGGTGTATACTAAA 5412 35 97.2 30 ......................-............. GATAGCGCATGATTAGTTGTGTAATGATAA 5347 36 100.0 29 .................................... AATATTTTCATAGCATCGCTTCTCCTTGA 5282 36 100.0 30 .................................... GACATTCAATCTCTTTTCATACGAAGAGTT 5216 36 100.0 30 .................................... ATTAATCCAATTACCTAAAGGGTTAATCGT 5150 36 100.0 30 .................................... TAACCAGTCACGTTCTTTTCGCCTTTTTGT 5084 36 100.0 30 .................................... ATAAGGCCACGAAACCATTGCACCAACTTT 5018 36 100.0 30 .................................... AGATGCAAGCGAAGCATACACCTTTATTCG 4952 36 100.0 30 .................................... CCATCATTTTTATAATAATACTTTTTACGT 4886 36 97.2 30 ............C....................... ATAATAAAGACATATTGCAGAAAGTGAAAG 4820 36 97.2 29 .........................A.......... AATGGTACTAAAAAGAAAGGGAACGTATT 4755 36 94.4 29 ............C............A.......... TTTGGTTTTTTAACAGAACTGAGCAAGAA 4690 36 97.2 30 .........................A.......... TGATCCAGGGAAAGGTAACTTATACACGGC 4624 36 94.4 30 ..............G..........A.......... ATGATGTACGTACCATGTACATTGTCCCCA 4558 36 86.1 0 ........G................T....C.T.C. | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 96.7 30 GTTTTAGAACTATGATTATTTAGAAGGAAGTAAAAC # Left flank : | # Right flank : ATTTTTTTCTGAATTTTTAGATATAATGATGATACTGGAATGACCAACTGATAATCAATAATCGAGAAATCTTAATGATACATGTCTTTTCTTTTCATTGATATAATGAAATGATATAGTCAAATATTTTTTAGAGAAGATTGTTTTATTTTATTAAGAAAGGGGAAGTTCGATGAAGTCTATTATTGCAAAACACGCTTTTAAATTGTCAGATGGGAATTTATTTGAAAAAGTGACACGTGAAAAACCAATAGTGAATGCTCATGAAGTAGGAATAGCTGTTCATGCATCAGGTGTGAATCCGATTGATACAAAGACGCGTCAAACACCACTTCAGACTGAAGCACGTGTATTAGGATATGAAGGGACAGGTGTTGTTGAAGCAGTAGGTGAAGATGTGACGCGTTTTAAAGTAGGGGATCGTGTGATGTTTGTCGGTGCACCTAAATGGGAAGGGTCGAATCAAACTTATCAAGTATTAGATGAAGCGTACATGACGC # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGATTATTTAGAAGGAAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //