Array 1 429771-431258 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018763.1 Pediococcus acidilactici strain BCC1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 429771 36 100.0 30 .................................... TCGGACTCTGCATTGTCGTAAACGGCTTGG 429837 36 100.0 30 .................................... CAAAAAAAGTTATTATTCCTGCATTGAAAG 429903 36 100.0 30 .................................... TTACCGTTTTGTTTAGACTTGAAAACTTTA 429969 36 100.0 30 .................................... CTTTTCTAGCTGATTACATTACCGGTTTTT 430035 36 100.0 30 .................................... AGCGACAGCCGTTATTTACCGGACGAACCG 430101 36 100.0 30 .................................... TGGCTGAACGTAAGGCTATAGAGAATCGAC 430167 36 100.0 30 .................................... CTTATTTGCTCGAAGAACATACTCATCAAT 430233 36 100.0 30 .................................... TTAGAGCTCGGCTTGTAGCTCCCGAAACTA 430299 36 100.0 30 .................................... GGTATTGCTGAATGTTATCAGAGGTCCCTT 430365 36 100.0 30 .................................... TATCAATGTCCCCAAATGTCCCCAAACAGA 430431 36 100.0 30 .................................... GGGAAGTACGCTCCAATGACGCTAAATTAC 430497 36 100.0 30 .................................... ATTACTGGTTACATGTTGGCGCATGTTGAC 430563 36 100.0 30 .................................... TCCCAATTGCCGCTTGCGCAGCGTGACGAG 430629 36 100.0 30 .................................... GGCCATTTGCCGAGATTAGAAATGCGGTTA 430695 36 100.0 30 .................................... TACCAGCCCACTGTCCAGCAGCACCACCTG 430761 36 100.0 30 .................................... CCCAAGGATATCGTTTGACAAATAGTTTTT 430827 36 100.0 30 .................................... AAGGATAATAACGCTGCCTTTGTCTATGAC 430893 36 100.0 30 .................................... GAACGGATTTCGGAGAATTCCTAAAATCTG 430959 36 100.0 30 .................................... AGTCTGGGTTACGTAATGTAAGCCGTGCGG 431025 36 100.0 30 .................................... ACTATAGAGGAATGGAACGAGTGCCGACCT 431091 36 100.0 30 .................................... CCGAATTAAGCAGACAATTTAGCATTGCTA 431157 36 100.0 30 .................................... AGTCTATAAAGTGATTGATCACCGCACCGA 431223 36 72.2 0 ......A.......CC.....CC.....C...TCAA | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 98.8 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAGAATTTAGTTATTCAAAAGTATTTAATTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGAATGAGCAACGTAACCAAATTCACGATCAAGTTAACCAACTATTTAATACGGTTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCATATGGTATAATTGAAGCGATTTTGAAGATCCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCGCATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATTGAATTCACAGAAATAGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAGTAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : AAAATAGATACGATTATTTATTTAATATTACAATCCTTAAAGTCCCTCCAGCAAAACAACAAGCTACTTGATCAAGCGTGACAGCTTTTAAGTAGCTTGTTGTTTTTAGTAATAAAAAACAGCCCAACCGAATCCCAATCCAGTCAGACCGTCTTAAATTTCCTACATCACCAGCGGCAATACCACCAGGCCGTTCATCAAAATGTGCGCAATCATTGAAGTTTGGATGCGTCCCGTTTTATAGTACAGCCAGCAAAATAGTAGCCCGATTGCGGCGTATAAAAAGATGTGGCTGTCGTTATGCATAAAGGCGAACGCTAAGCTGGAAATGATCGCCATGATCGTCAAACCTAAGTTCGAGCGCATCCCGAACAAAGTGCTTAAATTACCAAACAAAACTTTCCGAAAAACTAACTCTTCCATAATGGGCGCCCCAACGGTGATTGCCAACACAAAAAACGGGTTGATTTTCGCTAGGGTAACTAACGTAGCTGTGTTCG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //