Array 1 65665-67010 **** Predicted by CRISPRDetect 2.4 *** >NZ_WEHZ01000021.1 Pseudoalteromonas peptidolytica strain DSM 14001 contig00021, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 65665 32 100.0 33 ................................ TCGTTCAAGCCAGTATCTTTTGCCAAGCGCATA 65730 32 100.0 34 ................................ GGTAGTTTTAAAAGATCCGTTTACGGTAGGATTA 65796 32 100.0 34 ................................ CGCCCGTCATAACGATAATCGCCATACAAATCAA 65862 32 100.0 35 ................................ AGCACCTCTCCACGCCACAAGTCTGAACTCACTTT 65929 32 100.0 33 ................................ AACTTTATTAAGTGCATCCCCCGCAAAGTCCAG 65994 32 100.0 34 ................................ TTTGGCATCATGCCTAAGACAGCCGAGGCGGATG 66060 32 100.0 33 ................................ AGAAATGGTGAGCGGTGCGCGGTTCACTACATC 66125 32 100.0 33 ................................ ACTATCGTGACTAATGATGTAATCATCGGGAAA 66190 32 100.0 33 ................................ CCCGTGCCCAATCTGCCAATCATTGGCTGGGGT 66255 32 100.0 34 ................................ CGGTTAAAGGGCGCGTCAATGCGGCTGGCGCAAC 66321 32 100.0 34 ................................ CTATATTTAGCTTTTAGGAATAGCTAGGATTTTA 66387 32 100.0 33 ................................ CAAGTTGTTATGCACTCTTGTCAAACACGACTG 66452 32 100.0 35 ................................ TTAGTCGGGCATGTAACCAACCTCAATTATTAGAG 66519 32 100.0 34 ................................ ACGAATTGCGGTCATAGTTTTTCCTCCCAGATCA 66585 32 100.0 33 ................................ ATCAATCAGATTTTGAGTGATAATGGCACTTCG 66650 32 100.0 34 ................................ GCCTGTATTTGAGTATGTATCTATTGAGTTGAGA 66716 32 100.0 34 ................................ AAAATACCACGAACCCAGATGATGGCGATGATGT 66782 32 100.0 34 ................................ TCTATAAGCTCTATCAAGCCGCGCTCGTCTTTGC 66848 32 100.0 33 ................................ ACTTAACCTAACGGAAGGGTGGGCGGAAATAGT 66913 32 100.0 34 ................................ ACAGTGTCGCCCTCAGCTACAAGAGCGATGCCTC 66979 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 21 32 100.0 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : GCGTGTGCTTGAAGTAACACAGCAAGACCTAGATTGGCAGCAAAAGCTGCACACGTTTCAAGCGCAAAAACAAACCATTTTAGCCGAGTATGGTAATACCCCAATGGCAACAGAGCAGATTGAAGCCCTATTAATAAAGAGTTTTACTGAAAATGAACGCAAGCGAGTGGCTGTATTGACCAAATGATCCATGCTGATAGGCACAAAGCGTGTTGTAGCGTGCGTTGTTAGCTGTACTGACAAATTATTGCTGTATATAAGTCGCGATTGACAGGGGTTAAGTTTTTTACATAGTGTATGGTATAAAATATGAAGTCGATTAAATCGCTAGGGCAGCGTACTCATCAAAACCCCAGGGATCTAGCGATTTTATAAGTTATTTAAAAATATGGAAAAACTTCTTTTCTTTGTCAGTTAAACGGGCATTAAACCCCATTTAACTGATAGTTAGCGGAAAACAACAATCCGTACTAGGGTTGTTGTGCCTTGAAAGCAAGGCT # Right flank : CTTCCATGCTTCGGCTCGGGCATACTTTGAAATATTGTGTCGCGTCTCCCGCAGGCGCATAAGGTTATTTTCATTTGAGGGCTAGCATAACAAAGGAGTAACGCTTTAAACTTTTTGCCTAAGTCACATATCAAGATAAGGTGTAATACCAATTTGACTTAATACTTGCTAAATTTGAAGGAGTAAATCTGACGCTAACAGCGTTAAAAATTTCTCATTTAGAACAACTAAATAGCAAAATTTTTGCCTTGCCGACAGGACGTAGGTACCTCGGCGTGAGCAGGACGCGGAAGCGGTGTTATCGACAAGATTTTCTCGCCTCAAAATAGACCACTTAATTAAGCAAATTGGTATAACAAATGAGAATTGAACCAGATTTATGGCAACTATACTTGGATGTGTATTTTAGACCAATACGGCCACTGCGCTTTGAAGCTTCAGGGGCGATTATCAGCCTCTGGAATCCTAGCGGTGAGATACAAAGTGCAACTAAGAATGAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 6278-4589 **** Predicted by CRISPRDetect 2.4 *** >NZ_WEHZ01000027.1 Pseudoalteromonas peptidolytica strain DSM 14001 contig00027, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================= ================== 6277 32 100.0 34 ................................ ATGTTGAAAGTTCTAAAAATTTTATCGCACAGCA 6211 32 100.0 36 ................................ AGTGCATGGAGTAAACATCCTAATTACAGACCAAAA 6143 32 100.0 33 ................................ ATGCCTGTGCTGTCATACTTACCGCCATTGTTT 6078 32 100.0 34 ................................ CATGTGTATCATTGCTGCAATGACTCGTGTATAT 6012 32 100.0 34 ................................ ATAGCACCACCCTTTTGCTTGCGCTCATGCGGTT 5946 32 100.0 34 ................................ GCCGAACGCATGGGGCGCTTTGCGGAAGTGGAGT 5880 32 100.0 33 ................................ TACGATTGAATGACTCATGGTTCACCCCTCAAT 5815 32 100.0 34 ................................ CGACCTTTAAGGCGCGAGATTCGGAGCGTTCACC 5749 32 100.0 34 ................................ GTCATAATCGTCAAGCGCTGCGGTCTTAACGTGA 5683 32 100.0 34 ................................ TTTGGCATCATGCCTAAGACAGCCGAGGCGGATG 5617 32 100.0 41 ................................ GAAACACGTATCTACGTCAACGATTAGAGAAATGATTTTAG 5544 32 100.0 34 ................................ TGGCTTTGCGTGAATTTGAGTTTTTCACCGGGGA 5478 32 100.0 34 ................................ CCACAAGCATCAAAATCAATTTTATCAGTGTTAA 5412 32 100.0 34 ................................ GAAGAGCAAATGGAACTGAGTATTGGACGGCAAG 5346 32 100.0 33 ................................ TACCCAAAGTTAAAAGCATTATCAGTGGAAGAA 5281 32 100.0 34 ................................ CAGCCAGACCAATCTGCATAATGGTCAATATTAA 5215 32 100.0 35 ................................ ATGAAGGGTTTAGTCCCACTATTTACAAATGTACT 5148 32 100.0 34 ................................ TCAGACTGATTTTAGAGTTTTGAGCTCTAAAAAC 5082 32 100.0 36 ................................ TGGTCTTTTTCATCCATAACGAGCAATTGACCTCCC 5014 32 100.0 33 ................................ TCAGGAGTGATTTCTGCACCTAGCTTTAATGAA 4949 32 100.0 34 ................................ GTTTATTTGACTACGCCAATCTCAGAAAAGATGG 4883 32 100.0 33 ................................ ACCTTGGCTTGGTTATGGGTAAATATTCACCTT 4818 32 100.0 34 ................................ AGGGGGGTTTGATACGAGTAGTGATACTATTGAG 4752 32 100.0 34 ................................ AGGTTCTAAGCGAGGGCTAAGGGGACTTACTGAT 4686 32 100.0 34 ................................ CTGGACGTTTTTACCCGTGACCGTTTGCAGCATA 4620 32 93.8 0 ...........................AC... | ========== ====== ====== ====== ================================ ========================================= ================== 26 32 99.8 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : TTTGTGATTAAAAAATAAGGATTATGAACCATGATGGTATTGGTCACTTACGATGTCTCGTTTACTAGTGAAGATGGGCAAAAGCGCCTTAGGCAATTAGCAAAAGTATGTTTAGATTATGGCGTTCGCGTACAATACTCTGTATTTGAGTGTGAAATAGATGCAACACAATGGCTTATTTTTAAAAATAAGCTTTTATCTATCTATGACCCTGAAGTCGATAGCCTGCGTTTTTATAAACTAGGCAAAAATTGGCACAACAAAGTTGAGCATCATGGTGCTAAAGTTGCGTTAGATATTTTTCGTGACCCATTAATTTTGTAATCGCTAGGGCTTGGTTCTCATGAAATCCCTGTGGATCTAGCGATTTTATAAGCTCTTTAAAAATATAAGAAAAATTTTATTCTTGGTGATTAGCACTAAGGATATTGATACATTTGCTCATGGCTAGCGGAAACCTCTACACCATGATAGTGTATTTGTGCCTTTGAGAGAAGGCT # Right flank : CTCAGTGAGTAACGTGAAATTCAGTGTTTAAGCTGATTGTGTCTTTGTTTGGTAAAGGAGACGTAATGGGTTTTTGATATGTTATCGCGTTCTAATTCGAAAGAGGAGATGGCGGCAGGGCGAGACTCGAACTCACATAATATACTGTATATAACCGTTACCCATTGGAAACACTGCCGCACTCGTCTACTTTGTCATACTATTTACAAAATAGCTAACACGTTCTTAATTGCTTTTGCAAAGTTCATGACGATTATTGGCTGCTAAAAAGTTAGGCTTTATTTCAACATCTTATTGTATAGGTGAGGTTGTAATTGTACTTACTGTGATGGTGATGCGTAGAGTATTTCCCATGTTAGGGGCTGGTATGCTTGTTAACATATTGGCATTTTGCCTCTTCTATCGTGTACTTTTGCAATTTTATCTATGTACTTTATCGTGAGAGACTTGTCTTTATAATTAACTAAATGTAATGTTTGGGTTAAATGTAAAAGGATAGC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //