Array 1 3430-2668 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZM01000025.1 Streptococcus halichoeri strain S157 NODE_25_length_31805_cov_92.015879, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 3429 36 100.0 30 .................................... CTAATTTTATTGGCTTTGTAGGATACTTAG 3363 36 100.0 30 .................................... AACAGCGTAAGAAGCCCAATCTCGGCTTTG 3297 36 100.0 30 .................................... GTAAGCTTTAAGGTCGCGTCCAGAACCATC 3231 36 100.0 30 .................................... CGATAATTTCGTTATCAGCATTCATCCAAT 3165 36 100.0 30 .................................... TCTAGAAGAGGCTTTGCAACGCAAAGCTGT 3099 36 100.0 30 .................................... CAGTTTATTTAGTGATCTGATGCAATCAAC 3033 36 100.0 30 .................................... CCGCCGATTAGTTAAAGATTTGTCTAAAGT 2967 36 100.0 30 .................................... ATGGGATTTAGTCAAACAAAAAACGAGTTG 2901 36 97.2 30 ...............A.................... ATGCATTTCTTGGAGGAAGGGAGCTAAGGA 2835 36 100.0 30 .................................... TTACAGACGATTGGGAATTTAAGGTTTTTA 2769 36 100.0 30 .................................... CTTGCCCTGCTTTATCGTCAAAAATTGGTT 2703 36 97.2 0 ..............C..................... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 99.5 30 GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : TTAGCAGCAACTATAACAGAATTAATCGCCTTTGAATGTCTAGAGAACGAATTGGACTTGGAATATGATGAAATAACTATCTTGGAACTTATAAAGGCTTTAGGGGTTAAGGTGGAAACACAGAGTGATACTATTTTTGACAAGTGTTTGGAGATTTTACAAGTTTTCAAATACCTGTCTAAAAAGAAACTCTTAATTTTTGTGAATTGCGGCTCCTATCTTACCAAAGAAGAACTCTTGAAGCTGAGAGAGTATATTGAATTATCTCAGCAAACGGTCCTCTTGTTAGAGCCAAGAAGTTTGTACGATATTCCGCAATATGTTCTAGATGAAGACTATTTTTTGATAGCAGAAAACATGCCATAGTCTAGCTCCTAAAAACCTTGATTTCATAAGGCTTTTGCCGTATAATAATACTATGAAAGGGCGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : GAGTGGTAAAAAAATGTCGCATCATGTGAGGGGTAACACGAAAACCAAGAATTTTGTACGACAAATACCTAGCACTTCACAAAAAATAAGACAAAGCTATTTATACAGAATTATGTATGTCTGAGAGTTTTTATTATGATACGCTTGATATTGCACTATTAGCTTTTACAGAGCTTTACAGAGAGGGTTCTTTGATTGTTGAACGAGGAGTTTTTAGCTGGTTTATACAGTAAGTGAGCAGTTTATACGTGAAATTGTATGCTATTATAGTACTATCAAAATAGCAAGAAGAGATAACTGTTTTTTCAATTGATTATATTTAGTCGCCAACTTTAACGACGATCAAACTTGTTATTTTATGGGGACGGTCCCCCGGCGGGGACCATTTATCCGTCATGGCTCAAAACGAGGAATGCTAATGGACGCATCAAGAACCGTCGCATGTGCAGAACAGCAGACTGATAATCTGAGGTGTTAGTTCGAATCCGGTTGACGAGGTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 9710-10273 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZM01000038.1 Streptococcus halichoeri strain S157 NODE_38_length_10458_cov_80.703223, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 9710 36 100.0 30 .................................... TCGTGGACCAAGCCGAAATTTACGGCGATA 9776 36 100.0 30 .................................... AATACTGCGCTAATTACACCGGTCAATGAT 9842 36 100.0 30 .................................... AAAGCAGTCAAGCTCTCTGGCACAGCAACT 9908 36 100.0 30 .................................... TTCAACTATTTCAGTATCGTCATAGATGCT 9974 36 100.0 30 .................................... CCTTCAAAAACATTTTAATATATACGGATT 10040 36 97.2 30 ...............T.................... GCTTGCGTGAGCGATAATACCATTCGGAAA 10106 36 97.2 30 ...............T.................... TGAGACTTTGGAAGAAAAACAATTTTTAGC 10172 36 97.2 30 ...............T.................... TGGTAATGAACTTTACGGGCTTTAGTACAT 10238 36 83.3 0 ...............T.............TTG..CG | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 97.2 30 GCTTTAGAGCTATGTAGTTTTGAATGGTCCCAAAAC # Left flank : GCTATCGTTCGCGGGGAAGGGCTCACGCAGATGAAAGGATGTAAATGTTCCTTTAAAAGCTATGCCGTGCTTAAAACCAGTCAGATAGTTCAAGTTAGCCAAATTTAAAGAATAATGATGTGATAGGTAAAGGGGAAATGAATGAGGCGGACCGTAAATTAGGCGATTTTTACTGTGCTTATCAAGGTAAAAATCGCTCATGCTCCGCCAATTAACCGTAGAGCTGCCGCAGAGAGAATAAAACAAAGGTGGATTCTCAAAATCAGTCCGCCTAGAAATTAATCTGAGAAAGCTGAAAAGCAGCGCAGAATTTTTGCTTACTACAGCAACTAACCCCAATATTGTTTGAGACTTAATCGGCCGCCAAAAACTTCTTAAGCCAATTGATTTCATAAGGCTTTTGCCGTATAATAGTGCTATGAACGGACGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : AAGTGTTAGCTCCGCCTTTCCCCGTTTGATTGCTAAAACTAAAAATAAATTTGAAAACTGTACCTTTGTCAATGATGTGAGACCAAAGCAGGGATTGAAAGAAACTGAATATGCTATTCTCTAGAAGGAGCTAGCTGCTTCTAGTTTTTTTCTTGTTTCGATGGGTGAGAGCCAGTCAAGGGTCT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGAGCTATGTAGTTTTGAATGGTCCCAAAAC # Alternate repeat : GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //