Array 1 21569-20213 **** Predicted by CRISPRDetect 2.4 *** >NZ_OAJM01000023.1 Neisseria meningitidis strain Neisseria meningitidis isolate 22927, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 21568 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 21502 36 97.2 30 ............A....................... AATCAGACCGACTTTACAACGAAGGTTTGA 21436 36 100.0 30 .................................... TTGGGAGGTGGAAAACCGAATCCTGCACGA 21370 36 100.0 30 .................................... AAGCAAATCATTTTCATAGTCAGCAGCTTC 21304 36 97.2 30 ......................T............. ACGTGAGTTTGTCTATGAGTTCGACGGCGT 21238 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 21172 36 100.0 30 .................................... CCGACCGTGGGAACGACGGTATAGTGGATT 21106 36 100.0 30 .................................... TAAAAAGATACTCATTCTGCCTCCGTATTA 21040 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 20974 36 100.0 30 .................................... TAACGATTGAAAATGAGTACGCATTAAGTA 20908 36 100.0 30 .................................... TCTATCTTAATTTCTCTTTGTTCTTCTTTA 20842 36 100.0 30 .................................... CATTGCGCCCATTTTGTCTATCCGAACAAT 20776 36 100.0 30 .................................... ACCACCGCCGCTTATATAGAAAAGCTGTAA 20710 36 100.0 30 .................................... AAAAAAGTTGCGGGATAAGTTACAGTTTGA 20644 36 100.0 30 .................................... TAATTGATTTTTAAGGTTAATCAGTTTTTG 20578 36 100.0 30 .................................... CTATTTTCCTGCACCTACAACCCCCGAACG 20512 36 100.0 30 .................................... CTTTCTGTGCGATGTATTGAAAAAGCTGAG 20446 36 100.0 30 .................................... ATGCTGGATACGGCATTGATGCTGCAACTT 20380 36 100.0 30 .................................... TTGCAATCCAAGGCTTCAAAATGGCTTGGA 20314 36 100.0 30 .................................... CGCCTGACCTAATATAACCATATGGAAAAA 20248 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 99.5 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAGCGGTTGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGCTGGAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //