Array 1 4296-2514 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFKG01000056.1 Pseudoflavonifractor sp. An187 An187_contig_56, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 4295 33 100.0 34 ................................. ACCTTCGGGACGCCCACCTTATTGGCGGCCACAT 4228 33 100.0 36 ................................. TTGATGGGGGTGTATCCCAATGAGTACCGCTGTACA 4159 33 100.0 34 ................................. TCCTTGATTTCCTGCTTGCTGGCAAACACAGAGT 4092 33 100.0 35 ................................. CGTCATAGACAGAACTTCGTTGACGATGAACGCAA 4024 33 100.0 36 ................................. TCCTTGTCTGCAACAAGTGTGCTGTGCTTGTTGCCG 3955 33 100.0 33 ................................. CTGGAGGCGGTGATGTATTGGTATCGCACTAAC 3889 33 100.0 34 ................................. CCCCGCCCTTGTCGGGGCCCCCGCCTACGGCCTT 3822 33 100.0 34 ................................. TGTCTCGGGGTCCGGCCATTGACTCAACAAAACC 3755 33 100.0 33 ................................. CCCCCACCAGGCAAACACCTGGTAAACAGTGTT 3689 33 100.0 33 ................................. CCATCCGGACAGGTCAAACACGGCTCCCATCGG 3623 33 100.0 39 ................................. TTCGGACTGGTTTGTGGCCCAGGTGCTGGACAACGTCAG 3551 33 100.0 33 ................................. TCCAGACTGGACGGCAAAGAGACGGTAAGCCTC 3485 33 100.0 34 ................................. TGGTCGGCCTGGACTACTCCGAGGACGGGCTACT 3418 33 100.0 35 ................................. ACCTCGTAAATTTTAATTAACCGCGAAACTAAAAG 3350 33 100.0 35 ................................. CAAACCATCGGATTCCAGGCCGGAAGGTATGGGTC 3282 33 100.0 34 ................................. TTTAGTTTTGTCTGCAATCCAAGAGGAGTACCCT 3215 33 100.0 33 ................................. ATCAGGGTGGCAGCGCCGGACACCACTTCCGGG 3149 33 100.0 35 ................................. TCCAGTGGGTCGCCTTGTTTGGCCCCGTTGTGCTT 3081 33 100.0 35 ................................. TCCTGAGCGTATGTCTTGCCTTTTTGATATGCCTG 3013 33 100.0 35 ................................. ATCCTTCTTCTCAATGAGAGCCCAATCCGAATTGC 2945 33 100.0 33 ................................. GAAACCCAACGGGTATCTCGAAATGAATCTTGG 2879 33 100.0 33 ................................. TCGGCGATCAGCCACCAGCTGTCCCCGGCCTTG 2813 33 100.0 34 ................................. TTTCCGAGACATAAAAGCGATGTATCTGTACCTC 2746 33 100.0 34 ................................. TTTGCACAGCCCGGTGGCATGGATGACCGCCTGG 2679 33 100.0 33 ................................. GGATAGGGCACCCAACGTCAACAAAAAAGGTTA 2613 33 100.0 34 ................................. TTCCGCTGTGAGATCCTCTCGGTATGCTACACTA 2546 33 90.9 0 ..........T..............G......C | ========== ====== ====== ====== ================================= ======================================= ================== 27 33 99.7 34 GTCGCACCCCACACGGGGTGCGTGGATTGAAAT # Left flank : TGTGGTAC # Right flank : ATCGTTACCTATGGGCGGATGATTGAACTATATCTGCTCTTTCCATTCTCTGAACTCGTCTCTTCTTTTCCCCGTATAAAATATCCATCGAACCTCATCGAACAATAAAAAATATCCCCCCTCCCTGTGCTGCATGAAAGCCACCTGCTTGGAGATACTTACATACAGTATCTTCCAAACGAGGTGGCTTTTTGTGCAAGGTAAGGTGGACTTATGCGGCGTGAACACGTCGAAACTCAAGGTTCTGAAAAGCGAGGAGAGCATTGCCCTGCTCCGCCGAGCCCGACAGGGCGACCAGGCAGCCCGGGAGGAACTGATTGCCGGGAATCTGCGCCTGGTGCTGTCGGTGATTCAAAAGTTTGCAGGCCGGGGCGAACACATGGATGATCTGTTCCAGGTGGGGTGTATCGGCCTCATCAAAGCCATTGATAACTTCAATGTGGACTTGGACGTGAAGTTTTCCACCTATGGGGTGCCCATGATCATCGGAGAAATCCGCC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCACACGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCACACGAGGTGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 584-10 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFKG01000068.1 Pseudoflavonifractor sp. An187 An187_contig_68, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 583 33 100.0 34 ................................. ACCTTCGGGACGCCCACCTTATTGGCGGCCACAT 516 33 100.0 33 ................................. CCATCGAAGGTTTGATCGAGGCGGCAAATGAAA 450 33 100.0 35 ................................. AAAAATCACCAGTCCCGGGACACCTCCATGGAATC 382 33 100.0 36 ................................. CTCAGGTTGGCCCCGATATTCTCCGATGCAGAGCCA 313 33 100.0 34 ................................. CTGGTGGTCGCACCATCTGGCCCAGGTTCCCCGG 246 33 100.0 37 ................................. TCCGGGTGACTGTCTTGGGCTTTTCATTTTTCTCAGG 176 33 100.0 34 ................................. CCATCCCCCGGCTCAGAATGTTGACGTCAGAGAT 109 33 100.0 34 ................................. AAATCCTTACCAGCGTGCTGAATGGTGTGGTACA 42 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 9 33 100.0 35 GTCGCACCCCACACGGGGTGCGTGGATTGAAAT # Left flank : TGTGGTAC # Right flank : TACCTTCGGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCACACGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCACACGAGGTGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [5.0-8.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 13098-23759 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFKG01000034.1 Pseudoflavonifractor sp. An187 An187_contig_34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================================== ================== 13098 33 100.0 35 ................................. TTCCACAAACGCCTGCGGCACCTACGCCGACCAGA 13166 33 100.0 34 ................................. CGTATGCTCATTACATGTACGAGGGTGAGGTGTA 13233 33 100.0 33 ................................. CCTATGTCCCAGCCTACCCAGCAGTTCCAGACC 13299 33 100.0 35 ................................. TTTGGCGGTTACAACTGTGGGTGCAACGGAACCTA 13367 33 100.0 35 ................................. TGCAAGAAACTGGTCAAACCAATCGCTTTGCTCCT 13435 33 100.0 36 ................................. CGCCAACTCTTTGCGCTGGCACTCCTGCAACGCAGA 13504 33 100.0 34 ................................. ACTTATGCAGGCTATCTCCTACGCGGCGCATATG 13571 33 100.0 35 ................................. ATCAAAGTTTCTGGCGCAATGTCCAGTGCTTTTGA 13639 33 100.0 36 ................................. ATCGTCTGAAATGTTGACCAGGCGGCAAACGGAACT 13708 33 100.0 35 ................................. CTTGCAGTAGGCGGCTACCTTTTCAACGGTCGGCG 13776 33 100.0 34 ................................. CTGGGCCTCGTTGGCGTTGACCTGGCTTGTGCCG 13843 33 100.0 35 ................................. CCACGCCTCACCGTAGACGGTCTGGAGCGTGTCAG 13911 33 100.0 35 ................................. ATGGCCTTATCCCAGTGGGACGTGGCCAATGGGTG 13979 33 100.0 35 ................................. TCGGTAGACGCCTCGCCAATACCGACGGCAAGAAC 14047 33 100.0 37 ................................. CAGTCCTTAATGGGCTTGCCCTTGCCCTGCACCCATC 14117 33 100.0 34 ................................. CACTCGCTGTACGGGCGGAAATCAGGAGACGCAG 14184 33 100.0 36 ................................. AATGGCCTTTACGGTGAGAACCACCTTGTCCATGTC 14253 33 100.0 34 ................................. TCTGCCTGCTGCCGGTCGGCCTCGGCTTGTTTGT 14320 33 100.0 34 ................................. CGTTTAACTACGCCATGACGACAAAAGACCGAAA 14387 33 100.0 36 ................................. ATGGAATTAAATGTCCAGTATCTCCCATCGTAGAAA 14456 33 100.0 35 ................................. AAGGCAGAACTGGCAAGACTGAACGAGGCCGGGAC 14524 33 100.0 34 ................................. ACACAAAGATATAGCGGTGGCCCTATCGGTGGTG 14591 33 100.0 34 ................................. CTGTGTACAAGGAGGGTAGCATTGACACGATTAT 14658 33 100.0 34 ................................. TCAAGCCCGAGGCAATGAAAGATGAGAAGCGGCG 14725 33 100.0 35 ................................. TGGGCGGCGGCTTTGGCGGCTACGGCGCATTCGGC 14793 33 100.0 33 ................................. CTCCTAACAGAATTGAATATATCCCTGCCACCG 14859 33 100.0 34 ................................. TGCTCGTTGATGATCTTGACGATGTAGGCATGCA 14926 33 100.0 36 ................................. ACTTCTTGTCCACGGTGGTGTAGATGTTGGTGACGA 14995 33 100.0 34 ................................. AGCGAGCTGAAAAACAGCGTGGGCCGGATGAACG 15062 33 100.0 35 ................................. GTCCACCCCATGCAATGTCTGACAGGACACGGGGA 15130 33 100.0 34 ................................. CTGGGCGATCTCCCGGGCCTGGGTGCTCATGGCT 15197 33 100.0 36 ................................. CAATAAAATTTCCCAGACCATCACCGGCGGCGGCGT 15266 33 100.0 35 ................................. TGCTCGTTGATGATCTTGACGATGTAGGCATGCAG 15334 33 100.0 33 ................................. CCCGCTGGCGTAAAGGTCAATTGCTCCTCCGTA 15400 33 100.0 33 ................................. TCAAGCCCGAGGCAATGAAAGATGAGCAGCGGC 15466 33 100.0 33 ................................. TCCACGATGGCCAGCCAGAGCGATTTGGATGAT 15532 33 100.0 36 ................................. CGCGGCTGTCAGTGACCGAAAAATTAAAGTCCCCAG 15601 33 100.0 33 ................................. CTTTCCCTATGGCCAGGTTGCCACGGTGGAGCT 15667 33 100.0 36 ................................. ACCCGGGTCATCACGGTGGACTTCTCTGGCGAGTGG 15736 33 100.0 35 ................................. CACCGCCACACATTGACAGCCTGGGTGATGTCAGG 15804 33 100.0 36 ................................. GCCACTGTCCACCTGTACAACTCGCACCCCAGAAAA 15873 33 100.0 36 ................................. AAGGCAGCGGCCAAGCGGCTGGAGGCTGTCCAGGAG 15942 33 100.0 35 ................................. ACGAAAGACGATGTGGTGTGTGCCCTGGAGATGTT 16010 33 100.0 34 ................................. CAGGTGGGCTCTATAGGGATATACATAATCGATC 16077 33 100.0 34 ................................. TCAAAATGCGCCGGGTGTGGGTAACCTGGTCGTA 16144 33 100.0 34 ................................. TCCATCCAGCGGGCCAAGGCCTACATCTCCGGGG 16211 33 100.0 34 ................................. TCCGTAGAGCTCCATCAATTCTGCCGATGGGGTA 16278 33 100.0 34 ................................. AACGAGGTCATGATCCTGGAGGGGCGGAAAAACG 16345 33 100.0 34 ................................. TTTGCTCAGCCCGGTGGTATGGATGACCGCCTGG 16412 33 100.0 35 ................................. TCAAGCCCGAGGCAATGAAAGATGAGCAGCGGCGT 16480 33 100.0 35 ................................. TGTTGTACACCCGGACCTGCACCGTGTTGCGCCCC 16548 33 100.0 33 ................................. TCTGGGGCACTGGTTGTTATCTTATCTCATGTT 16614 33 100.0 35 ................................. TATGTGGAGGGCTACGCCACCACCTTTGACCAGCC 16682 33 100.0 35 ................................. TCCCCAGCAGTCACCACTATGGGCGACTGTAAGCC 16750 33 100.0 33 ................................. GCTGGAAATCTTGCGGTAATTTGGCGAGGGCAT 16816 33 100.0 35 ................................. ATCTGCCTGCTGCGCTTCCAGCCGCTCGTAAAATG 16884 33 100.0 33 ................................. CCCCTGTGGGGGACTATAGGGGGTATTAGTATC 16950 33 100.0 35 ................................. CTCCCTTCCCATGGTATGATTTTCACAAGGTAAGA 17018 33 100.0 35 ................................. CTTGATGGACATAGACCACAATAAGCTTTCCGCCA 17086 33 100.0 33 ................................. ATCACTGGCTTTGATCATGGACAGAGTGTTATA 17152 33 100.0 34 ................................. ACTCCTCCTCATATTCGGCCAGGATCTCCCGGTC 17219 33 100.0 33 ................................. AGTGACTTGGGTAGACATCTCGCTGCCTGTCTT 17285 33 100.0 34 ................................. CGCTGAGGCCTGGAGATTGTCTGCGGTCTCCTTG 17352 33 100.0 34 ................................. CTGCTGGGTCAGTCGGAAGGTGTAGGGGCTGCCG 17419 33 100.0 34 ................................. TCGGTGTTTACTACCATAACCTTGGCTGTGGTGG 17486 33 100.0 35 ................................. TCCACACTACTGGCCACGTTGAGCCAGTGGATGCG 17554 33 100.0 35 ................................. ACTTCGAGTCCATGGCCAGCCAAAGCGACCTGGAC 17622 33 100.0 35 ................................. GACTGACCCAGCAGGAACGGGAGGCCTTACAGCTG 17690 33 100.0 37 ................................. CTTTTTTCTACCACCAGGGCCTTACCCTGGAGAGCCG 17760 33 100.0 35 ................................. TTGGAGTAGCCGGGAAGATATCCCTGAGAGGTGTA 17828 33 100.0 33 ................................. GGTGCAAGGAAGCTATCCTTAAAGCACTGTCTT 17894 33 100.0 36 ................................. TCGGTGTTTACTACCATAACCTTGGCTGTGGTGGTC 17963 33 100.0 35 ................................. CTTGGATTGCATACATGTACAGGTATAAAATGGCT 18031 33 100.0 34 ................................. AACCAGATAACACCAACCGCCCTTGTACGATTTA 18098 33 100.0 34 ................................. AAGTTGTTGCTCTTTCGAGCTTGTCCACATTGTA 18165 33 100.0 35 ................................. GTAACTCTCGTAGCTTTCGCCTATACTCTGAGCCT 18233 33 100.0 34 ................................. TCGAAAACGTGTTGACAAGTGACCCCCGGCTGTG 18300 33 100.0 34 ................................. CCGTAGCGGATGGTGACGCCGGTATCACGTCCCC 18367 33 100.0 34 ................................. AGCGAGGTCTATGAGGAGGCTGCTGGATGACTAA 18434 33 100.0 34 ................................. CTTACGTCCCATTTTTAGCACGCTCCTCATACAA 18501 33 100.0 34 ................................. TGCAAGCTGGATTTACTGAGAGCAATCTGCAAAA 18568 33 100.0 34 ................................. TATCCCCTTGACATTGCGCCAATATTGGCGTATA 18635 33 100.0 35 ................................. AAGGACACTGCTAGGATGCGGGTTCGGATCTTTTC 18703 33 100.0 34 ................................. CATTGTGGTCATACTGCATGATCACGTCCGACAT 18770 33 100.0 36 ................................. CTTCCCATATGGCCAGATCGCCACAGTGGAGTTGGA 18839 33 100.0 35 ................................. CGGCTGGACCTCCACAACCGAGAGCGAGGGGCGCA 18907 33 100.0 35 ................................. TTTGGGGAGAGCAACGCCGCCCTGCGTCCAGTGAT 18975 33 100.0 33 ................................. TGACTGTATCGGTGCCAGGTATCTGCTCTATGA 19041 33 100.0 36 ................................. CTTTCCGCCAGATCCCACGGCCCACTCCGGGTCTGG 19110 33 100.0 34 ................................. CGCAATATGTCCCTGACTGGGTTGGGACGGAAGA 19177 33 100.0 33 ................................. TGTTTTAGCTGCTGCATCAGCTGTTGGCACCTA 19243 33 100.0 34 ................................. CCCGGTCAGCACATAATCCAGCGATACCCCAGCA 19310 33 100.0 36 ................................. TTTCTTGCTCTGACAATCCATCACACCATCCCCCGC 19379 33 100.0 34 ................................. CACATTTCCACCAAGTTTCCCACCACCCTCTAAT 19446 33 100.0 35 ................................. TTAATCTCCTTGTTGGTGCCAGAGAGGGCCTTGTT 19514 33 100.0 36 ................................. CCGTGCTTTGTTTTTATGACCACGGTATACCATTGG 19583 33 100.0 34 ................................. ACGTCAATAGCCCTGTCCAGGTTATACAGCTTTC 19650 33 100.0 33 ................................. TTCTATCGACTTTTCTTTAGGGGAACCCACCGA 19716 33 100.0 33 ................................. ACCAACCGCGGGGGATAGTGCGTCATCATCGTT 19782 33 100.0 34 ................................. CCCGTCCTGGCGGCGGGGGAGACCACCATCACCT 19849 33 100.0 34 ................................. ATCAGGACCATGTTTCCGGCGTACTCCGCCCAGG 19916 33 100.0 35 ................................. CAGTCGGCTCCACAGTTGTCCACGGCAAATGTGGC 19984 33 100.0 37 ................................. CTTATGAGCAGGTCATTCTTGATACTCAAGACATCAC 20054 33 100.0 35 ................................. CACGTCTTGAGGGCTATAAAATTGCACCTCGTGGG 20122 33 100.0 36 ................................. TTTGTGTCCTGCCACGGGTTGGGTCGGTAGTCCAGC 20191 33 100.0 36 ................................. ACATTGAGGTGATCGGCCAGGTGCCGGATAGGTCAG 20260 33 100.0 56 ................................. TCCGGGGAGTGGGAGGAGCCGCCCACTCCTGAGCAGCGTCGCACCCCACACGGGGT 20349 33 100.0 34 ................................. CCGTCCGCTCCAGCTCCACCGTGGCAACCTGGCC 20416 33 100.0 36 ................................. TCTCCAGATACAGCTCCATGTACTCCGAGTTTTCCG 20485 33 100.0 35 ................................. CAGGCATTAACCATAATCTCGTGCATGTTATACAT 20553 33 100.0 34 ................................. ACGCACGACCTTGCGTACAGTTTTGCCGGGTCCG 20620 33 100.0 33 ................................. ATGGAGGAGCAATTATCGCAGCTTCAAGCCGAA 20686 33 100.0 34 ................................. TCGACATTGGCGCAGATGGGGAGAGCCTGAGTAT 20753 33 100.0 34 ................................. CAGAAGGCAAGGCTGGAGGCCATCTTCGGCTTTG 20820 33 100.0 36 ................................. TGTATCAGATGCCGTGATTCCGTGCACCTGAATGTT 20889 33 100.0 33 ................................. TGGCAAACAGCTCCACGTCATTTCTGGTGGGGG 20955 33 100.0 33 ................................. ATACTTGTAGTCAGTAGATGTAACATCATTCAT 21021 33 100.0 35 ................................. TTAGCATCATCCATATGGGCATTTTACCAGACCTT 21089 33 100.0 36 ................................. AACCTGGTACGTGATTGTGTCAACTGAGGAATGCAG 21158 33 100.0 38 ................................. TCTGACACTCTTTAGGCCCGTTGTCTTGCCATCCGCTA 21229 33 100.0 34 ................................. TGCTTGTCTGAGTCCCATACGTCTGACGTTTCCA 21296 33 100.0 35 ................................. CTGTCTTAGCATCCTCAGCTCTTGACAGTCTAGGG 21364 33 100.0 34 ................................. TTGCTCAGGGTCACCGCCCTGAGTGAAGCGGTTG 21431 33 100.0 36 ................................. TTTCTGTGCTTTTTAGGAATTGGGCAAACGACATAG 21500 33 100.0 35 ................................. TATGCGTTTTGATTGTTCCTGGTCTAAAGGGCCGC 21568 33 100.0 36 ................................. GTGTATTATCCTACTGGTGATAGACCGAAACATGTG 21637 33 100.0 36 ................................. GATTCTGGTGCACCTCTAAACAAAACACTGTAAAAG 21706 33 100.0 35 ................................. GGTGACATTGTAGTGCTCCAGGAACAGAAAGTAGT 21774 33 100.0 35 ................................. ATCGAGTAGTGTTTTAATCTTGTTGTTATTATCAT 21842 33 100.0 33 ................................. TGCAAGGGCTCCGGTAATGTACACAGGAGTGCC 21908 33 100.0 35 ................................. AACAACTGCATATGTATAAAAGGAACGCAACAACA 21976 33 100.0 33 ................................. CACCGTCTCGCCAAACTCAAGGTAGCCCTTCTT 22042 33 100.0 35 ................................. GGTGAAAGCCGATAATACTACTTAAAGGGGTGCCA 22110 33 100.0 35 ................................. CTTTGAGGACATTGTGGAGATTTTTGGCAACAATG 22178 33 100.0 35 ................................. ATCAAGTACGGGCAGGTTATCGAGAAGGACGCCAA 22246 33 100.0 34 ................................. TTGATAACAAAGGAGCACATGCATCAAGCCACTG 22313 33 100.0 35 ................................. ACCAGAGAGGTGCAGTAAGCACCACATATGCCCCG 22381 33 100.0 33 ................................. CGCAAGCAACGGATTTGATGGAGCAATCCACGG 22447 33 100.0 35 ................................. TCCAGGATTTGTCCAATGGTGAAAGCCTTTCGGAT 22515 33 100.0 34 ................................. TACGATGTGTCCAACTTGGACACATTGGCGGACA 22582 33 100.0 33 ................................. CCCCGCTGCTCAACAAGCATCTGCGCCGCCGGG 22648 33 100.0 34 ................................. TGTACGAGCTGGACAGCCCGGACGAATGGGACAA 22715 33 100.0 34 ................................. TCTCTCCTTTTCTCATGTATAGCCAGGGTCAATA 22782 33 100.0 34 ................................. ATAATCAACGATGTCGGTCACGGCCTCAATTGGA 22849 33 100.0 35 ................................. ACCGGCCTGGACAGCCAGACCCAGACTCTGATCGT 22917 33 100.0 35 ................................. CAACAACGGGTATGAGGGCGACCTGGAAGTTGCGT 22985 33 100.0 35 ................................. CTCACAGACTGGACGAAGATCTTTGGCCCTGGCCT 23053 33 100.0 34 ................................. TCCAAGGCTCCTGTGGTGGAGAGTGATGGCTCTG 23120 33 100.0 34 ................................. CAGCCTGGGCGGTTTTGCCTGCGGCATCGGAGAA 23187 33 100.0 35 ................................. ACTGCAACCAGGTGAAGGGAGCGGACAATATGGAG 23255 33 100.0 35 ................................. TGTACGCCTACCTGTATCAGCTCAGATACTGCGTC 23323 33 100.0 35 ................................. TACATCAAGCGTGGCGAGGAGAACGTCATGGTGGC 23391 33 100.0 33 ................................. TCCATGATGTCCTTTGCCCAGGATTTTTGCTTC 23457 33 100.0 34 ................................. CAAGGCGTGCGGTGAGGTGGAAGGTCATCGACAA 23524 33 100.0 36 ................................. TGGGACCACCGGGACCTCAAGGAGCCTACCAGCCAG 23593 33 100.0 34 ................................. CAATTGGCTCCGGCTCTGGCGGCACAGACAAGTC 23660 33 100.0 34 ................................. AAATCCTTACCAGCGTGCTGAATGGTGTGGTACA 23727 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ======================================================== ================== 158 33 100.0 35 GTCGCACCCCACACGGGGTGCGTGGATTGAAAT # Left flank : GTACCCACCGTTTCTCTGGAGGTAGAAACATGCTGGTTCTGATTACGTATGACGTGAATACCCAGGATGCCGCTGGGCGCAAGCGGCTGCGGCAAATCGCCAAACAATGTGTCAACTACGGACAACGTGTTCAATGTTCTGTGTTCGAGTGCCTGCTGGACGCTGCGCAATGTCGCATGCTTCAGGCCAAGCTGTGCAGCATTATGGATGCCGAGAAAGACAGCCTGCGTTTTTACTACCTGGGCAATAAATATGAGAGTAAAATCGAACACTTCGGCGCCAAACAAACCTATGAACCCGAGGGTGCGCTTATCTTATAGGTTTGCCAGGTGCGAAGGGGAAGCTCTCATAACATCCCTGGGAGGTTCGCACACACATTTTTCCAGTTTATGTGAGGAGTAGAGATTTTCTCACCTCCGCAATTGTAGCACTTAGAATTTATGCTGTGCAATCTATGCAAGGAACACAACGATTCACCCCGCACCTTGTATAGATTTGCT # Right flank : ACCTTCGGG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCACACGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTCACACGAGGTGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.30,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //