Array 1 29806-29581 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGKP010000019.1 Paenibacillus sediminis strain DSM 23491 Ga0454126_19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 29805 29 100.0 38 ............................. ACGACTTCTTTGATCAGTGCGATCGCTGGTGGGAGTCG 29738 29 100.0 36 ............................. GTGGAATCAAGTATTCGTTCCAGCTGCCGACTAGGG 29673 29 100.0 35 ............................. AGAATCGAAATTAAATTGTGATTCATCGAATATGA 29609 29 89.7 0 .........................T.GT | ========== ====== ====== ====== ============================= ====================================== ================== 4 29 97.4 37 GTTTTATCTGAACGTAGTGGGATATAAAG # Left flank : CGTCTTTGTTTTGGCATAGTAGATCCGCTCCTAATTGTATTGATTTCATTCTACTAGCCCCTATTTTTTATGTCCAACTAAGTGTAGACGATCCACCTTATATTCAGGACTTAGATGAGGTCAATAT # Right flank : AGCTAATTGTAGCTACTTCAATACCGAACAACTCATGGCCATATTGTTCTATATTACGTAAAGGATATAAATGACTTGTTATTATCCGAAAAACGGATACCTCCCCTCAGAAAGTATCCGTTTTCCATATTAATTTCTAAACAAATAAAGCCCAAATCCAAGTGTATCTCGTCCCCACGTCAGGTATATTTTGCGCCAATTACGGATCTTGTTCAGCATCCAATCACGATCAGGGTGATCAGGATGGTTATGGCATTCATTCTCAATAGACATGGAGTAGAGCCATTCATATTCATCCCAATCATCTTCACTGGCAATGGTCGACCATAGAGCGGTAAGACCTAATGCTTCTGCGGCTTCAATCGTTCCTAAGTGACTTTTCATCTCGGATTCTTCAGCGCCAAGTGCAGCTAAATAATCTGGGCTCGGCTTCTTCCTCCAGTATCCTTCTCCAATAAGAATATAACCGCCTTTCTTGACAGCTTTACGCAAAGCTGTAA # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 1608-3413 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGKP010000025.1 Paenibacillus sediminis strain DSM 23491 Ga0454126_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 1608 29 100.0 36 ............................. GAATATCGCCGACTGCATACGACCTGTCATTCTTGC 1673 29 100.0 38 ............................. TTGCATGCCGCCAAGGTAATCAATAGACACATAACAAA 1740 29 100.0 35 ............................. CGGACAATGTATGTTGACGGCAAATCTTATGAGAA 1804 29 100.0 36 ............................. CTGGGTAAGGGTTTCTACTTCGACGGTAGCCTTTCC 1869 29 100.0 36 ............................. TAACTACGGCCTGGCGCTGGATTTCTGCATCGTAGC 1934 29 100.0 36 ............................. TGCTTATTTAAAAGAAAAAATGTCCGATGTTTGGGG 1999 29 100.0 36 ............................. ATGGTACAAGGAAGTAGCCTTTAGAGTTGACCAGGA 2064 29 100.0 38 ............................. TGGGCTACGTGGATTTTGTAGGCTAGTTCGTTTAGCAG 2131 29 100.0 37 ............................. TCCATAAATAGTGGTCCTGGGGCTTCCAGGGGCAGGC 2197 29 100.0 37 ............................. AAGCCAGAGGACGTCGATGATTGGTTCGTCGCGCAAG 2263 29 100.0 35 ............................. AATGGCGCAGATCAATAAGAATGGCAAGAAAGAAA 2327 29 100.0 36 ............................. CTTCGATAAGTGCTTGAAATTCTTCTTCGCTCACTA 2392 29 100.0 35 ............................. AAACGCACACCGAACATTGCTCGGGAGTTTGAAAA 2456 29 100.0 50 ............................. TCCGGTATCTCTGACACATCCGTAAAGTGCGAGTACGGAAGCCGCCGACG 2535 29 100.0 37 ............................. TCGTGTAAATCGGTACAGAACATTCGTTCAAGACGTC 2601 29 100.0 35 ............................. TATTTATGGCCTCTTTGCCGACATTCTTGAGCAGA 2665 29 100.0 36 ............................. TAGATGCCGGTAACTTTGAGACTAAGTTTTACAACG 2730 29 100.0 35 ............................. ACGACTACCGTTCCTTCTTCATTCCCAAAATCAAT 2794 29 100.0 36 ............................. TTCAGAGCCGATATATATCGTTTCTTTGCGTCCCAC 2859 29 100.0 36 ............................. ACCAATTCCGCGCCGGTGGCAATACGTGCCGTATTG 2924 29 100.0 38 ............................. GTATCCACAAGTTACCAACACCGGAAAATATTTTTAAA 2991 29 96.6 38 ...........................T. AAGAAGGAATGCCGCGACCACAAACAGAATGACATAAT 3058 29 100.0 35 ............................. AACAATATTCGATCATGGCAACAAAAGTGGGTATC 3122 29 100.0 38 ............................. TTGTTTCCTGTTGCTTCCGCTTGTTTAAGCGTATTTTG 3189 29 100.0 35 ............................. TCACTTCCGCTATCGCTTCGACGACTTCCTCCATT 3253 29 100.0 37 ............................. CGGTAAGAAAAACAAGCACCGGGAATTCACGTAGCAC 3319 29 100.0 37 ............................. GGTAGTAATCATACGCGGCAAACTCACCGAGCTTTTC 3385 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================================== ================== 28 29 99.9 37 GTTTTATCTGAACGTAGTGGGATATAAAG # Left flank : TATCGGAGACGAGAAATATAAACCTTTTAAAGCGTGGTGGTAGACTTGTTTGTAATCATAACCTATGATATAGGTGAGAAGCGGGTTAGCAAAGTATGTAAAAAGCTACGTGAGTATTTGGACTGGACACAGAACTCTGTGTTTGAAGGTGAAATTACTAAGGGCAAATTAACACGATGTCTGGCTGAATTAAAGAGTATTATGTCTGATGAAGACTCTATTTATTTGTACAAGGTAGAAAATCCAAAAGCTATTGTTAAAGAAGTAATTGGCGAGGATCGTTCCTTCGACAGGCTGTTTTTATAGACTATTTGAATTTGCATTGTGCGAAAAAAATGTCGAAAATCCCGCAAGCCTTGTGTGGAAAAGGATTTCGGGGATTTTGTAACTACTACGAATTTCAGCATTGCCGCTTCAATGCAAAATGACCTAAATTCCAATCTGAAAAAGTTGTGATTTCCCTTGTTACATCAAGGTTTTTTTGTTACCCTGTTTTTAGG # Right flank : GAACCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 208798-209287 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGKP010000005.1 Paenibacillus sediminis strain DSM 23491 Ga0454126_05, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 208798 29 96.6 36 A............................ GTAAAATTGAAAACTTGTAATTGACTCATATCATTT 208863 29 100.0 37 ............................. TTCTTAAGCCCCTTTAAGTTAATGACCCGATAGCCAA 208929 29 100.0 38 ............................. CTTATAGGAACTATTTGCGCAGGTGACGGATTGCTTGC 208996 29 100.0 35 ............................. AACAAAAAGAACCGCGAACGGTCCTTGAGTTAGAA 209060 29 100.0 37 ............................. TGTTCAAAACGATCAAGATTCATGCTGACATCTCCTT 209126 29 100.0 38 ............................. AAGATATGCACATACCCCCGCTTCCCTATCGTGCTAAA 209193 29 100.0 37 ............................. TATGATTACTCATGGTATATGGAAGATGGCAGCGTGC 209259 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ====================================== ================== 8 29 99.2 37 GTTTTATATGAACGTAGTGGGATATAAAG # Left flank : CTACTATAGACATTACTGTTAATGCACTATTAGATGCTGCTACTCCAGAAGATATTAAAGATACATGTAGCAATTGTGCTGCAGGAGTTGAAGCATATCGTATTTACTGGCCAGTTCTCTTTAAGATCGAACTAGCAACTCGGCTAAACGTCAAATACTTTACAACAGATGGACAACCTTTAACGATCTTCCCTGCAATTACTGATCAAGAAATGACAGTAGGTAAACTGTATGACTTTGTCCCTCCGGCTGACGCTAATTATGATTATGTTGGTTTTAAAAAATCTACGACAGGGAGTCCCCCCAGTGGAAGTATCATTTCGGGAGATGAAAAAATTGTCGAAAATCTGAATGCCTTGTGCGGGAAAGGATTTCAGCATTTTGTTAATTACTGCTTATTTCAGCATTGCCGCCTCAATGCAAAATGGGTTCAAAATCAGAACAAAAAAAGTGACGATTTCCTTGTTGTATCAATAATTTTTTGATAACCTAATTTTAGG # Right flank : ATTATGATTTTTATTATCTTGGACTGAAAATCTGAACATTGTGGGACTAATTAGAAAGATGACACAATCAATGTCATCTTTTTTAATAGATGCGGACAGAACATTCGTTCCCTGACAAACTATTGTCCAATACGTTTGTTTATAATAAGAAAAAACAACCATTTCAATATATTGTAAATTGTCATATGATGTGATATTTTGGAATTAATAGATTCTAATAATAAAAATCATAATGGAGGTGAATGAATGAGATTATCTGTATCTTACAGAGTAAACAGACTCCCATTGGGCTACAGAATGGTCGTATTGAGCTTAATAAAGGAAGCTTTGCGCCGCTCTAACGAACAATATTATAAGCAACTTTATGAGGTTAACCGCCACTCAATGAAACCATTCAGCACAGCTACCTATCTACGAGACTTTACATACCTCGAAGACGAAATTCATTTAAAAGAACTAACCATTACCATCGGATCGCATGATATGGAGTTTATGCTTAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //