Array 1 77421-78116 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB899933.1 Elioraea tepidiphila DSM 17972 F563DRAFT_scaffold00024.24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 77421 36 94.6 35 ..-.................................C AGGCTTCGGCGGCCTCGGAAGCATCGCCTTCACAG C [77427] 77493 37 100.0 35 ..................................... CGGGTCGCGGCCAGAAGAGCCATCGTCCCCAGCCA 77565 37 97.3 35 .............................A....... GCCAGCGGCGGGCGCGCTCCTCCCGTCGTCACGGC 77637 37 100.0 39 ..................................... AGCGTGGGCAGTCGCGGGACGTGAACTGACGCTGTTCGT 77713 37 100.0 38 ..................................... TTCTTCGCGGACCATGACGAGGAGCGGGGGGCGGTATG 77788 37 100.0 36 ..................................... TCCCCCCTTCTTCATCCTCACTTCCCAGCCGGCAGA 77861 37 100.0 37 ..................................... GCCACGCATCCGCGAAGGCGGTGGCGGACTTCAACTC 77935 37 100.0 35 ..................................... GCCTCGGCCGCGCTCTCCGCCCCCCACACCCCCTC 78007 37 100.0 36 ..................................... CGCCGCGCGGAGGCGCTGAGCCATGGCCCTCACGCG 78080 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 10 37 99.2 36 GCTTCAATGAGGCCCCGGCACGAATGCCGGGGAAGAG # Left flank : ATTTCGAGCACGGGCATTGCGCCGATCCGTTGCACCGCGGGCGCTGAGGGCGTCAGCGTCGTCCAGGAAGCGGCGACGGTTCGAATCCGGGAGCACTCCCTCCGCCAGTCCCCCCGTATCCGACCGTTCTCCGCGGCCGTGACCGCCGCCGAAAGGCGCAGGTTTCCCGGGACTTCGGCGCCCCGGCCTTGATACTGCGCTGGCGGAACGAGGGCCGCTTTCGCTCTCCGGAGGGCCGGGTCTCTCCCGACCTTGATACTAGGCCGATTTAGTCGACAAGGTTAACCCACTGATCTGACGACGTATTGCGTTGGCCTGCCGGTACGGAAGTTGGCACTCCGATCGCCCTTCCGATCGCACTTGCACGAAACTCGCCAGGGTTAACCCCCAAGGCGCCAAGGTCACACTTGTGAACCAGGGCACGGCACGGCCAGCCTCCTTGCGGCGCAAATCGCGGGCCTGCTCAAAGCCGTCGAGCCGGTACACCTCTCCGGAGTTCA # Right flank : GCACGCCTCCAACATTGCCTGTTCTACCAGGCAGTTGCAGGCCAGGTTGCGAGGACTCCCGAGCGGGGACTGGCCATATCGCCGCGTTGGCGCGCATCGCCGCCTGCGGAGGGAGCTTAACGCCTTGATTCACCCTGTCAAAGAGCCCCTGCGAGCGCTGCCGCGCGAATCGCCGCCACCTCAGCGCTCGCAGCACCTCGGCGAGCATACGGTCGATCGCCCGGCCCGGTCACACGATGATCGGTTGCCGAGCCACCGGTGCGAACGGCTTGCCGAGGCTGGAGACACGCGGCTTCACGTCATCGGCTGGTCCGAGATCGAGGACGACAACGTGATCCTCGTCGTGCTTGATGACGCCAGTGATGGCTGCCTTCAGCTCCGCCAGCCCACGGCGCGACAGCCGCGCCTGAAAGACCGACAGCTGAAGCCACTCGCCCCGCCCATTCATGACTTTGAAGAGCCGCCGCCAACGCTTCGGATCGCGCACGTCATAGGCGATC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCCCGGCACGAATGCCGGGGAAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-16.70,-16.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA // Array 1 60032-52927 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB899916.1 Elioraea tepidiphila DSM 17972 F563DRAFT_scaffold00007.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 60031 29 100.0 32 ............................. CGCGCCGCGCCGCAGGGCGTCGACGCGGTCGA 59970 29 100.0 32 ............................. TGGGTCTCTCCTCTGCCTCGGGGTCATCCCCG 59909 29 96.6 32 A............................ GAGGGTCGAGTTCCTGCTCTACCTCGCCGTCG 59848 29 100.0 32 ............................. GCGGCGCTCTCCGATGCCGAGGCCTGGGCCTG 59787 29 100.0 32 ............................. GACGGCACGGTCGCCCGCCCGGTGGTGGTGGC 59726 29 100.0 32 ............................. GAAACCACGATCGGCACCGCGCCGGTGCTGGA 59665 29 100.0 32 ............................. GCGGCGCTCTCCGATGCCGAGGCCTGGGCCTG 59604 29 100.0 32 ............................. GACGGCACGGTCGCCCGCCCGGTGGTGGTGGC 59543 29 100.0 32 ............................. AGCTGTGCGGCGGACGGGGGCACGATGGGCTG 59482 29 100.0 32 ............................. GGACCGTGTGCCTAGCAGACGCGGAGTACACG 59421 29 100.0 32 ............................. GTGACGTCGGCTCCCGCGCCCTCGCACTCGCC 59360 29 100.0 32 ............................. CTGCTGCACACGACCGAGCCAGGCCGCGGCGG 59299 29 100.0 32 ............................. CTGCTGCACACGACCGAGCCAGGCCGCATGGG 59238 29 100.0 32 ............................. CTGATGCGCGAGGAGCTCGACGCGATGTCCGG 59177 29 96.6 32 C............................ GCGCTGCCCCCGCGCGCGGTGTTGGTGTTCGA 59116 29 100.0 32 ............................. GCTCGATGATCGCGTGGATGCGCTGGCCTTCG 59055 29 100.0 32 ............................. GCCCTTGCGGCGGAGCGCGGCGTCCACCTGAC 58994 29 100.0 32 ............................. CCCCAGCAGATCACGACGAGCTGCACGTGATC 58933 29 100.0 32 ............................. GCGATTGCGCGGAATGATCCACCACCGTCGCA 58872 29 100.0 32 ............................. CCCTCGGGCCGTGCGCCCTCCTTGGAGAACAG 58811 29 89.7 32 CAC.......................... CCTCCGGCTCATGGCGCGCGCGCATGAGCTGG 58750 29 100.0 32 ............................. TAGCCGCTGAGGCTAAGGTTCGTCAACGCCGG 58689 29 96.6 32 A............................ CGATGGGTTTCTGCCGCTGGGTTCCGCGTCGG 58628 29 100.0 32 ............................. ACGGCGCGGCGCTGATCGCGGCGGCCGTGCAG 58567 29 100.0 32 ............................. TCCGGCAGCACGGTGTCGTCGGTCGCCTGGTC 58506 29 100.0 32 ............................. GTGTGCGGAAGGCGCCGTCGAGCCCCTTCCAC 58445 29 100.0 32 ............................. TAGATCCGGAAGTGCGCGGCGGTGCCCGTGGC 58384 29 96.6 32 A............................ GGTCGCGCCGGACCAGGGCGATTGGTACGACA 58323 29 100.0 32 ............................. CTCGGCACCAAGCCGCAGAAGAACCCACCGGG 58262 29 96.6 32 C............................ GGCGGGAAAAATCCCTGCATGTGGCCCATTCC 58201 29 100.0 32 ............................. GCCTCCACATCGACGACCGCGTCGTCGAGCAA 58140 29 96.6 32 C............................ TCGATAGCGGCCTCAAGGGGTTCGGCATTCTC 58079 29 100.0 32 ............................. GAGGGTGTTGCTGCCTTCCTCCGCCGTGTGGA 58018 29 100.0 32 ............................. CGGTCTGAGGTTCTGATGGAGCCGCCAAGCAA 57957 29 100.0 32 ............................. TGACGAAGGCGTGCTGAATGCCGCAGCGATGG 57896 29 96.6 32 A............................ ACGTTCGGGCCTCGGGTCATTGCGATGCTCCC 57835 29 100.0 32 ............................. AGGAACTGCATGATCGCGAGGCCCGAGAGGAC 57774 29 100.0 32 ............................. GCAACACCCTCATGAGGCCCGTGCTCAAGCAG 57713 29 100.0 32 ............................. CGAGGCCGGGCTGCGTAAGGCTGCGCTGGCGC 57652 29 96.6 32 A............................ TTCGATACTCCTACCGGTTCACTCTTCTCCTG 57591 29 96.6 32 A............................ ATCATGCGGCAGGCGAGGTCCTCGGGATGGCG 57530 29 100.0 32 ............................. CGCGGGCCGTGGCGCGCGGAAGGCCCCGACAT 57469 29 100.0 32 ............................. GCATCGCGGTGCTCCTCGTACCACAGGTGGCC 57408 29 100.0 32 ............................. GCACGCAGCCGCCGGTACTGGTCGTCCGTCAG 57347 29 100.0 32 ............................. ATCGGGTCGAGTTCTTCCCACTCGCGCGCTTC 57286 29 100.0 32 ............................. CATGGTGTTGTCGTTCTCCTCGGCGGTGTGGA 57225 29 100.0 32 ............................. TACTGGTGCGCGTCCACCAGGTGGGTCGCCCA 57164 29 100.0 32 ............................. ATGCCCCGGCGCGGCGGCAGGATATCGGCGCC 57103 29 100.0 32 ............................. CCGATCGCCGAGGGCAGGTCGATCGCGCCGAG 57042 29 100.0 32 ............................. GGCGATCCGCATCCGCGCACTGCCGCAGATAA 56981 29 100.0 32 ............................. CGATCGAGCGACAACACCGAGCAGGACGTCGG 56920 29 96.6 32 C............................ GAGGCCCGCTGGCCCGGCTACTTCATCGCCAA 56859 29 96.6 32 C............................ TTCCGTGCCGATATCGAGGCGCTGACCGACCA 56798 29 100.0 32 ............................. GCGGCGAGGGCCAGCTCGGGGTGGTGCAGGAC 56737 29 100.0 32 ............................. AGGGGGATCTTCGTCTGGTCGATCATCGTCTG 56676 29 100.0 32 ............................. TCGACCGAGAGCCAGCCCAGATCGTACTGCGC 56615 29 100.0 32 ............................. ATCGACAACAGCGACCCCGCGGACGTCGCGCG 56554 29 100.0 32 ............................. CACCGCGCCTGGTACCACGGGCTCAGCACCAG 56493 29 100.0 33 ............................. CCGATCCAGCAGACTGACGTAGGCGCCACTGAC 56431 29 100.0 32 ............................. TCGTCGACGTCGTACTGCGCCAAGATGCTTCG 56370 29 100.0 32 ............................. GCAGCGCCGACCCGCTGATGCGTCGCGTTGAA 56309 29 100.0 32 ............................. TGAGCTTGCTCTGCGTGATCGCGGCAGCCTCG 56248 29 96.6 32 C............................ TCGGCAGTGCTGATCCCGGCGGGCTGGTACTG 56187 29 100.0 32 ............................. CTGCGGCGGCGGTGGAGCGGGATCGGCACCAC 56126 29 100.0 31 ............................. TAGGCCGCGGAGCAACGCGCAACGGCCCGAT 56066 29 96.6 32 C............................ ACCGGGCGCGGGTTCCAGGACTGGCGGATGGA 56005 29 96.6 32 C............................ CAGCTTGAGCCGATCCCCGGCGGCCCGGCAGA 55944 29 100.0 32 ............................. CCGAGATCGGGCAGCGGGGACAGGGCCGGATC 55883 29 100.0 32 ............................. CGAGTAGCCGAGCAGCAGCGCGCGTCGGGTCA 55822 29 100.0 32 ............................. GAACCCCCGCCTCGGAACCGGTCGCGGCACCG 55761 29 100.0 32 ............................. TGGGGAGTGGCGAACGGCGTCGAGATCGACCG 55700 29 100.0 32 ............................. GCCCCGCCCTCCAGCCGGGCGAAGATCGTCTC 55639 29 100.0 32 ............................. GCGCTGGTGCGCGCCGCCCTGGCGCGCATCCG 55578 29 96.6 32 C............................ CCGGTGACGCGCGTCCGGCGGTCGTCGATCTC 55517 29 100.0 32 ............................. GTCACGATCGGCGGCGCGCTGTCCGGCCCTGG 55456 29 96.6 32 C............................ CTGCAACCGGGCAGCGGGGACAAGGCCGGATC 55395 29 100.0 32 ............................. CTGATGGCGTACAACAAGGCGGCAGCCGAGGA 55334 29 100.0 32 ............................. CGGACCGCTGGGCCTGGGCGTCCGGCGGGGTC 55273 29 96.6 32 A............................ CGCCTGATCGTCGTCGCGCCGATGACGTGCCC 55212 29 100.0 32 ............................. ATCCAGCTCCGTCTGATCGAGGAAGAGGCTCT 55151 29 100.0 32 ............................. TCAAGCGCGGTCGATCGCTCCACTTCCAACTT 55090 29 100.0 32 ............................. GTCGAGTGCGTCATGCGGCCGGTGAGAGCCCC 55029 29 100.0 32 ............................. TTGCCGGCAATGCGCTTCACGGTCTCGATTGG 54968 29 100.0 32 ............................. GCGCGTCGGCAAGCGGTTCCACGTCGTCGATG 54907 29 100.0 32 ............................. GGCACGTCCTGCCGGCGCATGGAAGCCTTCAT 54846 29 100.0 32 ............................. AAGGGAAGCCGTGCGATCGGCTATTGGAGTCA 54785 29 96.6 32 T............................ GCCCTGCGGGCCAAGGGCCTGCCGAGCGAGAT 54724 29 100.0 32 ............................. AGTGTCCCGAGGTAGTCCCCGGACGGGCTGTA 54663 29 100.0 32 ............................. GCGTTGGGCCGAGCGGTTTCCTCCCGACTTTC 54602 29 100.0 32 ............................. GCGGCTGCACCATCCTCGGGGATACCGTGGGC 54541 29 100.0 32 ............................. GTCATGGAGTTCTGCGCGCGCGCGGTGAGGCG 54480 29 100.0 32 ............................. CGGGACTCCTCATTAGTGTCGATGTCGGCCGG 54419 29 96.6 32 C............................ GCCAGCAAAGATGTTGACCACGATCGGGGCAC 54358 29 100.0 32 ............................. GGCCTGCCGATCGAGGACGAAGCCGCCGTCGA 54297 29 100.0 32 ............................. TCAGCCGCCTGCGCGATGCGGCGGCTTCATTC 54236 29 100.0 32 ............................. AAGATGCACTAGGCCGTGTCCGTACATGGGGC 54175 29 100.0 32 ............................. GTCCCACTCGGGCCTACCGTAGGCGAGCCGAG 54114 29 100.0 32 ............................. CGGTGGTGGACTTCGGCCGACGCTCCGTTCCA 54053 29 100.0 32 ............................. CGATGCCCTATCGGGCCCCGATCGTGGTCAAC 53992 29 100.0 32 ............................. TCGAGGACGCCCTTCGCGTCTGGACGGCGGCC 53931 29 100.0 32 ............................. TCCAGCCGATGGTCGAGGGGATCGAGGAGCTA 53870 29 96.6 32 C............................ CAGGCTGAGGACCTCACGCGCGGCCTGTTGCA 53809 29 100.0 32 ............................. ATCAATGGGCGCGTCCTGGAGGTCGCCGAGGC 53748 29 100.0 32 ............................. GTTGGATTACACACTCGCGCATATATCCCTCC 53687 29 100.0 32 ............................. GGACCACGGCTGCCAGCTGCCGCCCCCGCTCG 53626 29 96.6 32 A............................ TTCAGGCCGACGATCCAGCGGACCAGCGAGCC 53565 29 100.0 32 ............................. ATGTCGCCGAGCGGCTCGTTGTCGCCACCCGA 53504 29 100.0 32 ............................. CGGCCCGGCCACTGGTACCTGCGCCACGTCGG 53443 29 100.0 32 ............................. GCGGAGACGCAGAACCAGCGCGACCGGGAGCG 53382 29 100.0 32 ............................. AGCGCCGCCGGGCCGAGCACCGGCTTGACGAT 53321 29 100.0 32 ............................. GGGCTGGTGCCGGGCACGCGCGCGCTCTGCGT 53260 29 100.0 32 ............................. GACCACTCGATGGACCACTGCTGCGGCTGCGC 53199 29 100.0 32 ............................. GCACGGGCGGTGGAAGCGTGGGAGGCGGACCA 53138 29 100.0 32 ............................. CACGACCAGATTGCCGGCCGCGTCGCGCCAGC 53077 29 100.0 32 ............................. CTCGCCGATCAGGCCGGCGTCTCGACCGATGC 53016 29 100.0 32 ............................. GCGATCAGGATCGGATCGCGCGAGAGCGTGCC 52955 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 117 29 99.3 32 GGGGCCATCCCCGCGCGGGCGGGGGCACC # Left flank : GCAAGCGCCGCCGCCTAAAGCTCGTCGAATGGTTCCGCGTCCGCTCGCTGCTGCGCGCGACGCAGGCGGTGCCGTAGGACGTGCGCAACCGGCGCCTGGTCTACGTGTTCGCGCCGCTCGAGGAGCAGGACCGGCGCGCGGGCAAGGTGGTGATCGGCGTCGTCTTTGGGTGGCGGGCGGAGGGCGGGCCCGCGCGCGGCTCCGCGATCGTCAGCGGCGGCCTGGTGCCGCGCGGCGCGTTCGAGCAGCCGAGCGAGTACCGGCCAATTTCACCGCCGGACTGGGGGCGGTAGCCGAGGGGGCTCACAACACCCCACCTAGCGCGCCGGCTGCCAGGGCCGGGTCCCCGGTCGCTGCTGCGTTTCGCGATCCCGGCTACCGGTGCGGACTCTAGTCGTCCGCACCGATGCCGCCAAGGACCTGGGAAGCCCGTGGAGAGGCCAGTGCTGGCGGTCGCCCCCCCCTTTCCTCGCACGAGCACGTCCCGAACCGGAGAGGCC # Right flank : TCTAGCCAACAACAGCTTGATCCGATTCGATTGTCAAAGATCAGGTAGTTGTCGCGGCAGACACTTCTTCGCGCCACACGAGCAGCGCACCATCAATCTCCGCAAGCCGCCGCGGCGGCAATCCCAGAACCCGGATCCCCTGACCGCCCGGTGCCTGCACATCGCGCCACGTCATGACGATCGAGCCGCCGCCAAGTGCGTCAAACCACGCCTCCATCACCTCCCACACACGATCCCGCACCCCCGCAGACAGGCGTGGGCTGGTGTAGACGCCGGGCGCGATCTCTAGCATCGCCGAGGCGAGAAAGCCCCGGAAGCGCGGGGCGACGTCGCGTGTCACGATCACCGTCATCGCCATCGCCTACTCCACCTGAAACAGCGCCTTGATGCGCTCGATGAGTGTCGGGATCACACGCTCGGTGCGGAACGCCGATGCTGCGCCACGACGCACCAGGGCATCGAGACTGAGCGGACTGCCGCGCAGATGCTCCTTTGCCGCA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGGCCATCCCCGCGCGGGCGGGGGCACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA //