Array 1 37107-35685 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXES01000005.1 Lacticaseibacillus paracasei strain B3 scaffold5.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 37106 36 100.0 30 .................................... TCTCAAGTAGTGGCACCATCTGCATAACAT 37040 36 100.0 30 .................................... CGAGTCGGCACGGATTCAACATGCGGCACA 36974 36 100.0 29 .................................... ATACAAAAAAATCATACAGCCTGCATCAC 36909 36 100.0 30 .................................... CACTTGATGCTCACGCCATCCCAAGCATTT 36843 36 100.0 30 .................................... CGGCATTGCCTCGGCGCATGGCTGGGGTGC 36777 36 100.0 30 .................................... AAAAACAAAAGTTCAAAAGCGTGGTTCAGC 36711 36 100.0 30 .................................... ATGGATGATGCATTTGATCGACAGTGGCCC 36645 36 100.0 30 .................................... TTTAGTTAGTCGGTCAATGTCTGCTACTCT 36579 36 100.0 30 .................................... GTGTTAGACTTAGATGTGGATGTTGCCCCG 36513 36 100.0 30 .................................... ATACCAAGGCGGTGGCATGGCGTATACTGA 36447 36 100.0 30 .................................... AGAACTGGACGCCGAACGCTTGGACACGCC 36381 36 100.0 30 .................................... CCCTTTCGCCGCCATCTTTGATCGCCCACG 36315 36 100.0 30 .................................... GCTATCTGGCTTGAATTCCTTAATCGATTT 36249 36 100.0 30 .................................... GAGGCTTACCCCGTCTTTACCAGTTGGTCC 36183 36 97.2 30 ..............C..................... TTGTTCATAGCAGCGTTGGCACGGGTATTG 36117 36 100.0 30 .................................... CGTGTTATTGTAATTAGTCGCCAAGTCTTG 36051 36 100.0 30 .................................... GCTGTCAAGTATCTCATGTCCTTCTAGAAA 35985 36 100.0 30 .................................... AACGTTGACCGCTCTGTCTCACGAAACTGG 35919 36 100.0 30 .................................... GAACTTTGTATCGTTTCTCTTTGCGCACGG 35853 36 100.0 30 .................................... ACGTTAAACGTACACCATGCCGCACAGTCC 35787 36 100.0 30 .................................... GACGATCTCGCACATGCTCAGTGATATGCG 35721 36 91.7 0 ..........................T..A....C. | T [35689] ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.5 30 GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Left flank : AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGCTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGGATTTAATTCAAGATCCATTCTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTCGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGACTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAATGAAACTTGTCATTCTTACAAATGTCAGTCATTATTTAAGTGCCAGAGATTTCTTTGCGGTGACTGAACAGATCGGCGATACAGAACTTCAGGTTGTTCTCATTGAGTTCTCAAAAGTGAACCGAAGGAAATACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGATAGTCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACCA # Right flank : CATAATTCCGAGAAAATGAATTGGCGGATTTTAGAGTCAATCTCATGCTAGAAATAACCAATTCCGCAACTTTAACGTCTTCGGTCTGGTTAGCGTTCGCAATATTGATGGCTCTAGCAACTCAGGTAATTGCCGGTGCGGTTTTCGTGGACCGCTAACATCTTTATTATGCCGTCAGCCATGCTTCAAAGTTAGGGATGTCTTTAACGTACCTGCTGGTGTTGACTATGACATCTGCTACTCAATTAATATTGCCGATTTGCTGACTACACAACTGCCTCTGTAGTGGGAATATAGGCAGTGACGCCTGTAACAATATGATTTAACATTCAAGTTTCTTCAAGGGAAAACATATGCGAGTGCTCATGTCCTTCAAAATGTTTGATGACTGCGAACATCATCGATTATTGTGAAACAGCAGGCATACCTGTCTAAACTTTTTTCGATCAGTGCTTAATTAACGAAGTTCTTCTGTGTCAGTCGCAACCTGAGTTGAGAGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //