Array 1 1-816 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JQRT01000212.1 Leptospira alstonii strain 56668 Contig212, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	====================================	=====================================	==================
         1	    30	  83.3	    36	------..............................	CCGAAATTTTAATTCTTCCCCCGGATTTTCGCGGTA 	
        67	    36	 100.0	    36	....................................	GAGTAAGCCCGCCATTTTCATTGACCAGGGAGATAT 	
       139	    36	 100.0	    36	....................................	GAATTAAAGCATGGCCGTAAAGAGAGAAACGAAAGA 	
       211	    36	 100.0	    36	....................................	GAAAGGCATCAATATAATCTGTCCAAAACCCAGGAT 	
       283	    36	 100.0	    34	....................................	AAATCGCAGAGGATCTTAAAGAACTAAAATGGAA   	
       353	    36	 100.0	    35	....................................	ACAGAAATTATGAATTTTCTTTTTCAAAAACTATC  	
       424	    36	 100.0	    37	....................................	TATCATAGGATTTCTCGAAGATTCTTAGGCGATTTTT	
       497	    36	 100.0	    34	....................................	CCGACTACGCCGGAGAGTGGTTTGTAGTGGATGC   	
       567	    36	 100.0	    35	....................................	AGCACGAATTTTCAAGAAAGAAAATGGCCCAATGG  	
       638	    36	 100.0	    34	....................................	GAACCAGGGCAGTCGGGTTTGATTTTGCCTACGC   	
       708	    36	 100.0	    37	....................................	TTTATTCTGATTACGATAGGTGGCGCAACGATTTAAT	
       781	    36	  83.3	     0	..........................G...AG.ACT	|                                    	
==========	======	======	======	====================================	=====================================	==================
        12	    36	  97.2	    36	CTGAACATACCTTTGATGCCGTTAGGCGTTGAGCAC	                                     	       

# Left flank :   |
# Right flank :  TTACATACAATAAAACGCAAGCGTTCCGACAAAAATGGAGCTTTTTACTTGCAAAAAGTATGATTTTCTAATAGAGAAATGCCACCGGAGTTTTCCCGCCTCCTATTTCGCGATCCTGAAACGCGATCCATAGAGAGCCATAACCTTACCCACAAATATGAGAAAAAACTAGATTTTTCAACCTTTATTTCCAAAGTTAGTAAGGGC

# Questionable array : NO	 Score: 3.12
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTGAACATACCTTTGATGCCGTTAGGCGTTGAGCAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [8,10] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.80,-4.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0.37   Confidence: MEDIUM] 

# Array family : NA
//