Array 1 519-5 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAWJ01000040.1 Psychrobacter sp. JCM 18903, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ============================================== ================== 518 27 100.0 42 ........................... AAGAGAAACGTGTAGAAATGTTTAAGATTGCATAGTCTTAAT 449 27 100.0 41 ........................... CGTACGGTAATGTGATGTCACGTTTCTTAAATGTCTTAATC 381 27 100.0 43 ........................... TTATGAACGTTAAACAAGAAGTGAAAGTACTAAAGTCTTAATC 311 27 100.0 41 ........................... TAACCCCACTGTAACGACATATAGAGGTATTAGTCTTAATC 243 27 100.0 42 ........................... TCCTATTTATTACTTGCGAATATATCGTACTTTGTCTTAATC 174 27 100.0 46 ........................... TGATGTTGGGAGCCTAGGTGAGCTGTTAAGATAGTATGTCTTAATC 101 27 100.0 43 ........................... GAATAATATACTCAATACGCGCGGTTTCAGTGAGGTCTTAATC 31 27 100.0 0 ........................... | ========== ====== ====== ====== =========================== ============================================== ================== 8 27 100.0 43 CCTTAGAAATCAGGGAGCGGTTCAGAC # Left flank : AGTCAGTACCATTCCAAAATAGCGTTTGTCTTTATAGAGAGTACCGTCAGAAAATTTATAGTCGGTGGTTCTATAGCTACCGCCTTGTTTACCGCCACCCAAAAAGCTAATTAATGTGGTCATGTGATATGTAACCTCTTAGTGGGGTATTTGGTCGTAATAATATCGCACTCGTAGTGATGACGGCTAGTAGAGCAGTTTATGAAAAAAGCCAATAGCATCGATTATATTTTAAATCAGCCATAAAAAACAGGACAAAAGTATAAACCTTTGTCCTGTCATAGACAGCCAATCATTATATTAAATCTGACATGATCTAACGTCTTGCTCGAGCACAGCTCTGCGCCTCGGGTAAGTATTTCCCATGATTACCAAGCCTCCAGAAAATTCTATTTAAGGAATTTTCTGTTCAGACCGTTGTAGCTAGTTTGACAGAATTTACGAAAATGTAAATTCTCTTGCGAAGCTAAAATTGGCATGCAATTTTTTGACGCTTCTCA # Right flank : CTCAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAGAAATCAGGGAGCGGTTCAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 516-7 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAWJ01000029.1 Psychrobacter sp. JCM 18903, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ============================================ ================== 515 27 100.0 42 ........................... GATTAAGACAAATTCTTATGTTCAATCCAACTAGGAGAAATT 446 27 100.0 42 ........................... GATTAAGACCTAATAGCTTGTCCAATAATATCTTCTTTATTA 377 27 100.0 44 ........................... GATTAAGACACCATGAAACATAATGACTATGGCGATTTAGATAG 306 27 100.0 41 ........................... GATTAAGACATGACTTATCTAACGTGTCTGCATTACCGTTT 238 27 100.0 41 ........................... GATTAAGACCTAAATCTTTTACTGAAGCCGTTAAACTTTGA 170 27 96.3 42 ..............C............ GATTAAGACTGTATCTAGAGTATTCATTGTAGAATATTCTTG 102 27 96.3 42 ..............C............ ATTAAGACATAGTATAGTAGATGAACATAGAAAGAAGTATGA 33 27 96.3 0 ..............C............ | ========== ====== ====== ====== =========================== ============================================ ================== 8 27 98.6 42 GTCTGAACCGCTCCTTGATTTCTAAGG # Left flank : CGCGCAAAGGTATGGATACCTTTATCATAGCGATGCAAAAAATCATTCACCCCACTGATGATGATCTGCGCATTTATGAGGTCGAGCCACTAGAGCATGCGTTTGTGATTGGTAAGCAAAGCGATGACATTATGCTGTTTAGCGAGATAGGCGAACTCAAGCGATAGCTTTCAATAAATAGCCTTTCAAGCCAATGGCTCATCATCAATGCGTTATACGAGCAGCATCTCGTTTCTTATCTTGCACTTATCATGCACATCTATTACTATAATACCGTGAGCTTCAACACTCACACCCTACGCAATTAGGGACGGTTTTCAGACATTATCTGGTGAAGATAACGGCAGCTATTTAACGTTTTGGACGTATAATTGGTTATTATTTATACAAATTTTGATTAAAAATTGGTTAAAAAAACACCAACTTTTTATATCGACTTTTGTTGGTTAAATTACTATCTGTAAGTATTTGATTTTATTTATAATAAAAATAATTGTACA # Right flank : GATTAAG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAACCGCTCCTTGATTTCTAAGG # Alternate repeat : GTCTGAACCGCTCCCTGATTTCTAAGG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [8.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 5148-5311 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAWJ01000029.1 Psychrobacter sp. JCM 18903, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ========================================== ================== 5148 27 100.0 41 ........................... TGACCGTCCTGATGAGCACCGGGTCATCATTGTGTCTTAAT 5216 27 100.0 42 ........................... AACACATTAAGTCGAGTATAGCTGAATACATAAGTCTTAATC 5285 27 100.0 0 ........................... | ========== ====== ====== ====== =========================== ========================================== ================== 3 27 100.0 42 CCTTAGAAATCAGGGAGCGGTTCAGAC # Left flank : CACTGGGCGGTTGATGTGCCCATTATGGAGGAGAGGAGAGTGATGCTAGTAGAATGACAAGCTTGTGACAATCTGTATTCCAAAAACAAAACACCACCTATCAAGGTGGTGTTTTGTTTTGTATGTGCTTGCATGCAATTGTTTAACATCTTGCTCGAGCATAGCTCTGCGCCTTGCGCTTCGGGTGAGTGTCTCTCATGATTACCAATCCTCCAGAAAATTCCATTTAAGGAATTCTGTTCAGACCGTTGTAGCCAGCTTGATAGAATTTACGAAAATGTAAATTCTCTTGCGAAGCTAAAATTGGCATGCAATTTTTGACGCTTCTCACCTTAGAAATCAGGGATAAGGAAGGGATCAGCAAAGTAGTACTTTGCCCTGACGTAAGAGAAAATCTGAGATTTTCTGTTCAGACCGTTGTAGCCAGCTTGATAGAATTTACGAAAATGTAAATTCTCTTGCGAAGCTAAAATTGACATGCAATTTTTTAACGCTTCTCA # Right flank : CTGTACAATTATTTTTATTATTAATAAAATCAAATACTTACAATTAGGTATTTAGACAACAAAAGTTAAGTAAAAAAGTTGGTGTTTTTTGAACCAATTTTTAACCAAGATTTGTATAAATAATAATCAATTATACGTCTAGAACGTTAAATAGTCGCCGTTATCTTCATCAGATAATGTCTGAAACGCCCTGAATAGGTCAGGGGTCAATTAATGAAAAGTGACAGTGTCATAGTAGATGATAGGTTATAGGATTGCAACAGTTACGCCACAATCCTATAGCTTAAAGCCGTAAAGAACTAATGAGTTAATTTATATTTTTTAAAGCCAATAAACGCTCGATCCAAGCCCTTTGATTGTCTTTAGCTTTGGACGGTTGTTTCATTTGCTTAGCATAATGAATTTTGGCTATTTCAATGAGCAAGTGGACGCATTTTGTTTCTGCCGAAGCAGCTTCAAGCTTATCTAACCAGTCAGGGATGGCTGTAGTAAAGTTGGTC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAGAAATCAGGGAGCGGTTCAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [68.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //