Array 1 744772-755220 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKJI01000001.1 Pedobacter puniceum strain HX-22-1 Scaffold1_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ================================= ================== 744772 46 95.7 29 A............................................T ACCAAAGCGGACAACCTGTTTTAGACTTA 744847 46 100.0 30 .............................................. AAACTGCTCATCTATAATATCTGTTGCTGA 744923 46 100.0 29 .............................................. GTTAGCATACGTTCTGCTACTGCAAGTCC 744998 46 100.0 30 .............................................. ACAGCTTTCGTTTTGTGTGCAAGTGCAAGT 745074 46 100.0 30 .............................................. TGAATCTGCGCAAAGAAAGTTAAGCTATTA 745150 46 100.0 30 .............................................. GTACTCTCTTTATGCCGTACTCTTTATTCT 745226 46 100.0 30 .............................................. GGACAACCTGTAAACGGTTTTCCTCCTTCG 745302 46 100.0 30 .............................................. GGTGGTAAAACTGGTGTTAGTGGTGAGGTT 745378 46 100.0 30 .............................................. CCGAGTTCCTCCCCTTGTTTCTTTTTTATT 745454 46 100.0 30 .............................................. TTATATTAGAAGCACTAATGTAGCCTTGCT 745530 46 100.0 29 .............................................. TCTAAAATCGCCAGCGATGCGGTCGTTTT 745605 46 100.0 30 .............................................. CTCTAAAATCGCCAGCGATGCGGTCATTCT 745681 46 100.0 30 .............................................. GGTTTTGTTTTCTGATGTTTCTTGTTGAAG 745757 46 100.0 30 .............................................. TTTCCAATTGACTTTAAGTTTCGCGGTAGC 745833 46 100.0 30 .............................................. CCAAACAGTTATAACATAGCAAAAGAATTT 745909 46 100.0 30 .............................................. AAAAGAAAGCGGATTACAGTTATCAAAGCA 745985 46 100.0 30 .............................................. TTTTAAAGCTGTAAGGGTTTGGGGTGGTTT 746061 46 100.0 30 .............................................. TTTATGTCCTGTAAGCAAACTTAACGAGGC 746137 46 100.0 30 .............................................. AACATCTAGTTTGTTGTTTAGGAATTTACC 746213 46 100.0 30 .............................................. CAGCTTGCACCTCTTCCAATACCAATCCCC 746289 46 100.0 30 .............................................. AACATCTAGTTTGTTGTTTAGGAATTTACC 746365 46 100.0 30 .............................................. TGTAGGGCTTTGGAGCGGTAATCGGCTGAA 746441 46 100.0 30 .............................................. AAATAACAAGGCATTACAACGTAGGAACTC 746517 46 100.0 30 .............................................. ACATTTTTTCCTGCAATTCGGCAATGTTTA 746593 46 100.0 29 .............................................. GGCTCTTTCTTTGGTGTTGCAAGCACCTA 746668 46 100.0 30 .............................................. TCTCGGTAAGGGCTTTTTAAAACCATCAAT 746744 46 100.0 30 .............................................. CTCTAAAATCGCCAGCGATGCGGTCATTTT 746820 46 100.0 30 .............................................. TAATAACTCTAAGTTACCTGCTTCCCTACT 746896 46 100.0 30 .............................................. TTTTAACTCGGCCTTACTTTGTGGATCTAT 746972 46 100.0 33 .............................................. AACGAGGATTAATAATACTGTTTACACCAAAAC 747051 46 100.0 30 .............................................. AAATAACAAGGCATTACAGCGTAGGAACTC 747127 46 100.0 30 .............................................. ATCCGTTTGAAACATCGGTATACTTTCCGT 747203 46 100.0 30 .............................................. TTGGGCTTTGTTTTTGTGCATTTCGTTTCC 747279 46 100.0 30 .............................................. GTTGTAAGAAATGCTTATAGGCAAATTACT 747355 46 100.0 30 .............................................. AATAGTAATCATAGAAGACACTGTTTACAA 747431 46 100.0 30 .............................................. TTGAAGACGCTCTACTTTGTCCATGTTATC 747507 46 100.0 29 .............................................. GCCCCAGCGGTAACTGTTTTAGTTTCATC 747582 46 100.0 30 .............................................. GTGTCCTATAATACAAGACTCTAAACCTGT 747658 46 100.0 30 .............................................. GCAGAGTTATTCAATCTTGTAGCATCGTTA 747734 46 100.0 30 .............................................. CTAATCTGTCTTGTACAGACCTAGAGTCTA 747810 46 100.0 30 .............................................. ATAGAACTACAGCTATATATTATACAGACA 747886 46 100.0 30 .............................................. CCACCAAGTCCTCTGGGTAGTCTTCATTAT 747962 46 100.0 30 .............................................. TACGTATAATTTATTTGGAGCTGAAACTAT 748038 46 100.0 30 .............................................. TCATAAAGCTATGGCAGTACTTTACAGACC 748114 46 100.0 30 .............................................. CAAATTTACCTTTAAGATTAAAACCCCTTG 748190 46 100.0 30 .............................................. TTATGAAGGTTTTCCTGTAATTAGACATTG 748266 46 100.0 30 .............................................. ACAAAGAATTGGCACATGGTAGCCTCCATT 748342 46 100.0 30 .............................................. TACAGTTACTACCGTACCATTTTGTACATT 748418 46 100.0 30 .............................................. CACTTGGGAAAGGCTCTACTGGTGTAAATG 748494 46 100.0 30 .............................................. CACGCAATAAAAATGGCTTTCTTTTCTGTT 748570 46 100.0 30 .............................................. TGGTAATGGTTTTCATCCTACTACCGGGCG 748646 46 100.0 30 .............................................. TGGGTGGTACTTCTGGCAGCTCTTGCCGGC 748722 46 100.0 30 .............................................. TTGTTTATTGATATTCTTTTGTTCTTGGCT 748798 46 100.0 30 .............................................. CAGCCTTTAACCTTTTTACCTCATCCACAT 748874 46 100.0 30 .............................................. AAAGTCAGGAGACCTGCCTAATCGCTCTTT 748950 46 100.0 30 .............................................. AAAGTCAGGAGACCTGCCTAATCGCTCTTT 749026 46 100.0 28 .............................................. AAATCAATCTATTTGCTGGCTCTGATTT 749100 46 100.0 30 .............................................. GCATAAAGTCGTTAAATGCTTCTTTGGATT 749176 46 100.0 30 .............................................. TATCAATCCAGAAGGAAAGACTGTTTATTC 749252 46 100.0 30 .............................................. GAACTTCGCTGATTACTACAGGGTTCGAAT 749328 46 100.0 30 .............................................. CAACATACGCTATAGAATGTTGAGTCACAG 749404 46 100.0 30 .............................................. TAACGTAATTGTTACCAATCCTCTGTTTGT 749480 46 100.0 30 .............................................. TGTTTAAGTATCCTGATGTTTCCTTTTGAT 749556 46 100.0 30 .............................................. CAATATAAGAGTTAACAACGTTAATAATAG 749632 46 100.0 30 .............................................. TTGGTTGGCAATCATCCACATAGGTATTAA 749708 46 100.0 30 .............................................. CACGCAATACCAACTCTTTTTGTTTGCTCT 749784 46 100.0 30 .............................................. ATGTTGCGTATTAGGCTCATCAAGAAGTCT 749860 46 100.0 30 .............................................. TGTAACATCTTTATGTAAAAGCTTTACATC 749936 46 100.0 30 .............................................. TTTTATTTGCCTATCTAATGCTTGTTGTGT 750012 46 100.0 30 .............................................. GGTGGCGGAATTGGTAGACGCTGGGAGTGT 750088 46 100.0 30 .............................................. TCAGGGCTTATTGGTTTAACAGAGTCAAGC 750164 46 100.0 30 .............................................. CATTATGAGGCAAGTAGAGCGAGATTTGGT 750240 46 100.0 30 .............................................. GGTATATCATCTAAAACCTTGTATAACATT 750316 46 100.0 30 .............................................. GGTATATCATCTAAAACCTTGTATAACATT 750392 46 100.0 30 .............................................. GATTATCCTTTATGTATTTGTTCAATTAGT 750468 46 100.0 30 .............................................. AAAACTTTAGCAAATAGGTTTAAAAAAGGT 750544 46 100.0 30 .............................................. TATACATGAATACAACCCTATTGAAAGGTA 750620 46 100.0 30 .............................................. TTGATTGATGAGGTAAAAGAAAAAGGTTGT 750696 46 100.0 29 .............................................. TAAATTCTTAATTGTTACTTGCTGCGTAA 750771 46 100.0 30 .............................................. ATGATTGACCTTGACCGGTAATTTCAATCC 750847 46 100.0 30 .............................................. CAGGCCCTTTAATTGCTGCAATGGAATAGT 750923 46 100.0 30 .............................................. AATGGCTTCTTCTACGGTACCATCTTTATG 750999 46 100.0 30 .............................................. ACCAGTGCATAAGCTTGATGAGAGCATTTT 751075 46 100.0 30 .............................................. ATAAAAACTCTTCTTCATTACTGGCGTTTC 751151 46 100.0 30 .............................................. TTCTAGGGAATTTATTTGAAGGTATCAAGT 751227 46 100.0 30 .............................................. CAAAATCATATAATATAACAGGCTTAGGCT 751303 46 100.0 30 .............................................. TAAAAGACATCGAAAACAAAATAGATAAAA 751379 46 100.0 30 .............................................. ATCGAAGCGATGGACAAAATCTCTAAATCT 751455 46 100.0 30 .............................................. TGTCAATCTAAAAGCAGCATCCAAATCCCT 751531 46 100.0 30 .............................................. AAATCTGCTTTTGCTACAGGAGCACAAGCA 751607 46 100.0 30 .............................................. TATTTTCTGGGTTAACAAATAAAGAGTATA 751683 46 100.0 30 .............................................. TAAAGCCCTGGCATCTTCATTGGGTACATC 751759 46 100.0 30 .............................................. TAATTTTATATTGATTAATACATTTTAATT 751835 46 100.0 29 .............................................. AGCTTAATGAAAATGTAACAAAATCCTCG 751910 46 100.0 30 .............................................. CAATGGTTCTAAAACCTTTTTGCGGTAAGG 751986 46 100.0 30 .............................................. CGGTTTTCTTTTCAGAGTTAGACTGAATTT 752062 46 100.0 30 .............................................. TACACCCATACACAACCAAAATAAATGATA 752138 46 100.0 30 .............................................. TATCCGTTAAATCTACCCTACCACCTTTAA 752214 46 100.0 30 .............................................. GGTTACCGCTATTATGCGCCCACGCAATCC 752290 46 100.0 29 .............................................. TTAATCTATGGTTTTGAAACATTCTACAT 752365 46 100.0 30 .............................................. TTCTTTCTTTAGCTCAGCTATTCTTTGTTT 752441 46 100.0 30 .............................................. TATCGTTCCTTATTTTCGATTTGTCCGAAT 752517 46 100.0 30 .............................................. TGTAATTTGATTTTCTTCTATCTCAACTTT 752593 46 100.0 30 .............................................. GTAACCTTCTAAGCCGGCAAGATTGTTTCC 752669 46 100.0 30 .............................................. GCAACATTAGCTAATAACAAAGAAGAAGCT 752745 46 100.0 30 .............................................. CTTACTTTATCTAACCAGGCTATGGCAGCG 752821 46 100.0 30 .............................................. TTTTCCAGAGTTTAAATCATCAGATAGTGA 752897 46 100.0 30 .............................................. ACTTTCTTTGGGTGTGCTGTATCTGGTGTA 752973 46 100.0 30 .............................................. TGCTAAAGGCAAGGAATTAACATCAACCTC 753049 46 100.0 30 .............................................. GTAAAAAAGCTTCGCATGCGGTGGCTATGG 753125 46 100.0 30 .............................................. AAAACCGCCTGAATTAGCATCGTAAACAGT 753201 46 100.0 30 .............................................. TCCAACTTTAAATGATGTGGCTACATATAG 753277 46 100.0 30 .............................................. AAATGTCAGTTGCACTTGCTCCACCTCCAG 753353 46 100.0 30 .............................................. ACATGTCACCAAATTATGAACATATGGTGA 753429 46 100.0 29 .............................................. CTTATGCTGATAAGGCCCAATCGAATCTT 753504 46 100.0 30 .............................................. GTATGTTGAAGTAAGCGTTTTAACTATTGA 753580 46 100.0 30 .............................................. GCTGTCTATCTCTTTACCAAAGGCTGTGGC 753656 46 100.0 30 .............................................. AGAATGGACATTATTAAAAAATAATAATGA 753732 46 100.0 30 .............................................. TTTCAATTTGCATTTGCAATTTATCAGCAA 753808 46 100.0 30 .............................................. CTGAATACTTAACTAACACTAATTCAGATG 753884 46 100.0 30 .............................................. ATCCGCCCTGGTTTGCAACTTCATCCCATT 753960 46 100.0 30 .............................................. ACATTATCAGATTAAACTAGGTAAAGGATT 754036 46 100.0 30 .............................................. GTTAATAGTTGATGAAAGGGAGGCGGATAT 754112 46 100.0 30 .............................................. AAATAGTGTTAATATTACTGCTTCCCACAT 754188 46 100.0 30 .............................................. CTTTTATGACGCTAACACTGTTGTTTCTAA 754264 46 100.0 29 .............................................. AAAGTATAAAAGAGATGCCTATAGCTCTT 754339 46 100.0 30 .............................................. TGATTTTTCTATTCAGGCATCTCAAAATAG 754415 46 100.0 30 .............................................. AGTTTTACCCAAAGTATTATTGTATTGTTC 754491 46 100.0 30 .............................................. TTCCACAGGCTAAGCAAGTTTCATCCGCAA 754567 46 100.0 30 .............................................. TAGGCATGCCTTTACCCACACCCATATCTA 754643 46 100.0 30 .............................................. CCCAACCCAAGTATCACCATAGCCAAAAGC 754719 46 100.0 30 .............................................. CCTCGCTTAGTTGGTGGCGAAGAGATAGAG 754795 46 100.0 30 .............................................. GGATTTTCATTTACGTAATTGTTTTTTAGG 754871 46 100.0 30 .............................................. GCTGTTGTGAAAATGTCGGTGGCAATTACT 754947 46 100.0 30 .............................................. TTGTTATTTTGAAGTTGTCGAAGCCGTAGT 755023 46 100.0 30 .............................................. TTCTTTATTTCGGTTGTGTGTGGTTATGCC 755099 46 100.0 30 .............................................. GAAATTTCATCCCAAACAATATGATTTCCT 755175 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ================================= ================== 138 46 100.0 30 GTTGTGATTTGCTTTCATTCTTTGAACTACTGATATTTACAACAAC # Left flank : AAAGCCTAATTGTAGCGGGGAATAATGTGTAATTTTTACCTCAAAAATTTTCATAATAAGCTAAAATTATCTTTAAAATAGATGTCTTTGGTCTTTATTTTCAGTTGCCAACTGCCAGTTTTTTAGTTGTGAGTTTCAAGTTCTGGGTGTAGAATTTCCTGTTTTTTACTTTTGAATTTTCCCTTTTCCCTTTTGAATTTTCCCTTTTTAACCAGAAAAGCCCATTCCATACTACTATCATCCGCCAGTCCGGTGCTTTGCTTAACTCCTCGTCCATTTTCCGCAAAAGCTCCAAATGTCCTGTGGGGTATCGCCCTCGCCCCGGTTTAGTTGGGGTAGGGTTGGTGCTAAACGCAGCTAAAAGTTTAAAACCTTAGCTATTGGAAAAAGACTAACTGTTTGTAGTGAGAACTTCCTAAGGTTGCATCCTCATTATTGTCTTTATCACATGATTATTATAGCCACGGGTTTAAACCTGTGGCTATAGAAACAATATGAGA # Right flank : CATACCTTGGTTTAAAAAATTGTAAATCAGTATTTTAAATGTAAAATCAGGAATAAAAAAATCCGGTCAGTTTATCTTCCGGATTTTTTTATGTTCAATTTTTTTCTTGCTATCAACTTGCTTTAAAATAATTCTAATTGCTGTGGGGTACTAGGTAGGTTCTTTTCTTCCTTACCGTAAAACAATTCCATCATTCCAAATTGCTTATCAGTAACGGTCATGATACCTATATGTCCTTTAGCTGGAAGTAGGTTTTTCACCCTTTTTATATGTACTTCCGCATTTTCTCGGCTACTACAATGCCGTAAATAAATAGAAAATTGAAACATAGTAAAGCCATCTCGCATGATGTCTTTTCTAAAGCGAGTATAAATCTGCCTTTCTTTTTTAGTCTCAGTAGGCAAATCAAAAAATACCAATATCCACAAAACGCGATATTGGTTTAAGCGCATTTCCTAAAAAGGTAATTCGGGCTCGTCTGTACTTTTTTTATTTCCATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTCTTTGAACTACTGATATTTACAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCATCCTTTGAACTACTGATATTTACAACAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.10,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //