Array 1 4246498-4243991 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV440952.1 Neobacillus drentensis strain FJAT-10044 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 4246497 32 100.0 34 ................................ GTTAAAATGAAGGCGAGCGCCATCGTTAAGTCTA 4246431 32 100.0 33 ................................ TTTAATCCTGGTCTTCCCCACGCTAACCATCGT 4246366 32 100.0 34 ................................ TTGACGGCTGACTGCGAAATGGCTGGCGTGGTAA 4246300 32 100.0 35 ................................ CGAGCAAGAACCATCGCAAAAAATGATTTGCCACT 4246233 32 100.0 34 ................................ AATGATATGACAAACACTCCATTTTCAGGTTCTC 4246167 32 100.0 34 ................................ AGCAAGCAACAGATCAAACAAGAGAATCCGTATC 4246101 32 96.9 33 ..T............................. TTTGATAAGAGTCAATTGGAAAGTCAATTTAAC 4246036 32 96.9 35 ..........A..................... AATCTATTTGATTCAACATTGTCAATAAATGTACG 4245969 32 100.0 35 ................................ TCTAATTCAGCCCGATGAGACATTTTCTTTTTTAT 4245902 32 100.0 34 ................................ ATGCGATGGACAGTTGCGCCGACATGCCAATCTG 4245836 32 87.5 35 ..........AT....G..............C TTGGTGAGCGGCAAACCCTATTGTGGGTGCTGCAA 4245769 32 100.0 33 ................................ ATCATCTTCTCGTACTTGTCATGGTCGCCTTCT 4245704 32 96.9 34 ................G............... CAGTAGTTGCCTTTGTTGTTCGCTTGGTCGGACG 4245638 32 96.9 33 ................G............... AACGTAGATATGGACCATGTTGCTACCACATCT 4245573 32 96.9 34 ................G............... CAGTAGTTGCCTTTGTTGTTCGCTTGGTCGGACG 4245507 32 96.9 35 ................G............... TTTTCAATATAGACGTAGTAGGCGACTTTGGACGC 4245440 32 96.9 34 ................G............... CCAATATCAGTAGATTCCCTTGTAGATCATCCAT 4245374 32 100.0 34 ................................ GTTAATGTTGCGATAAGGGCTGGCGATAGTTCGG 4245308 32 100.0 34 ................................ ATCATGATTTCATTGTGAACGTCCATGAGGTCTT AT [4245296] 4245240 32 96.9 33 ..........C..................... AACAAGGTAAATAGTGATTTAGAAAGGCTCGCA 4245175 32 93.8 33 ......C......G.................. ATGGCATGTAACACCGGTGGCGTTGCCCAAAGT 4245110 32 81.2 34 ......CT.GA....AG............... TCCATGATTTGAATAGCTACTTGATCGTTAACAT 4245044 32 84.4 32 ......CT..GT....G............... TCGTAATAGAGAATTATTCTCGGATTCTTTAA 4244980 32 96.9 34 ................G............... CTATTAAGCTCTTATGGTGTTCGTCGTGCGTACC 4244914 32 93.8 36 ..........A.....G............... GAGCATATCGTTGTCCAACCTAAAATGGAGTTAAAA 4244846 32 93.8 33 ..G..........G.................. ATATTAGTTAGCCTCCGTCAAACTTTATTTCGG 4244781 32 96.9 27 ....................A........... CATGATCATGAGTTAGCAGCAGTTGTT Deletion [4244723] 4244722 32 93.8 36 ..........C....................C ACGGGAGGGGATAAGGCATTCCCGAAGTTATTTAAA 4244654 32 93.8 35 ..........A..G.................. GGTCAATTCGAAATCGCTCTTAATAACAACTTGGC 4244587 32 81.2 34 ......CT..G....AG........A...... GTTAGGGTTGCAACTGAACTATGTAAGAGTAACA 4244521 32 81.2 35 ..T.T.CT..A....T................ GGTGAGAAGGACGGCTATGAGATCAAGGACGAATT 4244454 32 78.1 34 ......CT..G....AG...A..A........ CCATTGTTGCAATCCGATAACATCATAGGGAATG 4244388 32 90.6 33 ..........A............A.......C GACTGCTTGCAATCGGAAGTTGAAAGTATTAAA 4244323 32 84.4 36 ....T......T.A..G..............C ATGGATGGTACAGCGATCCAGGCAGAGAAGAACGAA 4244255 32 81.2 35 A.......T.AT..A.G............... AAGTCATTGGATTGTTTTCAACAAATTGACGTATC 4244188 32 100.0 35 ................................ ATCTAGAATCGACATATGAGGATTCAAAAAACCAA GACT [4244171] 4244117 32 84.4 0 ...........................TGTCG - Deletion [4244086] 4244085 28 68.8 34 ----..CT..GA...AG............... CCGACGGTCCGTTTGACCATTGAGCAGGGAACTG 4244023 32 81.2 0 ......CT..A....AG...........G... | G [4243993] ========== ====== ====== ====== ================================ ==================================== ================== 39 32 92.9 33 GTCGCATCCTTCATGGATGCGTGGATTGAAAT # Left flank : CGGGTTTTACTGAAGCTGACCTTCAATTATTATGGGATGCTTTAACTAATATGTTTGACCATGACCATTCCGCAGCTCGCGGGAAAATGTCTTCTCGTAAACTTTATATATTTAAACATGAAAGTGTTTTAGGGAATGCACCTGCTTATCAATTGTTCGACCTTGTGAAAGCAACAAAGAAGGATGAAACTCGTCCTGCCCGAAGTTTCTATGATTATCACGTGGAAATTGAACGGGATAAGATACCTGACGGAGTGACAATGATCGAGAAATAAAACATTAATTAGAAATGTAAATACCGGTGGAGGCAAGAAGGTCTTTAATATTTTAAGTGCGAATGTAAAGCTCACATAAAATACCGGATACATTCGCACCAATATTTTCATTTTGTAAGTCTAATTTTGCGTGTCATTTATCAAGTTCTTTACTCAAGTAAAGAGAATAGCGCTTTTTTTAACTAAAATTTATTATTATTAATGTCTTTTTGGTTAAGCTTCGCC # Right flank : ACATGCGATTGGTGGGGACTTGCAATCTATTCAAGTGTTTTCTTCGGTTCAAAATGTTCGAAAAACAACTTTATTGCATCCCCCCTCCAATTTCCTTTATTTTGACCCTAGGTGAAAAGACCACGCCCGAAAGTCAGCGAAAAAAAATTTCCCTAAATGAGAATTCTTCTCACTATCCCCACGTCTCTCAGAGCCTCTCAGACGAAATTAGGTTTTGTTTTGTTGGAGTGGATAATAGATATAATTGTTAAAATATAAAATATGATTGTGAAGGTTTGTACTTAAACTGGTTAGGTTAGCTCAATAAGGTATACATAAAAAACTAGATTTTATGGCCAGGTTATTAAGGACCTAGTAAAATATAAAATCCCTCGAAGTTTAGAGCTATTCGCTCTAGGTAATTTGTGGTATTTTTAATTCAAAGGATTTAAGTTGCTTAATGAAAGAGGTAATGCAAGATGGGGAAAGTATTATCAGGAGATTATAGCGGTTGTTCGATA # Questionable array : NO Score: 8.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.65, 5:0, 6:0.25, 7:-0.07, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTTCATGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [61-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //