Array 1 290436-289530 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNUH01000002.1 Thermococcus sp. M36 NODE_2_length_517790_cov_27.269109, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 290435 30 100.0 36 .............................. CACCCGAATCTCACACTCTATGACTGACTGAAAAAA 290369 30 100.0 37 .............................. CGAACATGAGCATCACGAGCGCCGAGAAGCTCCTTTC 290302 30 100.0 37 .............................. TTCCTCCTCATCTCGATGAGCAGCTCATCTGAAGCGG 290235 30 100.0 39 .............................. AACTTCCTCGACCAGTTCAACACTACTGAGGATGTCAAG 290166 30 100.0 37 .............................. ACTTTTGGGCGAACTCCCGCGCGTACATCCTCTTGAT 290099 30 100.0 38 .............................. ATGAAGCCCAAAATAGCCCTGCCTGAGAACGAGTTCAA 290031 30 100.0 37 .............................. CATTACCTCGCGCCCGGTTATCTTGAAGAACGCCGGG 289964 30 100.0 38 .............................. CATAGAAGTGGGGTCTTATGGGACCCCGGACATCATAG 289896 30 100.0 39 .............................. CAAAGAACCGACGTACAAAGGAGTTCTGGAGGCCATTGA 289827 30 100.0 36 .............................. CCAGAGGCCGCCCAGGAGGGGATAGGGGTGTCGGAA 289761 30 96.7 38 .............................T GCAGTCATTCTTCTATCGTGACGCCTCTCTTGCTCTTC 289693 30 100.0 36 .............................. ACTATTCTGTGCAGTACGGGATTGACCTCAACTACA 289627 30 100.0 38 .............................. GTTCGGGGCGTCGAAGGGATTGTTGGCGTAGAGCGGAG 289559 30 93.3 0 ........................C....A | ========== ====== ====== ====== ============================== ======================================= ================== 14 30 99.3 37 GTTGCAATAAGACTCTAGGAGAATTGAAAG # Left flank : AATTTGGGATCTCTGGATTTAACGTTTGTGGCGTATCACGCCTGGAACGCTTTATTCTTTGAAACGGGTCGTTGAAGGGACCAGAACCTCAAATAAGCCCTCCCCCGTGCTCTGGAAATCGATTTTTGAGCTTTTTAATTTGTAACTTTTTGTTGCATATCTTCTATAGTCATGTGACGAAATATTTTCGAAAAGTGGGACCGAGCCATGGTTGGACCTGGATATGCCCCTCTCTTTAGGAGATACGTCCGTTCCTTCTTCTAGCAGTAGATGCTGTCTATTCGCGAATTTACAGCCCGTTTAACCCTTTGCATTACCCTGCAGTGCCCATTGGTCCTGTGGGAAGCTCGTTCCAGGAGCATTCTTTATGGGAGTTAAAGCGCTGAAAAGGCTCGGATTCGAAGCCTGATGGAACCCTTTTTTTCATCGGTTTTCAGAAAGACTTAAATATTCGAAGTCTCTCAATACTCCAATGGGCAAACGGGCGAATTTTCCGTCCT # Right flank : ACAGAATTAAATAAATCATGAATTAGGTAATTCTTTAGCCCCTCACCCTGCATCGGACACTTCCATTTCTATCACGCGCTCGAATACTGCCCTATGGTTTCCAAAGGCCTCGAACATTCTGCCAGAGTAGCTCTCTGAGGCAGTCTCAAGGAAGTGCCGCAGGTTGTGTGTTATGGACTCGTTCATCGGCACATGAAGGGGCACCGGTTCGTAGTAGTCGAGGCCCTTCATCAAGGCGGTTGAGAAGTACCAGAGCGTTTTTCTGACCTTCCTTCCCTTTATTCTGGAAAAACTGGCTTCACCGCAGTTGAACGCCGCATGGAGCACTACGATCATGTCTATTTCAACACCCTTCTTGAGGAGCCTCTCCCTTTCGGGGTCTCCCCTCAGGTCTTTTATCCTGTATCCGCTCCGTGTCTGTTCGTCATAGGGCATGTCAACGTCGTATATTCCACCCACCCTCGGGTCGTAGACAAGAACCTCCGTTCCTCCGACTATAT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATAAGACTCTAGGAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 353567-355217 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNUH01000001.1 Thermococcus sp. M36 NODE_1_length_1390874_cov_37.336022, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 353567 30 100.0 37 .............................. TGAACGAGATGGGCATTAACAAGTCGCAATTCTTCAA 353634 30 100.0 38 .............................. AGGTTCTCCAGAGCTTGGCGTCGGCGCTCCAGCAACTT 353702 30 100.0 37 .............................. GAGGAGGCGTGGTGGTTAGGGTTAGGAACAGAATCGA 353769 30 100.0 38 .............................. CATAGTTAGGGCCAGTCACAAGGACAGGTGTGTCTTCC 353837 30 100.0 38 .............................. GGCGTGGTAGGCGTAGATGAGGATGTCGTCGAAGTCAA 353905 30 100.0 39 .............................. GACTCCGGCTACGTGCTGGCGCTGTCATACATCATACTC 353974 30 100.0 42 .............................. TGCCGGCAGAACCGACGATGTAGCCGAGCCAGGCCGCATCTC 354046 30 100.0 38 .............................. TTGAAATCGCTCTTCCGAGCGGCGCCAGCTCCTTCACC 354114 30 100.0 37 .............................. TTTTATCCCCGGCGTTGGCCAGCCCGCTCTTGGCGAG 354181 30 100.0 37 .............................. CTTGAAGTTGTCCCAGAGCTCCTTAACGAGGTTGCTT 354248 30 100.0 38 .............................. GAGCCTTCGAGTCCAGAACCAGCACCTTCGGCGAGATT 354316 30 100.0 38 .............................. GTGGCGTCCAGCAGTCCCTGGAGCTTGAACCCCCTTGA 354384 30 100.0 36 .............................. ATATTTTTTATTTTTCGGGATCATTGCTTTGAAATT 354450 30 100.0 38 .............................. TGAGCGCCATCGGAAAGCCCTCGACGGTCAGGAACCTC 354518 30 100.0 39 .............................. CATTATAAAGCTCCCACGCCGGGACTTCCGGGATGTCAG 354587 30 100.0 37 .............................. AGAGGAGCCCCCGAAAGGCCTTTCGCTCGTGTATAGG 354654 30 100.0 36 .............................. AATGCTTGAGCTTCCAGCCTATGAAGGGCAACTCGG 354720 30 100.0 38 .............................. GAAGACCGGCCTGCTCCTGGCCCTTGCCTATATCATAC 354788 30 100.0 37 .............................. CTCTCCTCATCGCTCGGAGCAAGGTGTAACATTTCGG 354855 30 100.0 36 .............................. AAGAGGTAGGTCGTCCTCTTGATGACCTTGATGTCA 354921 30 100.0 37 .............................. CTTCTTACGCTTGAGGACGAAGCTCATTCTTTCACCT 354988 30 100.0 37 .............................. AAAGTTTGATATTCGTATATCACTGTTTGTTGGTGGT 355055 30 100.0 37 .............................. GTAGGGGGTAGGATTGTGATTGTTTCAGTAGAACCAG 355122 30 93.3 37 ............................GA ATATTTCCATAATGTCGGCCGTATCGGCGCCCGCCTC 355189 29 80.0 0 .................CA....-CC...T | ========== ====== ====== ====== ============================== ========================================== ================== 25 30 98.9 38 GTTCCAATAAGACTCTAGGAGAATTGAAAG # Left flank : GGAAGCTGAAGGAACTGGGCTTTGAGGTCATATAACACACTGAAAGGTTCTCTTTTTCAGAGAATTCCCGTCTGAATCAATATTCTCTAAGAAGAAGTCGAGTCTAACGTCAGGGAGTCTTTAATAATCCATTGTTAGTATCTGACGAATTGTTACACAAATTCAGGTATTTCATGACGAAAATTTTTCAAGGTCTCCAAAAAGGCCCATTAAACACGCTAATGAGTCTACCCTCAGATTAAATCGTTCATTTTTAGGATTCCGACCGTTAAAATATCATAACTGCAGATCGGGCCCTTCTTTGTCCCCCGGAAGTCTCATGAACATGGTTGTCCATAATTTCGGAGGCGCTGTAGCATGTCTGGGCTACACCACCGCGCCATTTTCCCGCCCCGAAAAGAAGGGCGGAGGTACCGTTTTGAAGACCTCTCTGGAGTAAAGCTTATAAGAATTGGGCCCTCTTATCCTTTTGTATGGCAAAAGAAGGAAAAAGCCGCCCT # Right flank : TCTATAAAAACTCTGAGAACAGCAAGTCCTCCTTTCTTCCCCCGGCTTTTCTGAACACCTTCTCGCTCCATCCAACGTTCCCGATGTCCTTGGGCCAGTGGGCGTCGCTCGAAAAGACGAGCTTTATCCCGCGCTTTATGCACTCCCTTACGAAGTCCGGCTCCGGGACTTTGTAGCGGGAGCTTATCTCAAAGGCCTTCCCTTTTTCCTCGGCGAGTTCGAGGACTTCTCTGATGCTCTCCTCGCTCGGGTACCCAATGTACCTAAAGCTTGCCCCAAAGTGCCCAATTATATCAACGCTCTCATCGAGGAGCGCAAGCTTGACTAGCTCAATGTACTCCTCCGGGTCGTCGAGCCACAGGTGAACGCTGGCTATCACGTAGTCCAGCCTCTCCCTCATCCCGCCGGCAACATCAACTCCACTGTGGGTTATGTTGGCCTCAATGCCTGCCAAGAGCGTTAGCTCTGCCTCCTCCTTCCATATCTCTATCTCCCTCACA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTCTAGGAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //