Array 1 13796-13120 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADQUQ010000013.1 Corynebacterium diphtheriae bv. mitis strain 15-14 NODE_13_length_52789_cov_43.324617, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence             	Insertion/Deletion
==========	======	======	======	====================================	============================	==================
     13795	    36	 100.0	    28	....................................	CACGTACCCAGCTGGATACCAGCGCAGA	
     13731	    36	 100.0	    28	....................................	CACGTACCCAGCTGGATACCAGCGCAGA	
     13667	    36	 100.0	    28	....................................	TATACAATGCCGGATGGTAGTCAGACCA	
     13603	    36	 100.0	    28	....................................	GTGTTTAATCGCAGCGCCGCGTTGCACC	
     13539	    36	 100.0	    28	....................................	GCCGTCCAATCGTCCCCTTTCGCCCCTT	
     13475	    36	 100.0	    28	....................................	CCGCCAGTGCTCAACCACTACTTGCCAG	
     13411	    36	 100.0	    28	....................................	GCCGTCCAATCGTCCCCTTTCGCCCCTT	
     13347	    36	 100.0	    28	....................................	GCTTGAGGCCGAGCAGCCGCGCTTACAC	
     13283	    36	 100.0	    28	....................................	CTGAGCCATCGTTCTTCTACCCCTCAAA	
     13219	    36	 100.0	    28	....................................	CTGAGCCATCGTTCTTCTACCCCTCAAA	
     13155	    36	 100.0	     0	....................................	|                           	
==========	======	======	======	====================================	============================	==================
        11	    36	 100.0	    28	GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC	                            	       

# Left flank :   ACACCATTACTTCATCAAGTACTACATCTGTTATTGCAGAGATGGTCTCATGGGAGATGTCCACCCGCATAACAGTGGCCATATGGTGCCTGATATCGCGCACGGTCATCCCACCGGCATACAAGCTCACGATCATGTCATCGACATCCGTTAAACGCCTCGAGCCCTTGGGAACCATCGTCGGCAGGAACGTTCCGGCCCTGTCTCTGCGCACATCTATGGTCACTGGCCCGTCGTTGGGATCAACAGTCTTTAGGTAGGTGCCGTTGCGATAATTGTAGATCCCAGCAGCAGCTTTAGCTTCGCGATTTCAGCATGAGCAAGCAGCTTTTCCTCAGGTCGCGTCAATCTTGGCCTTATCAGCCGAGTCTCGTCTTACCACAGTAGTCATTCTGACTTATCTCCTTATGCGGAATAGAATCCCAAACACAAACCATCAGGCACCCTCATTCCCAAAAACCCTGATAAACTTCTCCTACGGTTCATCCCCGCTGGTGCGG
# Right flank :  AGGTAGCCCAAAAAATCCTGTTTAACATGGTTTTTTGGGCTACCTGAAGTCTAAAAAATCGCGAGTTGATCAGGCTTTTCTTCGCCAGAAACCTCTGCAGAAGAAGAAAAACGGATCATCTTCGACCATTGGATGTCCGATACCGAAAGGATTCGAACATCCCCACCTGGGGGTAATTTTTCTTTAATTAATTTCACCAAATTAGATAACTTTGCGGCCAGAGGCAGGTACTGCACATATACACTCAGCTGTGCCATACAGAATCCAAGATCTAAAAGATTCTGACGAAACGCCGTTGCTTGCTTTCGCTGAGTCTTTGTCTTCACCGGAAGATCAAACATCACCACACACCACACCGGATCGCTACCTTTCTTCGGCATCGAAGGGACCTTCCCAAATAGGCGGTACTAATTTCTCAACATCACCTTCCACATACCGCCCATACTGTTGAGCGAACGCGGTAAAAACCGTCGGAATTGACTGCCCCGCAGAATTGAAAG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:52.78%AT]
# 	Reference repeat match prediction:         R [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.20,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [63.3-45.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.64,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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