Array 1 76260-77615 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVSU01000009.1 Streptococcus anginosus strain p35gc p35gc.s10-trimmed-pair1.paired_contig_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 76260 36 100.0 30 .................................... CATCAAGGCTTGTCAAAATACAATATTTTA 76326 36 100.0 30 .................................... ACTTGTTAATTATTACATCTGATAATGCTA 76392 36 100.0 30 .................................... GTGCAATTGCTGAATCTGTTCAAGGGGCTA 76458 36 100.0 30 .................................... AGATACACAAGCAGATACTTCAAATCCTAT 76524 36 100.0 30 .................................... ATATAGAGACGGTTTGTTATATCATCTGCA 76590 36 100.0 30 .................................... TAGCGTTCGTTTCATGAATGCTTTGTATTC 76656 36 100.0 30 .................................... TTTAGGAGACGTTGGAAAACGGGCAACAAA 76722 36 100.0 30 .................................... TGACGACAGAATGCGCAACCACCCTCGCCA 76788 36 100.0 30 .................................... CTTAAGGTTTGAGTAAAACTCACGCAACAA 76854 36 100.0 30 .................................... CGAGCCTAGTTTGCTTGATAGGATTCTAGC 76920 36 100.0 30 .................................... CACCCATAAATATTGCAGGGTTTGTAGGTT 76986 36 100.0 30 .................................... AACAAATTGGGAACAAAAGTATTACGGGAC 77052 36 100.0 30 .................................... CTGTTGCCATGCATGAAAGACAATCATTGC 77118 36 100.0 30 .................................... TATATGCCATCAACAATGGCAGGTAATGCT 77184 36 100.0 30 .................................... TAATAACTCTATAAACAAATCAAAATCAAA 77250 36 100.0 30 .................................... GTGTGTTGATTTTATTGTGTTATTTGGAGA 77316 36 100.0 30 .................................... AACAACAAGCTTTGAATAAAGCACGTGATA 77382 36 100.0 30 .................................... CGCTTCCCTGCGCTTGAATTGGTCTTGTAA 77448 36 100.0 30 .................................... AATCGGAGGTAATGGATACTTCAAGAGCTT 77514 36 100.0 30 .................................... TTGTTGAGTTTTTTTACAAGGCTAATAATT 77580 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACAGTTGAATGAAAAGCCTGAAGTGAAATCTATGTTAGAAAAATTAATTGCAACTATTACAGAACTAATTGCTTTTGAATGTTTAGAAAACGAGCTGGATTTAGAGTATGATGAAATAACAATTTTGGAATTGATTGATGCTTTAGGTGTAAAAATTGAAACACTGAGTGACACTGTCTTTGAGAAAAGCTTAGAGATTGTTCAGGTGTTTAAATATCTTTCTAAAAAGAAACTGCTTGTCTTTGTGAATGTGTCATGTTATCTATCTGAACATGAACTGGCTAAATTGGTAGAATATATTCAACTAAATAATATAGATATTTTATTTTTAGAGCCGAGAAAAGTATACGATTTTCCCCAATATGTAGTGGATGAGGATTATTTTTTATCTTGTGAGAATATGGTATAATATTAATAAATATAAGGAATCATTTGAGCTGAAGTTTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAG # Right flank : CACAATACATTTTAATCATAGGGCTTGCAAATTTTTCCAATCGTGTTATAATACTTTTTAGAGACATATCACCTACAGGAAATCTTTCAGAGAGCGTGTGGAGCTGGGAATCACGCAGAGGATGTAGCTGGGACTACTCGATTTGTTTTTATGCAAACATAAAACGGTGGCTACGTTAGAGCCAATCAGAGGTGTCAACAAACTTTTTTGTTGTACATGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTAGGATTGCCGCTTTTTATTTTGTCGGAAGGAGAAAAAGTTATGCTCTATATGATTGGCGGATCACCCTGCAGCGGGAAATCAACGCTCGCTTCCCTTCTTGCTCGGAAGTACGATCTGCTTCATATCAAGTTGGATGATTTGGTAGACGAGATGATGAGTCAAGCAAGTGTAGACTCACGACCGATTTGCCTTCTTAGACAGGACAGAAATCCGGATCAAATCTGGTTGAGAAATCCAGAAGAGATGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //