Array 1 174724-173866 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABCJM010000003.1 Niveibacterium sp. COAC-50 3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 174723 36 100.0 36 .................................... GGTAATAACTGGACTCTGTTCATCTCTTAGAACAGA 174651 36 100.0 33 .................................... GACATTATTGGTCCGCCATTTGGAGGTGAGTCG 174582 36 100.0 33 .................................... AAGACGACCGTGACGGACGGCTTGAACAAGTGC 174513 36 100.0 33 .................................... TCCCTTGCGATCTCAGCCAGCGCTGCTAGCGCG 174444 36 100.0 31 .................................... TGTTTCGTCGACATGTAGGTGACGAACTGGC 174377 36 100.0 33 .................................... TCTTACGGACACGCGGGTAGCTCTGCGTTCTGG 174308 36 100.0 33 .................................... TTTTTACACGTTTAACAAGTAGGTCGTACGCGG 174239 36 100.0 30 .................................... ACCCGGATCCAGCCGTTACAGTACCTTTCG 174173 36 100.0 33 .................................... TTCACAGCCTCACCGAAGAGGTCAGACTGAAAG 174104 36 100.0 33 .................................... CATGAACGCGTCCAATTCCGCGAAATGCTTATG 174035 36 100.0 31 .................................... TAGATCGCGTTGCCTCTGTTCTTGAATGCGA 173968 36 100.0 31 .................................... ACGGCCGGCGGCAATTGCGAGCATGGAGCTA 173901 36 94.4 0 ................................C..T | ========== ====== ====== ====== ==================================== ==================================== ================== 13 36 99.6 33 GTGCGGACTCCCGGATTTACTCAACGGGATTGAGAC # Left flank : CAAAAGGGCATGGGCTGTCTCCTGTTTATTCGAATTTGATGTGGCGGAATTCATTGGCCAGATGAGACCCAAGCATGCCAGCGCGCCGCACGGCGAGTCACCCTGACAAGCTTGTCGAACCCAATTGCGCAATGCCTGGCCGGGCGCCGTGCGAGGCCTCGCCAGCGGTTCGCCTTATCGCTGGCGAGGCGATTACCTGTCAAGCATTCAGATCAGGAGGATTGCATGTTCAGCGCACAACTGCGCGAAGCCGGATTCCTCGCCGATTCAATAAAGGGGGGCGGTGTTGGCTTCCGCTTGCCGCGCGCGCGAAGCGAGTGTTAACGTGCCGATGCCCCGACTGGAGCAGAGTGGAAAAATACGAAGTAGCGCCGATGATTGATTTATAAAGAGAAAACCCGCTTATCCACAGCCCAGCTTTACCCTGGCGTCATAAATGCTCATCCAGCGCCGTAAACCACCCCGCAAAGCCTTGACTGGCGCGGCTTCCAGCGGGTACT # Right flank : GTGTGGTTTACCGGGGTTACCTGTGTATCGCAGCGTCTTCCGCTTGACGCGTCGGCAGGGCTGCCATGGGGCCTCGCCAGGGGCATGTAACCCTGCTTGGCGGCGGGCATCTGCGCTTCGCGGTGTCAGGGAAGGTAGCGCGTCACCGCCGGGGCCATGACACGCGAGGCGGTTCCGTTGGTGGCGACTGACAGTTCGCCGGTGACCAGGATGCGGCCGGCGGGGTCAAGCGCGAGGGTGTAGGCGTACTGTGCCGGGTCGCTGCTGTGTTGCCCGCCCAGACGCAGGCCGTTGGGGCCAAAGGCTTCGTCCGGCGTGCTGTCGGGCAGGTAGCGGCGCAGTTCGGTGGTCTTGATCGGCATGCATTTCCCGATGGGGTCGTCGAACCAGACCGGCACGTAGGTGTCGCCGACGGTGAGGATGCGGCCTGCCGCGTCGATGACCAGCGCACGCGCCGCGTTGAACAGCCCGGGCGAGGCTTCGGCCGTGCGCAGGCCGCG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGGACTCCCGGATTTACTCAACGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 187841-189512 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABCJM010000003.1 Niveibacterium sp. COAC-50 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 187841 36 100.0 32 .................................... CAGCGGGGTACGCCAGACGCAAACGGTGTTGA 187909 36 100.0 30 .................................... GTAACCCAGCATTTTCAGGTCAAGGTTCGG 187975 36 100.0 32 .................................... CCTTGCGGCAGACGTTTTTGACATAGAGCCCG 188043 36 100.0 34 .................................... ATGAGATGAGCAAAATGCGCACCTCAGAGATGTC 188113 36 100.0 33 .................................... TCCGGTGGCTCGCCATCCGCGCCATCAATGAAA 188182 36 100.0 33 .................................... CACAACGACACCACCGAGCGTCATAAGAATAAA 188251 36 100.0 32 .................................... TCTGAGTCAAATGCGCACAGCAAGTGATACGC 188319 36 100.0 32 .................................... AGAAGGCGGCCGATTACGGTTGTGTTGTCCAA 188387 36 100.0 33 .................................... GGAATCTCTTCCCGGCGCCTGACAGCGGTAGAG 188456 36 100.0 31 .................................... GCCTTGGCAGATGCGCCCGGCGTATATACGC 188523 36 100.0 35 .................................... TCGAATAGCTTGCGAATATAGTTCGCATCTAAGTC 188594 36 100.0 32 .................................... CGAACAAGCGGCTTATGCGGGTTGTAGATGGT 188662 36 100.0 31 .................................... CAAAGTGCCGATGGGAGGCCTCAGAAACATG 188729 36 100.0 33 .................................... AGTTTCTTTTCCATCACTATCTCCTGAGAAGAT 188798 36 100.0 32 .................................... ATGCCATCGGCGGTCGGGCGACCATCAGCAAA 188866 36 100.0 32 .................................... GCGCCGCGAGACGCGAAGCAGTGGAGGTTGCC 188934 36 100.0 31 .................................... TGGCAGCCAGGGTTCCAGTCTGCCACTTCTT 189001 36 100.0 34 .................................... CAGCCGCCTTGGTTACAGCCGCACCGGAGGTAAC 189071 36 100.0 32 .................................... GCAGCGTGGCGATAACTTCACGGACGTATTGC 189139 36 100.0 31 .................................... TGTTACTTCTTACCCTTGCCTTTCGGCGCAG 189206 36 100.0 32 .................................... ATCGAACGTAAGCATTTCGTACTTATGTTGAG 189274 36 100.0 31 .................................... ACGAGTGCGGCGAATGCGAGGCCTACGACTT 189341 36 100.0 32 .................................... TGAACGCGGTCCTCTTTCGAGGGGTTTTCAAA 189409 36 100.0 32 .................................... GTGATATCCGTTTCGCGAACGTCTTGGACGAT 189477 36 72.2 0 .....C..G.T.......G..G...A.A.A.A..C. | ========== ====== ====== ====== ==================================== =================================== ================== 25 36 98.9 32 GTGCGGACTCCCGGATTTACTCAACGGGATTGAGAC # Left flank : CACCCGCGCGAGCCCCGTCGCACTGGATCGTCTGATGGCGCCGCCCCGAGTCGCCCGCGTCGTGGTCGCCTTCGATATCGCCGATAACCGCCGCCGGCGCCGCGCCGTCGCGATCCTTGAGGCCTATGGCCAGCGCGTGCTCGAAAGCGTCTTCGAATGCTGGCTGGAACCACAGCGCCAACGCAGCCTCACCCGCAAGCTGCTGGCCGCAATGCGCAGTGGCGAAGACCTGCTCGCGATCCACCCGCTGCCGGCTGTGGACGCACAGCGCGCCTGGCACATCGGCTGTGGCCCCGGCTTGACGCAAGACCCGCGCCGATGGATTCTGTGCGGTGCCCCCAGCGACGAAACCTGAAAAATCCAAAGTAGCGCCGATGATTGATTTTTAAAGAGAAAACCCGCTTATCCACAGCCCCAGACAATCCTGTCGTCATAAATGCCCTCCCAGCGCCGTAAACCACCCCGCAAACCCTTGACTGGCGCGGCTTCCAGAGGGTACT # Right flank : CAAATAAACGGTCGCACGGAAATGCCGCCCTTTTGTTAACAAGCTTGTGGCGCACATCGGTCTTTGTATCTGGCATTACAGTTCACGCCAGCAAACGGTCGCGTCCGAATCAGATCCGTCAATCAACGTCTCGGCTGACGAGCTCGGCGCGCACCCTTCATCGATGCGTTCATAAAGGAGCTGTCATGACATTGGCCGACAAATTGAAGGATGCCGTCGAAGTGCTGATCAAGGCGGCCAAGGACCTACCCACCGAAAAGATCGCGGTGATCGGCCTGATCATCATCGGAGCAGTAGCGGCAAACCGCAGTGGAACCGTTGGCACGCCCGACGAGACCTAGAGGGAATTAACGATGGCCGCGAGCCTGCGCTTGCGCATGCAACCCATGCGCGGGTGAGCCGCGGCGTTGTGGCGCGCATGGCCATTGCGCGCCGGTCGCCCGCTTGAAAGGGCTTCATGCAGGACATCGGCCGGTACCCCCTCAACACTCACGTGCCAT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGGACTCCCGGATTTACTCAACGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.60,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //