Array 1 542815-539004 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMKG01000002.1 Sphingomonas sp. Leaf11 contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 542814 29 100.0 32 ............................. TGCCAGACGATCCGCGACCTGATCCTGCACGG 542753 29 100.0 32 ............................. CGCGCCAAGACGATGGCGGACATCAACACCGC 542692 29 100.0 32 ............................. ACAAGACGACCACCGTTCACCGGTCTGACGGA 542631 29 100.0 32 ............................. CGTATGATCCGCGAGGCGACCGAATACATCAT 542570 29 100.0 32 ............................. CGTTCCAGCACGACAGTACCGATACCCCTCGC 542509 29 100.0 32 ............................. TACCGGTTCGCGCGGATCACGGTGACCGTAGG 542448 29 100.0 32 ............................. GGCGTTAGCTTCGCCGACTCGATCCACCTCTA 542387 29 100.0 32 ............................. GACTGGGAAGGCACTGATATGACCAAGGACGA 542326 29 96.6 32 ............................G TCAATGCCGCCGGGGTCGAACAACCCGTTCGG 542265 29 100.0 32 ............................. TCGGGGGCGTCGACGGGCTCAATGTCGTGGAT 542204 29 100.0 32 ............................. TACGCCATCGACTTCGATACGGCCCATGGTGG 542143 29 100.0 32 ............................. CGCATCGCCCCGGCTATCGACGGCATCCTCGG 542082 29 100.0 32 ............................. CGGATGGGTCCTGAAAGCCCGCCTCACCGAAT 542021 29 100.0 32 ............................. ACTAGCGTGGGCATCGACTGGTACGTCAAAGA 541960 29 96.6 32 ............................G CGAGTGCGCTGTCAGCGGTGGTTCAAGGATTT 541899 29 100.0 32 ............................. GAGCCGCGTGTTACGATTGATGACAGCGCGAC 541838 29 100.0 32 ............................. GGTCCATCGCCCATGCCGCCGCGTCCCGATGC 541777 29 100.0 32 ............................. CACGGACTGCGGATCAGACGCCGGCACTTGAG 541716 29 100.0 32 ............................. AGGTCGTCCGATCGGCGGGCCAGATCGCCAAC 541655 29 100.0 32 ............................. CCCGGAGGCTCCCCATGCAGACTGACGCAGAG 541594 29 100.0 32 ............................. TCGATGTCGGCATCCAGCGTGGTCGACCGCCC 541533 29 100.0 32 ............................. TTCGACTTTTCCCCGCCGTATCCGGCCGAACA 541472 29 100.0 32 ............................. GGATCGACGGTCAGAACATCGACTTTGCGCTC 541411 29 100.0 32 ............................. GGATCGGGAAGAGGGCTGGTGGGAAACATCAA 541350 29 100.0 32 ............................. GACACGTTGGCCGCCCGCATGTGGCAAGGGAA 541289 29 100.0 32 ............................. AAGAACGCCCTGCGAGTCGCGAGGCGGACGGA 541228 29 100.0 32 ............................. CAGATTGCGGAGGCGGTATGAGCGTTCCGGAA 541167 29 100.0 32 ............................. GCTGGTGGTTGGACAAGGCCGAGGAAGCCCGC 541106 29 100.0 32 ............................. CACCACCTGGCCAGGTGCCGGGCTGGTCGCCG 541045 29 100.0 32 ............................. TACATCGTCGGTTTTGCCAAGCTGGTCGGGGT 540984 29 100.0 32 ............................. TGGACCTGGACGGGGCGGTGTGGAGCATGCCG 540923 29 100.0 32 ............................. ACAATTGACGATGTGATGACGCAGGTTGTCGG 540862 29 100.0 32 ............................. GGCTGCCAATCTCTATCAGTCACCTATTCCTC 540801 29 100.0 32 ............................. GAGGGCGGTCAAGTCGTGCCGCCGGGGCAGGA 540740 29 100.0 32 ............................. TCGCACCAAACCATATCTGGGAGCGGTTTCTA 540679 29 100.0 32 ............................. CCGCCCAGCGGCACGATGCCCGACCTGTAGCC 540618 29 100.0 32 ............................. GTGGACCGGTCATGGTCGCGTGACACCTTCGC 540557 29 100.0 32 ............................. CAGCGCCGGGTGCCTGACGCGCAGATGCCGAC 540496 29 100.0 32 ............................. TGCGCAATCTGCTGGGGGATCTGGAACGGTCG 540435 29 100.0 32 ............................. GAGCCACCGGCATGATCTCGGTAGATCAGGTA 540374 29 100.0 32 ............................. AAATTGCGGGTCGCCTTGTCCTCATGCGTCAG 540313 29 100.0 32 ............................. GGCAATATCGCAGGCCGGGTGGGCACGACTGC 540252 29 100.0 32 ............................. GTCGGTCGTTATGCCAGCGAGGCCATCAAGCA 540191 29 100.0 32 ............................. GACGAGGGGCTGTTCGCATGGCAGCGGACGAA 540130 29 96.6 32 ............................G GTGAAGGGTTTGTCGAATTCGATCGGGAAGCC 540069 29 100.0 32 ............................. GAATCCATGCTCACCGAACAGCGACCCGACGC 540008 29 100.0 32 ............................. TACCGAGCCGGCCCCCGCGCCGGCCAAGGAAA 539947 29 100.0 32 ............................. CTTGCTGCCCATCGACTCATAACCGCCTAGCC 539886 29 100.0 32 ............................. GCTTACCTCCGAAGATCGCGCCCACTTGCTGC 539825 29 100.0 32 ............................. GAGAAGTTGTAATTCGGGGAAGTGCCGTCCCG 539764 29 100.0 32 ............................. TGACTATGGAACTGAAGACGAACGATCTCGCG 539703 29 100.0 32 ............................. CACTCGAAGTCCCGCGTGCCGTTGTCCGTGCT 539642 29 100.0 32 ............................. CTCCCGAAGATTCTGTTCGAGGCGCATATCTT 539581 29 96.6 32 ..T.......................... TGGCGAGCGTCGAGCGCGGCGTTGCCGTAGAA 539520 29 100.0 32 ............................. CGCGCTGTTTCGCGTCGTCGGCGAAGATCACG 539459 29 100.0 32 ............................. TGCCCGGCCGCTGCCCGAACTGCAGCATCGCC 539398 29 100.0 32 ............................. TCGTCGCGGGCTCCGGCGCGCAGGACGTCGGC 539337 29 100.0 32 ............................. GCGCATCACGTCGTGCGGGCCAGATGCTTGCC 539276 29 100.0 32 ............................. GCGCCATCATAGCTTTGGCAGCAGCGAGCAGA 539215 29 96.6 32 ...........G................. GTGTCGGGCACCGGTCTTAATCAATACGCCCT 539154 29 96.6 32 ...........G................. ATCGCGGGCCGCATCGGGTCGACGGCTGCTGC 539093 29 100.0 32 ............................. CTCGGGCGCCTCACCTCCCCGCCTCCCCGCGT 539032 29 96.6 0 .........................G... | ========== ====== ====== ====== ============================= ================================ ================== 63 29 99.6 32 GTCTCCCCCGCACCCGCGGGGATCAACCC # Left flank : ACGGCGCGCCGCCGATCGAACGGCTGGTGCGCAAGCGCGCGGCATTGCTCTTTCGACAGCGCAGCGTGATCCCCGGCATGATCGACCGGATCAAGGCACTGGTGATGCCCGGCGAGGCGGCGGCGACCTGATGCCGCTGACGGTCGTCATCACCCGCGACGTGGAGGACCGCTATCGCGGGTTCCTCGGCTCGGCGATGCTCGAACTGGCCCCCGGCGTCTATGCTCAGCCGCGCATGAGCGCCGGCGTCCGCGGCCGCATCTGGACCGTGGTGGAGGAATGGCACGGCCGGTTGCGGCGCGGCAGCATCGTGATGTGCTGGGCCGAACCCGCATCCGCCGGCGGCCTCGGCCTGTCGGTGCTGGGCGAACCGCCGAAAGACGTAATCTCCCACGACGGCATATTATTGGTCCGCCGCGCCCTGGCCTCCCGCCAGGTTTAACATCATCCTCCCAACAGTCTTTGACATAGTAAACAACTTCCGTAACTTAACGCCTAGA # Right flank : TACGGCCCCTAAACCCCTGCAGCATTTGGCGGCGACCGTACCGGGCCCTTACGACGCTTAATAACAATTGCACGCACTTCTCAGACCCGACCTACGACGACTACGCACCCAAGCATTCAGGGAAATGCAGTTACGAAAGTCATCGGTTCGCCACCGTGCCACCGTTCCCGTACACCGACGGACAGGTCTAATGCACGGATTGCCCCATCGCGAAATGCGCGGCCAACTGCGTTGGTGCCTCGTTGGCGCCGTTCCTGCCTACGGCTTCGCCCAAAGCCGGAAAATCTTGCGCGAGCCCCCCACCATAACCAACCATAAAAGGCCGTGTTCAATCGCATTGACAGATAGCCAAACCAATTCGTCTTAAATCAGCAAAAGCAGTCACGGTAACCATCCGCCGACTTCCGCGACCGGCAGGGCCGCCCTGCCCACCTATTGCGGCGTCTGCACTTCGGCATCCGACATCAGATCACGGCCCTCCAACCATCGCACCACCTCCG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCCGCACCCGCGGGGATCAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //