Array 1 141822-143969 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG704745.1 Lactobacillus jensenii 115-3-CHN supercont1.5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 141822 36 100.0 30 .................................... TACTATTAAAGGTTTGTTCGTAAATGGCAA 141888 36 100.0 30 .................................... ATTGAAAGACAAGTACTACAACATTGTTAA 141954 36 100.0 30 .................................... GCAAATCCTTTCGAATTTCTTCGTCAACTA 142020 36 100.0 30 .................................... TTCTTATAAATGGGTTCCCATTATAAATGC 142086 36 100.0 30 .................................... TAATTATTTCTTTATCGATATCGTTATAAT 142152 36 100.0 30 .................................... GGCATACTCAAACAACTACAGTAAATTTAC 142218 36 100.0 30 .................................... CTCAGATGAAGAAGACAAAGACAAGAATGT 142284 36 100.0 30 .................................... TTACACCTCCATAAAAAATAAAACCAGTGG 142350 36 100.0 30 .................................... TTAACTCCTAAATCAGATCCATTAATAAGT 142416 36 100.0 30 .................................... CGAAAAAGTAACAGTTGCATTAGACGATTA 142482 36 100.0 30 .................................... ATATTGCAAAGCAACTAGCAGTAGGAAAGG 142548 36 100.0 30 .................................... TAATGGAAATTTGGGGTATGTAACAATAAA 142614 36 100.0 30 .................................... GACGAACCAGACGAAAGAGAGTTTTCAAAT 142680 36 100.0 30 .................................... TTGATTGACTCCACTCGTTTGCCCAGACGC 142746 36 100.0 30 .................................... CTTTCAAACCTCTTTTAGCCTGTGGAAGAT 142812 36 100.0 30 .................................... CTCAGATGAAGAAGACAAAGACAAGAATGC 142878 36 100.0 30 .................................... AAAGTGGAATTTCAGTTGGACTCTTTACAT 142944 36 100.0 30 .................................... ATACCGTGGAGATTTGATTAACTGGTATAC 143010 36 100.0 30 .................................... TTCCTTTATTTAGCATCGAAGCCCTCAGAT 143076 36 100.0 30 .................................... ATCATACGTGAAATCAAGAAGTAGAGAGGC 143142 36 97.2 30 ...................................T GAGTAGCCTGCTTAGTGCAATCACTGTATC 143208 36 100.0 30 .................................... CTTATTGTGCTTTTTGAAGTAGTCAGCATC 143274 36 100.0 30 .................................... AGGTGTTTTCCCAGAATTAGACCTTGATGA 143340 36 100.0 30 .................................... TGTCATGTAAGCACCGTGCTTTCTGATAGC 143406 36 100.0 30 .................................... TGGACATATTGTTGCTTTTAAAGCTGATAT 143472 36 100.0 30 .................................... AGACGGTGTAATTGCTAGTTGTGAAGAGGT 143538 36 100.0 30 .................................... TAGAATATCGTCCTTGTTGCTTTGGTTTAA 143604 36 100.0 30 .................................... TCGTTTTAGCTCTTTCAGGTAGTAACTCAT 143670 36 100.0 30 .................................... ACTAGCAAAAGAATTTACTACTATCACTAT 143736 36 100.0 30 .................................... TAATAATGTAAGCTAATTAATAAGAAAACG 143802 36 100.0 30 .................................... AGCGCCTAAAAGAGCTGCAGTAATTTCAAT 143868 36 100.0 30 .................................... TAAAAGTTGCTTTTTCTTTGATAAAGCCTG 143934 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 33 36 99.9 30 GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Left flank : CACAAGATTGTCTTAATTCTTATCTAACTAAAATTATTTCAAATTTATTTGAGAATATAAGTGAAAAGCATCGGAATAGAATATTTGATAAATGGAGGCAACTTAGCACCGATATTCAAGATATAATCTTTATGACTGACTTACCAATTGAAGTCAATGAAAATGTAGATTTAAAAAAGTTATTTAAATTTGATGGAATTCATTTTGATGATTCTGTACTAAGTGATCCTTATGCTATAATTGAAACAGTTGTTAAAATTCATATTGAATGTAAATTGAATTCGGTTGTTACTTTTGCAAATGTAAGTCATTATCTTACAAAAGAACAACTGAATAACTTAATTACCTTTGTAAAAGAAGTAAATGTACCTTTGATATTAATGGAATTTTCATCTCCGAATTTTAAGGTTGTTAGTGGGGATTCAAGAGTCTGTTATATTGATGAGGATTTTGTCGACTGGTACTGATTTACAATCTGAGAAGCTGATGATAAAACGTCG # Right flank : CTGTTAAATTTAAAACTACGTATAACAAAAAGTTTTAGAAGGTTGTAAAACACTATAACTTATAGGAGATAAAAATGGAAGGTTTAGTATATGTTATTCTATTTATAGGAGCTTTTATATATTACTATTGTAAAAATAACCGTAAAAAATAATATGTTTTTAAAAGTTAGGAATTATCAATTTAACTCTGTATTGACTATAATTATTTTGAATGATAGCATAGCAAGAAGGGAGCTAAGCCTAGCTCCTAAAAAATTATTATTTAGTCATTTTATAAATTACTAATAGTTGAGTGATTATAATCAGTAATTTAATAACAATGTCTAAGCAGTCTTTTATAACGGCTATTCTATAGCCGTTTTTATTTTTGTGCTTTTTGTTTTAAAAGACTAGCGAATCCATGATTTAACGAACTCCGCTATTTGTATAGCGGAGTTATTTTTTCCTCTCAATTTAATACAAGTACCAAAGAACTTTGAAAATAATAGCAATTGGTCTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //