Array 1 45665-49389 **** Predicted by CRISPRDetect 2.4 *** >NZ_MQNM01000013.1 Megasphaera cerevisiae strain NSB1 NODE_13_length_58652_cov_30.8231, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 45665 33 100.0 35 ................................. CCCACTGTTTAATATCCAATTACAACGAGGTATCC 45733 33 100.0 35 ................................. ACCACATCCGGAACGGGAACGATCACGACGACCAG 45801 33 100.0 34 ................................. TTACGATCAGCAAAACGTATTTTGCGGCATTGGA 45868 33 100.0 34 ................................. TGCCTTTGGGCAGGATGTGTATATGAGTGATCAT 45935 33 100.0 34 ................................. TTGTGCAACGTCGGGACTGCCCGACAATGTACTT 46002 33 100.0 34 ................................. ATTCTTAGACTACAAAGATAATCCTCGGTTAAAA 46069 33 100.0 34 ................................. TTTGCGTATTGATCGGGATGCAAAAAACGGACCA 46136 33 100.0 35 ................................. ACAATAGGCAGACCATTCCGACACCCACTGCCAAA 46204 33 100.0 34 ................................. ACCCTCAGAAGCTATTTTCCCACAGTGGAACGGC 46271 33 100.0 34 ................................. ATATATGGAGGCGTACCATGACGACAATTATAAA 46338 33 100.0 34 ................................. TAATGTGGATGGGACAGGTTATACTGGAAATCTT 46405 33 100.0 34 ................................. AATGTGTGCCGGAAGCCAGCGGTGATATAATTCC 46472 33 100.0 34 ................................. ACGGCGAAAAAAACGTTTGACGATGAGGTTCCTG 46539 33 100.0 34 ................................. CTGTCAGTAAGGGACTTACTGCTGGATATAAGGC 46606 33 100.0 34 ................................. TGACCGCGGATATTTACAATCAATATCTTGCCGG 46673 33 100.0 34 ................................. ACTGACTGGCGATGCTTCCGGATCAGTTACCTTT 46740 33 100.0 34 ................................. TGGAGAATTATTATATGATGTTCAGGTATTTTAC 46807 33 100.0 34 ................................. GTTTGTGCAATATCCCGCATCATCTAGCTTTTTA 46874 33 100.0 35 ................................. TACTGAAGCATCGTATACACTTTTATTTGTGTATA 46942 33 100.0 34 ................................. GCTTGTGTGGTCTTTTAATGGTTCCTTGGTTAAA 47009 33 100.0 34 ................................. AGAGCTAACTGGATCGGACGCACAAGTGCGTTAT 47076 33 100.0 34 ................................. GCAATTGTAAGCAAATATTGTGCTACGGCTGAAC 47143 33 100.0 34 ................................. ACATATGGAATGATGTTATCTGCCCACTAATTGA 47210 33 100.0 34 ................................. ATCTATTAGGCAATCTATCAGTCGTATCATTTCG 47277 33 100.0 34 ................................. TTTTACAGTGCCCGCCTCAATTAAGGTGATACAA 47344 33 100.0 34 ................................. GCTATTTCCTACATTACCCGTTATCTCAATGTGA 47411 33 100.0 34 ................................. ATCTATTAGGCAATCTATCAGTCGTATCATTTCG 47478 33 100.0 35 ................................. CCTATTAACAATGCCAAATTAAACGCTTTTCGAGT 47546 33 100.0 34 ................................. AAGGATTTTGATGCAATGGCAACCCCTGCGCCTA 47613 33 100.0 34 ................................. TTGTAAATACATCTTTTGCGTAATTGCATTGTCA 47680 33 100.0 33 ................................. TTCGATGCTGTCAAATAGCCCGCTGTTAAAATC 47746 33 100.0 34 ................................. CTTTATACTAACTGCGTAAAAGGATATACGCAGA 47813 33 100.0 34 ................................. AATGCATTCCAAGCAGGCGAATGGATTAATAGTG 47880 33 100.0 34 ................................. TTCTCTTTCTTTTTTCCTCTGCTGACATTTCCAA 47947 33 100.0 35 ................................. AAATATATTGATGCTAATAATTTTATCGCTATTAA 48015 33 100.0 34 ................................. GTCTATCGGTGACAGACCGCGCATTATCAGTTCC 48082 33 100.0 34 ................................. CTTCTTGATCGATAAGAAATACATCTATCGAGAT 48149 33 100.0 34 ................................. CTTTTGTAATACTATATGTGCCAGAACCCGTGCG 48216 33 100.0 34 ................................. AGTGTAAGTATTCCTGCCGCATACGTATAGTTGC 48283 33 100.0 34 ................................. CGCAAAATCGAGTGACCCAATATAATACATTCCC 48350 33 100.0 34 ................................. CCGAACGACGTTAAGTAATTTATATTACCGCAGA 48417 33 100.0 34 ................................. GTATCTAAATCGTGCATAGCTTGTAATACATCTT 48484 33 100.0 34 ................................. GGCGAAGTAATGCCGACTCCGCAATTACTCATGG 48551 33 100.0 33 ................................. TTCCAGTCGGCTCACAGATTATCGTAAACTGGA 48617 33 100.0 34 ................................. TCAACTGTAATAATCTTATTGCTCTCATTGACCT 48684 33 100.0 34 ................................. ACTTCTGCAACAGCTCTTACAAATCCGCTTTCCA 48751 33 100.0 34 ................................. CTTTAACTCCGAGTCTGTCATATTCCGTAGTTCC 48818 33 100.0 35 ................................. AGATCATTTCTGGATGATGATACGTACAGACAATG 48886 33 100.0 33 ................................. ATTTAAGGCTTCATCGTACCGATGCTGAATTTC 48952 33 100.0 34 ................................. CGTTGCGGTCGTCGCTGCACTGCTCGCCCACGAT 49019 33 100.0 35 ................................. AAAAGTACCTTGAATGCGGTCGGCAATATCCAATG 49087 33 100.0 34 ................................. ATGGGAAGGAAGCTCAGGCAGTAATAACTTTAGC 49154 33 100.0 34 ................................. ATGAGCGCATTTTACCGCTTATTGAAAAACGTAT 49221 33 100.0 35 ................................. GGGAGTATACCATGCTCTTACCGGGGGGTGCTAGT 49289 33 100.0 35 ................................. GGGAGTATACCATGCTCTTACCGGGGGGTGCTAGT 49357 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 56 33 100.0 34 GTCGCATCCTTCACGGGATGCGTGGATTGAAAT # Left flank : GTACAGGCTCTCCTCTTGGCACGGTATATCCGTGGAGATATGGATGGATATCCTGCATTTGTGGGGAGGTGAGTAGATTGCTAGTTCTTGTCACTTATGACGTTAATACCAAGACAACTCAGGGGAGAAAACGTCTTCGGCAGGTAGCACGCTGTTGTGTGGCCCATGGGCAGCGGGTACAGAATTCAGTATTTGAATGTTCACTGGACGAGGTACAGTATGTAATTTTGCGAGACAGACTATCCAGTTTAATTGATGGAGAAAAAGATAGCCTCAGATTTTATAATCTGGGGAATCATTATCAAAGAAAAATTGTGCATGTCGGTGCCAAGCCGACATATGATCCAGGTGAGCCTCTGATTTTATAGCGCGAAGTATAAGCATACACAAAATATAAAGGCTGAAATCCTTGGTTTTATGAACTATAAAAATGACCTAGACAGAGGTTCGCGGAAAATGTAGAAAAAGGTCTGATAAAATCAATGTTATTTAAGAGTACT # Right flank : TTTTCCCCACCGTTCCAAATGCCATACCCATGCCGTCGCATCCTTCGCGGATTCAATGAATTTGCTTTGATTTATCAAAAGATTCACAGTAAAAAACTTTACACCAGTCACTGACTATAGTATAATATTTATGTCGTACGGGTGCTCAGTGTTTCGAAGACTCCGACGTTCACTTAGCGCTTTGCGAATAAATTTATTTTTATGGAGGAAGAAAAAATGTTAAATGTAGAAGAAAAGAAAGAAATTATTGCTAAATTTGGTGCAAACGAAACTGACACGGGTTCTCCGGAAGTACAGATCGCGCTTCTTACGAGCCGTATTATCTATTTGACAGAACATTTGCGCAGCCACAAAAAAGATCATGCATCACGCCGCGGTCTTTTGAAGTTGGTTGGTCAGCGCCGGAATTTGCTCGGGTATTTGCAGAAACACAATCTGGAACGGTACCGTGCGATTCTCGAAAAACTGAACCTGCGTAAATAATATTGCACACTGTGAGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTTCACGGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.30,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //