Array 1 96487-97677 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAILV010000002.1 Roseburia intestinalis strain MSK.17.84 NODE_2_length_199457_cov_214.321, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                         	Insertion/Deletion
==========	======	======	======	====================================	========================================	==================
     96487	    36	 100.0	    36	....................................	AACGCCGGAACAGACGTTAAATTATAGGTTGTATAA    	
     96559	    36	 100.0	    36	....................................	ATCATATGTCACTTGCAAATCTTTTAAGATGTTTCT    	
     96631	    36	 100.0	    37	....................................	CATGATGATCTCGACTGTGCCGGCTGCATGAAGTCCG   	
     96704	    36	 100.0	    37	....................................	GGGAATATGAAAACGAAGAGTATCGAATGATTGCTCT   	
     96777	    36	 100.0	    37	....................................	GAAACACTAATCTGTCCTGTCATAGCTGTTAAAACGC   	
     96850	    36	 100.0	    35	....................................	GACCTTTAAAACCTGTTTTAAAAATATATCTTGAA     	
     96921	    36	 100.0	    33	....................................	ATTGATGCAGAGATCATCAATATCCATACTATC       	
     96990	    36	 100.0	    37	....................................	TGTTCCCATTCGAAAATTCCTCATTTACTTTCTGGTT   	
     97063	    36	 100.0	    37	....................................	TGTTCCCATTCGAAAATTCCTCATTTACTTTCTGGTT   	
     97136	    36	 100.0	    34	....................................	TTAATCTGCAAATTCCGACAAATTTCTCAACTAT      	
     97206	    36	 100.0	    40	....................................	GAGTGTATTCCTCCGGTTTGGTCGTCAACTTAATACTCCG	
     97282	    36	 100.0	    37	....................................	GCGCCGGTGCTATCACACTTCCATGCTTCCATTGTTT   	
     97355	    36	  97.2	    33	.................T..................	TAACCACTAACAACTGCATACTGTGTATCACTT       	
     97424	    36	 100.0	    36	....................................	TGTTACATCGAGTTTGTAAGCTTTGTAGAAGTTTTC    	
     97496	    36	  88.9	    40	.........TA.........T.G.............	TTGTCATTCATTTTCATAGGCTGTGCCTTATCCTGTACAA	
     97572	    36	  86.1	    34	.........TA.........T.G............G	GTTTTTAGTTTCGCTTGTAGTTCGGCTATTTGAG      	
     97642	    36	  88.9	     0	.........TA.........T.G.............	|                                       	
==========	======	======	======	====================================	========================================	==================
        17	    36	  97.7	    36	ATTGAGATAAGAGAACCCCGATAAGGGGACGAGAAC	                                        	       

# Left flank :   TTGACACGACAATCTGCCCGTATCAGATGGAAGATATCATAGAAGCACTGAATATTTTCCAGAATATCTGTAACCGGTATTTTTATGCAAGATTCCACTGGGAGGCAAAGGAAAAAAATACAGTATGGTTAGGTGGAGGATGTGGTTTTCTTTCAAAGACGGTTTTATATCCATTGCTTGGCAGTAATGCAGTAAAAGTTGTGGATAATGTGTTTAAAAATACACTTGGAAAAAATTATGTTGTGCATAAACATACCAAAGACCTGCAGCTTAAACTGGCACCGCATGTCTGTAAGTGTACAAAGTATCAGGGAAAGCTGTATCATATGGGGATGGGGAGGATTGAATTTGAGGAAATATGACAATTTTGCGCCGATAGGCTTAAAATCAGGCTTTGTGGATGTTATACACCAGTTTGATATTGAGGTTTCTCTCATTTGCGGGTTTGCCCCGCAAATGGGGGATAAAAGCCTTGTGTTTTGGGAGGTGTAGGGGACAGG
# Right flank :  CCTTTAGCTGTTTTTGTTATATACTTACACAAGTATAATTGAAAAAATCTTCAGTAAGGGGACAAATAAAAACAAGGGAGGAAACACATGAGTTATCTTTATGTCAGTGAACAGGGTGCGAGTATCGGGATAGAAGCAAACCGTTTTCAGGTAAAGTACAAGGATGGAATGATAAAAAGTATTCCAGCAGAGACGTTAGAGATGATCGAAGTATTTGGCAGTGTCCAGATTACGACACGCTGCCTGACGGAATGTTTAAAACGGGGAGTGAATATCCTGTTTTATTCCACAAGCGGGGCGTATTATGGAAGGCTGATCTCAACTTCCCATGTGAATGTGCAAAGACAGCGTATTCAGGCGGAAATTGGACACAATGAAACATTTAAACTGGAAATGTCAAAAAAAATCATTGATGCAAAGATCCGCAATCAGGTTGTTGTTTTGCGCAGATATGCGCGAGGCAGAGATGAAGATATTCATAGAATGATCATTGAGATGCA

# Questionable array : NO	 Score: 6.15
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTGAGATAAGAGAACCCCGATAAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:52.78%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.60,-6.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-14] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0.27   Confidence: MEDIUM] 

# Array family : NA
//