Array 1 1191751-1192182 **** Predicted by CRISPRDetect 2.4 *** >NZ_JYPG01000012.1 Bacillus cytotoxicus strain CVUAS 2833 contig351, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1191751 36 100.0 30 .................................... CCACCTTTGAAACGCGTCTGGATCAACGAG 1191817 36 100.0 30 .................................... AAAGACCCTACACATAATGAATGGAAATAT 1191883 36 100.0 30 .................................... TACAAAAACAAATGAAATTATCGATAGCCG 1191949 36 100.0 30 .................................... TAAACCACTTATGGAATCTGTAACAATAAC 1192015 36 100.0 30 .................................... TAGCCAAATTTCAATGTCATCGGAAATAAT 1192081 36 100.0 30 .................................... AAAGACGCGATTGATTTTGCTGAGTATAAA 1192147 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 GCCATAATTCCTCTTTAAATCTTGGTATGATATGAT # Left flank : AGTCCGGTAATCGTGGAGGAGAGAGAAGATTCCCCCTCGACCTCTCACACCACCGTACGTACGGTTCCGTATACGGCGGTTCAATTAAGTCTGACGAATCATTGAATATCTATTACTCAAACTTTTAAGACCTAGATATCCCCAGTAGGAATTGTCTAGGCTTCTTTTCGTATGCTGTCTGTTTGGCGATACTCAAAAATTGGAGTTTCTTTCTCCTTACCCTTGATAATTTTTATTGTTTCCATATAACCATTCGGAGCCTTCTTCGAATCCACTTGTCTCGTTCTTTACATATGGACGGCGTGTCGCTTAATGCATTATATCCACACCATCCAATTAGATATTTGTAGATGGTCAACCAAATTTGCCCCACCTTTGTCACCGAAAACTGACCCACCTACTCTTCCTTCGTGACTAATCGTACTTTCATTCTGTAGCTATTTCCGTTAATATTAAAAATATGACAGTACTGAACAAATATTTATTATATGCATTTTTAA # Right flank : TACATGCACCGAAACCTCTTGATATTCCTCAGTTTCAAGGGGTTTCTTTTTTAAAAAAACGAGTTTAAAAATGCTCTTTTGGTTATTTTCGTGCTAAATTTTTTTCATATTACGTCAAAACAAAAAACACTTGCTAAAATTGCAAGTGTTTTTTGTTAGAAAAAGTCCGTTTTATTTGTTCCTAATTTTTCATCAATGGTTTGAACACCAAGTAAAATATCCATACTTTCAAATTGCTTTTCTGTTACTTTTAATGAACGGATTGCTCCATTTACATTTGGAATGTTTTGTCTAAGTCTTCTCAAATGTTTTTGAGCACCTTCTTCTCCATTACAAACTCTTGTGTACACAGAAAATTGCAGCATTGTGTAACCATCTTTTAATAAAAATTTTCGGAAACGGGTGTAGGCTTTTCTTTCAGCTTTTGTCATCACCGGCAAATCAAAGAAAACAAGTATTCTCATAAATTTACTCATACGTATGTTGCCGTAATGCAATCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCATAATTCCTCTTTAAATCTTGGTATGATATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 22592-22039 **** Predicted by CRISPRDetect 2.4 *** >NZ_JYPG01000034.1 Bacillus cytotoxicus strain CVUAS 2833 contig377, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 22591 29 100.0 39 ............................. TTATTTCTTTTTTTGTTGTATCTATTTTTAGCGAATCAA 22523 29 100.0 35 ............................. CCATCTTCATAGTTACCAGTTGTTGTGATAACAAC 22459 29 100.0 37 ............................. GTCAAACAACGCAAATTATTGACTCTATTGCGGGCAA 22393 29 100.0 37 ............................. AATAGATGTATGTAGGTATTGGTTGGAACAGAACGGG 22327 29 100.0 36 ............................. AAACGCTCTAGTGGATGACCAAAAGGTGGCAGAAGA 22262 29 100.0 35 ............................. ATTCGGAACCAATACGACGTTCTGTGCGAACGCTA 22198 29 100.0 36 ............................. GTTATTTTTTGATAGTCTTCAGCACATACCATTCGC 22133 29 100.0 37 ............................. ACAGCAAAAATTATGATTCACAATGCTTCTATGTGGA 22067 29 93.1 0 ....................A...G.... | ========== ====== ====== ====== ============================= ======================================= ================== 9 29 99.2 37 GTTTTATCTGAACGTAGTGGGATATAAAG # Left flank : TGGTGGTAAAAAAATGTTTGTTATAATTACTTATGATATTGGAGAAAAAAGAGTAGGAAAAGCGTGCAAGAAATTAAAACAGTATTTAACTTGGACGCAAAACTCTGTTTTTGAAGGAGAATTATCTAGGACACAACTCTTAAAATGCTTAGCTGAATTAGATCAGATTATAATATCGAGTGAGGATTCTATTTACTTATATGAAGTAAATAATCCACGTAATATAAAGAAAAAGGTATTTGGTATTGAGAAAAGTTACGAAGAGCTATTTCTCTAAACACGATTTTATAATATATTAGGAGTAGTTTTTTTCTTATTAGTGAGAAGTTTGCAGTGCATCGTTTTTTAGCGAGTAAACTGCCAACCTCTTGTCTGTTAAAGGATGGAGCGTATTTTTGAAAATACTTTTGAAACACGACTCAACATCCGCTGCAAGATTTGGAAGTCTTAATGTAATGTGTTCCTTGATTTAAAAGGGATTATAGTGTTTTTTTATAGGG # Right flank : GCAGTTTTCTTATGGTTAAATAACCCATGGAAACAAAATTAGTCGCCATTTATGCTTATCTGAGCGGTATAGAACCTTTTAAAATAGTGGCTAGTTTTTTAGAAAAGAAAGAAGTTATCGTGAACGAAACTAGCTCCTTACCCGTAATTTCGTAGGTTAATTTGGTTACACTGAATAACTATAAAAAACAAACCAAATCAGAGCTACATTACGAAAGGAGCTAGTTTATTATGAAGGATACCACAAAATACGTAGGTTTAGACGTTTCAAAGGAAAAAATTGCTGTTGCTATCGCGGATGAAGGAAGAGAAGAACCTAGATATTTAGGAATGATCCCTCATACACCTGAATCTCTAAGAAAGCTGATAAAAAATTAGGTGCCGTTGAACACCTAAAAGCATGCTATGAGGCTGGTTCAACTGGCTATGGGATTTACCGCTTACTTTTCAGCTTAGGAGTAGATTGCGCAGTGATAGCTCCCTAAAAACCTGGAAATCGTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 32675-31920 **** Predicted by CRISPRDetect 2.4 *** >NZ_JYPG01000034.1 Bacillus cytotoxicus strain CVUAS 2833 contig377, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 32674 29 100.0 37 ............................. AAAGTCGAATCGTTGTGGGTAGACTGTCCACGACTTG 32608 29 100.0 37 ............................. ATTTTTCGCGAGTTTATTTCACACTTTGAGAAAATAA 32542 29 100.0 38 ............................. TTGACACATTACAAAACACCATTCCAATCTCGGATTCA 32475 29 100.0 39 ............................. TCATTGCTGATGAAAATGATACGTGACAGGTTTGTGGTA 32407 29 100.0 37 ............................. AAAGTCGTATCGTGGTTGGTAGACTGTCCACGACTTG 32341 29 100.0 37 ............................. CGTCTTGCAGAAGTTAATCCAAGTAAATAATCAACGG 32275 29 100.0 35 ............................. GCGGTGAACTTGTCCAATTCGGAACCAATGCGACG 32211 29 100.0 37 ............................. AGCGTTACCTCTTTACCAGTTTCACGACCACGCTTTT 32145 29 100.0 36 ............................. TCGGATTTTATAGATTTATTTTTGTTTAATGAGTAC 32080 29 100.0 36 ............................. GTAATTAGCGCAGGCGGAAAAGAATTTGATGAATTA 32015 29 96.6 36 ............................T CCAATGTATTCAATGGTTTTTGGACATTGTTAGAAA 31950 28 93.1 0 ....................-.......A | AGA [31924] ========== ====== ====== ====== ============================= ======================================= ================== 12 29 99.1 37 GTTTTATCTGAACGTAGTGGGATATAAAG # Left flank : CGTTCTTGTGAAAAAGGTAAGAAGAGGAGACGAAGAAGTCGTTATTATGATTCGTTGGGAATCTGAAGAAGCATGGAAAAATTGGGAGACAAGCGAAGAACATTTGGCTGGTCATCGTGCAAATCGCGGAAAACCAAAGCCAGAACATATTTTAAATGCTGAACATGCTGTTTATTATGTGAAAGCAACGAAATCGGCTTATCAGCAATCATAATGTGGATGAAAAGGGGGCGATTTAGCCCTTTTTTTAATGATTAAAGAATTCTTTTCTTAAATGTAGTTTTGTATTATATTAGAAAATAAGAGTGTACCTATACCAATACTCATTTTGCAGCATATCAATTTTTGAAAGAAAGGAGTCAAAACCCTTATGTTTCAAGGGATAGACTTTATTTTTGAAAATGCATATGAAACAAAACTAACAGTGTGCTGCAAAACTTTCAGTGTATTATATAATAAATGTATTGATTTTAAAGAGAATTATGGTGATTTTTTATAGG # Right flank : AACTTCAGATGATAATAGTCCTTCTAGGGCATAGCTATCAACTTTAGAGAAGTGCTTCCCCTAAAAAAAGTATCGGGACACTTTTTTGTAATCTTTGAATGCAATCCTGGATTTTGGGTATATTCAAATAGAACTTCCTATGATATATATTTTATGGCGCTATTTGAAGCCGATTCGCTGATTTTTCTATGTTTTGTTTACTGATAGCTTGAAAGAGGTTGCTAAGTACAAAAAAGTTGCGGTGTATATTTTTTTGATAGATTTGCACCATATAAGCATATTTCAACTTACTCATTTTTTCCTTGTGTCTCTCATAAAGGTCTTTGTAGTTGATAGGTGTAACGCTTGCAAATAAACATAAACGCAAGGAGTATAAATTTATTTTAAATAGAAGTTCTATTTGCTGTCGTAATGAATAAAAAGCATACACTTCTGTGAGAGGATACTGAAAAATGGTGGTTTTGAAAAATAACACGCATTTTATCGAAATGTTAAGGATA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //