Array 1 299324-298335 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBVJ01000010.1 Enterobacter bugandensis strain IF2SW-B5 16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 299323 28 100.0 32 ............................ AGCATTGCCGGGACTCTCAGCGTCGAATCCAG 299263 28 100.0 32 ............................ TAAGCCCTGGAAATCAATCTGTCCTCCTGTGT 299203 28 100.0 32 ............................ TTTTTGCTCATTGGTTTTTCAGCCTCAGTCTG 299143 28 100.0 32 ............................ GTGGGGCTCGAAGCTCTGGCTGCTCAGCCGTG 299083 28 100.0 32 ............................ AGCCTGATGGCAGCGCCGCAGCATGAAGTGAT 299023 28 100.0 32 ............................ ATATTGATACCATCCTCTGTGGTGGCGCTATT 298963 28 100.0 32 ............................ AAGAGGCCAGCTTCGTGAATCTGGCTTACGTA 298903 28 100.0 32 ............................ ATAACCCGAATGTGTGAGCGGAGCCCCTTTAC 298843 28 100.0 32 ............................ ACGGAGTACAGGTCAGCAACGTCAGCTGACGG 298783 28 96.4 32 ........T................... ATATTCTGCTAAATCAACCCCGGCTCAAACGT 298723 28 100.0 32 ............................ ATGAAGTCATTTACACACATTCAGCAGAAGGT 298663 28 100.0 32 ............................ TACGCGATTCATCGGGGTCAGGGAAATGACAA 298603 28 100.0 32 ............................ GAAGGGCGTAATACTCCAGGCCAAAACGATAG 298543 28 96.4 33 .G.......................... AGAGATTGAACAGCTGAGTGACAAGCGTCGATT 298482 28 100.0 32 ............................ TACATCACAGGACAATCATCAAACTCACCAGA 298422 28 89.3 31 ...........C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [298397] 298362 28 75.0 0 ........T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 17 28 97.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGGCTACGCGTTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCATTAATCCCTGTAACGCGTAAAATGTCCGCTTTCGACATGGCCGTCCATTCATGAATATTGTCGAGCACGCTGACGGGCAATCCCTGGTTGAGAAATTCTATCAGCCGCATACCTCTGTTCGCGGGTAAACCGGCGTAGCGCCAAAGTGCGTTATCAGCAGGTTTCTTGGCGGGGATCCAGGTTCTCATGTTACCTCCTGATTAATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCAGATGGAGTGGAATGGGGATTTTTTGTGCTGGGTGGTTTGTGAGAAGAACGATGTTTTGACCCTGATTTTTAACGGTTTTGTAATCCATTGATTTTAAATGAGTATTTTTGGTGGGTAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : CTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACAGCACCACTAAAAAATAAGGCCGGGATTAACCCGACCTTTTATATATTCATCTGCCATTACAGGCGAAAAAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTTCCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACAGG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 309805-308875 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBVJ01000010.1 Enterobacter bugandensis strain IF2SW-B5 16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 309804 28 100.0 32 ............................ CTTAATTGTATAGGGGGAGCTATGAAAACGTT 309744 28 100.0 32 ............................ TATAACTATCAATATACAAAATAAATGGTGCG 309684 28 100.0 32 ............................ TAAAAAGATAAGAGCAATGTTCGTCGATGAGG 309624 28 100.0 32 ............................ AGATACAACAATTATTTTAACAGATGATGGTA 309564 28 100.0 32 ............................ AGGCTCAATGGTTCCCTGCATGCTATCACCAC 309504 28 100.0 32 ............................ GTCAGACGCTCAATCGCAAGCTGCATTTTTGA 309444 28 96.4 32 A........................... GAAGTATGGGTCACGTTTAACCCGTATTTCGC 309384 28 100.0 32 ............................ TCTCGCACAAGGTCATTGAGTGGAGAGTGACC 309324 28 100.0 32 ............................ CTCAAAATAAAAACCCTGGGCTAAATGCTCCC 309264 28 100.0 33 ............................ CGCAGCGAAGCGAGGACTCAAAAAGCATTACGG 309203 28 100.0 33 ............................ CAGCTCGCGCCTTCATGCGCTTACGCGCATTCC 309142 28 100.0 32 ............................ AAAGCGACGCACCAAAACCGGCAGTAGTCACC 309082 28 100.0 32 ............................ TGATCTGGTGTGTGCTGATAGTGTGTTTCACA 309022 28 92.9 32 ............G.T............. GCCAGGAATGCGAGATTGCGGATATCAGTTGG 308962 28 92.9 32 A...........G............... AGGACAGGCCCATATCACAGGATTTCTCTGTT 308902 28 92.9 0 A......................T.... | ========== ====== ====== ====== ============================ ================================= ================== 16 28 98.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCCCAAACGCAGCCCGTATGCCGTTGCCTCGGGGCTTATCTGGAAGAAGTTAAAACCGGCCTCACGGAATCCATGCGTGATTTTCAAGTGGTGGAATTTGAGGACGAAGCGGAACAACCGCGACAAAAAGAGTGGCTGCTGGAAGATACCGAAACGAAATGTGACTACTGCCGGGCGTTGAATCATGTGCTGCTGGTGTCGCATTTTGACCGCGACATGCTGCCGCATCTTACAGGACTGCTCCATGACATTACGCATTCTATGGCCGCAGATGTTGTTGCGCCTCAACGTGAAGAAACGGTAATTCACATTATTTCCTAAGTGCAATCCAGGGCGTCGGGGGCGTTATTCTGACGCCATTGGTTTATACCCTTTTTTCTGATGCTTACGTAACATATTGATTTATATAGTGCGGATTTACGTTCCAGAAAAAAGGGTTTTAGGCGTAAAAGTTGATTATTTTATTTGCTAACAATAAGATGGCGTTGTTTCCTTTCA # Right flank : GCCCCTTTGGGCTTTAATGCCGTGGAAATGGCGTTACTATCTCACAGACAGTACAAGTAAACCCATCCCTCACAAATATTCACCTTGTCTATTTAAAAACGAAATACCATCATCCACACGCTATCCATTTTCAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCCGTGTATATATTATTTTAAAAATAATACTTTAAAAAAATAATGTGTTTTGTTTAGTTATCACAGAAATTTCCATTCATTTGATATATATCACATTTGTATTTCTCTCATCTCCGATAACATACCCGCATTCAATACCTTGAAATTAAAGCCGTTGCTATGCCTGCAAACAGCGTTACCCCAACAGATTTAAAAACCATCCTGCATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGCCGCATCCAGGTAAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGAAAAGAGTCTTTTTACTGGAATATTCCCATCGCGAATACC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //