Array 1 6864-7927 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCK01000024.1 Parasutterella excrementihominis strain BIOML-A3 scaffold24_size34444, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 6864 29 100.0 32 ............................. AAGGACGCTAAGCCTCAAACAAAACTCGACGC 6925 29 100.0 32 ............................. CCAAATCGGGCGGCTGATACACAGCTTGAAAT 6986 29 100.0 32 ............................. ACAAAGAGCATTTTGGGATAGTGCTCAGGCAT 7047 29 100.0 32 ............................. TCCATTACGGCAACCGCTGCTATCGGCGCCGG 7108 29 100.0 32 ............................. TAAACATCGAGGCTAGATTCTCCTGGAATCTG 7169 29 100.0 32 ............................. TCGATTTGGCTCCACTTGGCCTCTCTTGCCGT 7230 29 100.0 32 ............................. CTGAGACGGTTGACGGGTCAAAATCAACTCTA 7291 29 100.0 32 ............................. CGAGAACGAGGTTTTAAATGGTGCTCAATGAG 7352 29 100.0 33 ............................. CTCAATGAACAAAAAAATGAAATGAATTTCGGT 7414 29 100.0 32 ............................. ATCAACGGATCATTGATGAGGCCATCCGGAAA 7475 29 100.0 32 ............................. CTAACGATTTTGTCAGAAAATGAGCCTACTGC 7536 29 100.0 32 ............................. GAAAGGTACAACGAGATCTGCACATATCGAGA 7597 29 100.0 32 ............................. GCACAAGCCCGCACGAATATCGGAGCCGCCAA 7658 29 96.6 32 .................T........... GTCAGCAACGTAACCTAGACGATCTAAATCCT 7719 29 96.6 32 ............C................ TCCAACTGGACAATGGCCCACGACGGCTTAGA 7780 27 93.1 32 ...........--................ ACTGATTGATGTTGAAAATCCAACAGCTATGC 7839 29 79.3 33 ........T...C.....A..GC.G.... ATGGATTGGGTCATCGATCATCTCGATGTCAAA 7901 27 86.2 0 .........A.--...........G.... | ========== ====== ====== ====== ============================= ================================= ================== 18 29 97.3 32 GAGTTCCCCGCGTAAGCGGGGATGAACCG # Left flank : AGAAGAGTTTTTTCTCGTGTCTCACTGGTTCCTGGTTCAAGTCCAGTTGAGGCCACCACCTTCTTAATTCTATTTATGACAACGCCTCAGTCTTTTGAGAAGGAAAGGTTAAAAACGAATCATTAGAAGTTCTGATAGAATTGCACTTCTGCACAATGGTGATCTCTTCATCATTAGGCCCCATAGCTCAGTTGGTTAGAGCAGTCGACTCATAATCGATTGGTCACTGGTTCAAGTCCAGTTGGGGCCACCACCTCATCTATTAAATCCAATTAATTGAAGTCAGGATGGAACAGATTCTGAACCCCGGCCTTCTGTAAACGTTATTATCCTCTTTCAGGTCAGCAGAGCATTTGTCTTTGAAATTAAATGGCTCTGAAATTTTCTAATCCAGGGAACTGTTCTTGAAATGATTCAAAACAGTCTCAGGGTTCTTTGCATATTTTCCCGATAGGAAATCTTTGCTAGAGTTAGTAAGGTGCTCTATGCCTTGTTTAAGT # Right flank : GTGGATTCAGCAATAATTCAAGAAGACCTCCGCTTCTTTCCTCATTATGTTATTGGAGGGGTTGATCGAAAAAACAATTTCTTCTTTCCCTTTACTGCTGAGTTGTACACGTACATGGAAGTGAACCGTAATGATGGATTTTTCAACGGTTTAATTTCAAGTACTAGATGAACCGTAGTCACTTACTGTCTTAGATATTGTTGTTGGAAATCCTTCTGCGAAAAGAGTCGGAATTGATAGAAACTATCTTTCTATTCGTATTAATTCACTATCATCTCCAAAGCCTTTTAGGCTTCTCTTTCTAATTCGAAAAAGAAGGTTTTGCTCAAGAATTTAGTGCGCTAAAAGTATTAATAAAATCACAATATTGATTAAAGAACATACCTTCTATCAGCCAGATGGCTTTGAAGGATGAAAGCTCATCACCCATTGTGCCTATTCATGGTCGAGCACAATAAGCGCAAGTTCTAGAGTTGTAGAATGTTTCTTTTGGGATTTTT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGTAAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4977-5554 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCK01000051.1 Parasutterella excrementihominis strain BIOML-A3 scaffold51_size16434, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4977 29 100.0 32 ............................. TATTTGCTTCCAGCGGGGACATTGGGCGTCCT 5038 29 100.0 32 ............................. ATCCTTATCCTTTTGTTTTAGTCCGGGCAAAT 5099 29 100.0 32 ............................. ACCGAGCCGATGATTAACCTCATCATCTCAGT 5160 29 100.0 32 ............................. GAAGATTGCATTAAACATAATGTCGAGAAGTA 5221 29 100.0 32 ............................. ATCACCACCATGAAAGGTAATCCCCTGCTAGT 5282 29 100.0 32 ............................. GTATCGTTGCCGAGACCGGCGCGTTTGAACAC 5343 29 100.0 32 ............................. ATTGAACCGGTCATTTTGTCCCGAGTCGATCC 5404 29 100.0 32 ............................. GCAAACATGGACGCACCTGAGATTGCACGTCT 5465 29 100.0 32 ............................. CGTAATGTATATACGTTCAACTGTTTATTCAG 5526 29 86.2 0 ............C...........GTT.. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 98.6 32 GAGTTCCCCGCGTAAGCGGGGATGAACCG # Left flank : GATTCGAGGATCCGAAATTTTTCACTCGTGAGTACAAAGACTATTTTGGTTTGTCGCCTCGAGAAAATATAAAAAAGATAAGAGCAGAGGAGGGCATCAATTAATTTTTTAGTGGAAAAATCTAGCAGATTTCGAAGAAAGAATTTCTTGGCAGCTATGGGATTGGTTGGTGTGACGCAAATAGGTCTCAGAAAATTTGTGAGCATCCCAACTTTAAATAATTCTGATAGAATCCCTCCTTCCAACGGAAGGATGGCAGAGTGGTCGAATGCGCCGGACTCGAAATCCGGTATACGGTTATACCGTATCGAGGGTTCAAATCCCTCTCCTTCCGCCATTTTTCTACTTAATGCCCCGTTAACACATTTTCTCCTCTCTACGCAGGCTTCGGTATTTCAGAGAAAACTGATAGTATCTTTAGTAGCTTTGTTCTTGTTTAGAAATGTTCTTTAAAAGCTTAGCGGTAAGCCGATTAGTGTAATGTTGTAACCATTTTAAGT # Right flank : GGACTTACCCTGCATGAAGGTAATGCTGGAGAGTTCTCCGCTCGAGGAAAATGATTGTCAGAAGCTTAGAAATTACCTAGCTTTTCCTGTTCTGAAGAGAGGGTAAGGTCTTAGATTTTTTCCTTTTTAATTTGAAGCGATTCAATTGAACTTTTCAAAAGGTAAGGTTTCCTTGTGTACATTCAATTAGCAAACTAAGTAATTCTACTTTGGTTTTGGTTGGATCGCTTCGTTGTAAAATCTCAAAATAAATCAAATTCAACCCCTTGACAGCGTCCTTTGTATATATTGGAAAGATTGTATTGTTTCCTCGAGGGTTCGAGCCATGGAAATGGACCTAACAACTAGAATTATCGCCATTGTTGTTCTCATTCTTTTCAGCGGTTATTTCTCTATGGCAGAGATTTCGCTAGCCGCATCTCCTAAAGTTAAATTGCATCAAGCATTAGATGCGGGGGATAAACGAGCACAAAAAGTGCTGGATCTTCAAGTTAAACCAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGTAAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 24523-23868 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCK01000026.1 Parasutterella excrementihominis strain BIOML-A3 scaffold26_size32241, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================================================================= ================== 24522 36 100.0 35 .................................... GGAAGAACCTCATCCACAAAAAACGGGATGAGATA 24451 36 100.0 35 .................................... AAACTCCCCGGGCAGGTCGCTCGAAACGGCGGTTA 24380 36 100.0 35 .................................... CGCTAAATACACGCTCAACTCTGCTCAAATGCTGT 24309 36 97.2 36 ................T................... ACGAGATCGACCGAGCAACCGAGAACGAAGGAGTAA 24237 36 100.0 35 .................................... CATAGCACTCGAACGGGAACCCTTCCGTATGTGTG 24166 36 100.0 34 .................................... TCAGGGAGGCATACTTGATCAGAGCATCCGAGAC 24096 36 100.0 34 .................................... TACTCCCAACTGCTTACAGACAAGGCGCTCATGT 24026 36 100.0 87 .................................... GATACATTGAAGTTTCTAAAAGATCCGCCTGTCACGTTTCAATAACTATTGAAACTCCAGTCCTCGGCGTTGAACTCGAACTCTAAG 23903 36 83.3 0 .T..................C..GG.T.....G... | ========== ====== ====== ====== ==================================== ======================================================================================= ================== 9 36 97.8 42 GCTTCAATACTACATTCTTCTAACAACTACTGAAAC # Left flank : GAGAAATTCCAAAGAGAGGTAAAGCAAGGGTTCATTCTTTACGGCAAGAAAGGCAAGAGCCTGCGCGTTGAATTCACGGAAGAAAGAAAAAAGAAAGTGATAGAAATAGCTCAAAAGATTATTAGTAGTTTCGAAACAGGCCTTCTTCCAGACTCCCCCGCTACTTCAGCACAATGCGGGCAATGCGAATTTTTGAATTTTTGCGGGGACCGCTTCTAGCAACACAAAAAGCCTCCTCGGAGGCTCTTCGTTAATCCGGATAAGGTCAAAGACCTCAGTAGCCGGATCTAATATTTAATCAAATTGATTTCAGCTCGCCCGAAGGCGACTTCGTTGTTAAAAGAATGTAATTAAATATTGCCAGAAATATTCTAAATAGTCAAGCAATCACCCCAATTTTTCGAAAATAACGGCACTTTTCGTGCAGGTCGACCATTTTCGAAAAACAGCTCCGAAATCAACCTATCAAAATCCTTTGTTTTCAAATAATTGAGTCCGAG # Right flank : TGTCTAGTGGCGTAGCCAGAATATTTTTCTAAAAAGTCTCCGAATCACATTCTTCTAACTGTCGCTGAGACCAAATATTCGGCGTCCAAGAGCGAGACAAACTTTCGTTTACACCCTACTCCACTTCGGTACAATCATCCACGTTGTAAACAAATGCCACTCTCGTCAAAAAGATAGTTGCCTAATCTTTGTCAGTTTGCGAAAAACTCGCTCTCGCCTTTCTGGAATAGTGGATGAGAAACGGATGCTTCGAGGGAACGGCAAGAAAAGCAACAGCGCCAAGAATCAATGCCCCGCCAATACACTCCCAAGAATTAACGCTCACCCCAAGAAATATCATGCTCAGTAGAGTTGCAGCTACTGGGTCGAAGGTCTCCATCATGCCGGCAATATCTGCCGGGATAATTTCGGCAGCCGCTTGAAAAAGCCAAAACGCCGCAATCGTTCCGAAAAGCACAATAAACGCATAAGCCAAAATTGAGTAGACGGTCCAGTCCAAA # Questionable array : NO Score: 2.59 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.55, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATACTACATTCTTCTAACAACTACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 31494-31884 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCK01000026.1 Parasutterella excrementihominis strain BIOML-A3 scaffold26_size32241, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 31494 36 80.6 34 TG.G.TTCA........................... CGTTTTGTCTGCCGCATAGTTTGTGACATCGAAG 31564 36 100.0 38 .................................... GTTACTGGTCATCTTTTCTTCATCGTCATCATCGAATG 31638 36 100.0 34 .................................... GTGGCGACTATGCGTCAAGAATCAGCCGCGTTTT 31708 36 100.0 34 .................................... CCCACGGAAGCCGCGCAGATGACGCCCAAGGAAG 31778 36 100.0 35 .................................... CCCAACCGGAAAGGCCACAAGTCGTCTTCTTGAAT 31849 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 6 36 96.8 35 GTTTCAGTTGTTATTGAAAGAATGTACGATTGAAGC # Left flank : TATAGGTTGAATTAGAAAGTTTGAATATATTTATTTCAGTGAGTCCACAAATACGAGTCCATTTTTCAAAAGAATGTGGGTCGAAACAGTTTGAATGCTTTGTAGCTGCATTTCTCGACTTCTGTTGAAAGAATACGCAATTAAAGAGGAAACTATTTTCCTGACTTTGACTATCTGCTAAAAATTAGGCTGAGTTTGGTCAGGGGCGGAATTTTCCCTTTTTTGGAATGACGGAACGATCCTCTCTTTGAACTGAGATTGGATCGAAAGAGTAAGAAGGAAAGAGGCGTAACAAAGGGAGAGGTGACTTATTGTGCGATTTTTTAAGGCATTGATAGACGGGTTGCTTAATGGCTTAGCCACTATTTTCTCGGTTGTTATGTTTTTATTGCTTCTGCTTTTAATTTCTTTTAGTTTCTACTTCGTGTTTTTGACTTGATGTCTTCGTTTACATGCAAGGGTGCTTCGACGCCCTTTTTGTGTGGATTCCGGCAATAGTA # Right flank : TCCGAAACCAACTGATTGAAAATAAACGATTTTTGACAGTTGGTTTCTGGTCTGTTTTTCGAAAATGGTCGATCTGCACAAAAAGTGCCATTATTTTCGAAAATTTGGGGTGATTGCTTGACTGTTTTTGATAGTTGTGGCAATATCTAGTTACATTCTTTCAACAACGAAATCGCCTTAGGGCGAGCTGAAATCAATTTGATTAAATATTAGATCCGGCTACTGAGGCCTCTTGGCCTTATCCGGATTAACAAGGAGCCTCTATTCGAGGCTTTTTGTGTGTGCGCTCGGCATGAGCGAACTCTACAGGGTGAAAGTCCCGAAGTGCGGGCGGTGGCGCCAAGCACATAGCCAAAG # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTTGTTATTGAAAGAATGTACGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : NA //