Array 1 99278-100830 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJGUR010000001.1 Carnobacterium maltaromaticum strain 10040100629 isolate 10040100629, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 99278 36 100.0 30 .................................... AAAAACACCTACAGCCTCCGTCCGGGAACC 99344 36 100.0 29 .................................... GAAACTACCTTCCATTAAATTACCACATT 99409 36 100.0 30 .................................... CTATGTTCGTGGTCTTATTACAGCGTTTAT 99475 36 100.0 30 .................................... AAGGCACGCTTGTTCCAATGAAAGTGCCTG 99541 36 100.0 30 .................................... TGTAAGATACAATTCAAATTCATATATTCG 99607 36 100.0 30 .................................... AATTAAATGATGGACTAATACAGCAGGAAC 99673 36 100.0 30 .................................... CTAAGCGATTCTAACCAATCATAATATAAG 99739 36 100.0 30 .................................... TATTATTATCTTTTATTTTTTTCTTTTTCG 99805 36 100.0 30 .................................... TAGAAACAGCTTACACGCTTGACCCTAATA 99871 36 100.0 30 .................................... AAAGTTAGTTGTGTTTGACCCTTCATCATA 99937 36 100.0 30 .................................... TTTACGCAATTTGTTTATGTTAATATATTT 100003 36 100.0 30 .................................... AGGGTCTGAAAAACTATTGAAGTGAATAGA 100069 36 100.0 30 .................................... AGATTTTACAACAGTGAAATAGGTGAGGAG 100135 36 100.0 30 .................................... TAATTGTTGGATACGTGATTCTAATTCTCT 100201 36 100.0 30 .................................... AAAGGTTTAATAGTGATGCGGATGAAGTAA 100267 36 100.0 30 .................................... GACTGTAACAGATGATGAAGCAGTTGTATT 100333 36 100.0 30 .................................... GACTGTAACAGATGATGAAGCAGTTGTATT 100399 36 100.0 30 .................................... GGACAACGAAATAGTAAAGAGAAATTACAA 100465 36 100.0 30 .................................... CCGATTTTTGCCGCTGTAGCCGCAGGGTCG 100531 36 100.0 30 .................................... ACTGCAAGGCGTAACGGTACGGGACAAGTT 100597 36 100.0 30 .................................... TTGTAGTGTTGTTTATTGTGAGTGTTCTGT 100663 36 100.0 30 .................................... CTGAAAGACCAATTATGTGAAGGGAAAGCA 100729 36 97.2 30 ...........................A........ ATAATTATTGAATTTTTCTAACATTGTATT 100795 36 88.9 0 ...................C...G.A.A........ | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.4 30 CTAATATTATAGCTGATTTTGTAAGGACACTATAGC # Left flank : ATCAAGAAATTCATTCTTTAACAAGCGCTCTTCGTAAAACTACTGCATCATTCTCAACTTGTTGTAAAAATAATAGTGCATCTTGGATTAAGTTACCAGAATTAATTCCATTAAGTATACACGAGTATGACTAGATTTATGAGAATGTTGGTGATGTTTGATTTACCAGTTGGAACAAAAGCAGAACGAAGAGCTGCAACGAAATTTAGAAACTATTTGTTAAATGAAGGCTATGTTATGATGCAATTTTCTGTTTATTATCGCATTTGTAATGGATATGATATGATGCGTAAATATGAAAGGAAATTAGAAAAACATGTCCCAGGTAAAGGATCGGTAAGAATGATTCCAATTACTGAGAAGCAATTTTCGACTATGCGTCTATTGGTTGGTGATGAACTACCAACTGAAAAGAAGCTTGGAGCAGATAGTTTGACCATATTTTAGCCAAAGAAAAGAACCTATCAGAGCTTGGTGCTCATAGGTTCTTTTCTCTACGT # Right flank : CTAGGAATTTTTAACCAATAGAATTTATTATAGTAAAAAAAACAAAACTATTCTAGTCATTTATAAAACAATTTTCAATTTCTATTCTTTTTTACAAGTTATGGGGATAATCTGCGGATAGTTTGTTATAATATATAAGAGATAATGAAAGAGAAAAGGGGTATTTTGAATGGTTCAAACCTACCGAACTGCCTTAATCAACCGACCGTTTATGTATATTGAAAGTAAACGGATTGCAGAATTAATTTTACAGAAGCTGTCCTTTACTGAAATAGAAAAAAAAGTATTGATAGATGATCTTTTACAACTACCGTCATTAGATAGACGAAAAACAATATTAAGAGAAATTATGCTAAGACTATCTTACTTAGATGATAATCTATTAACGTACTTTACTCATTCAGATGGTGAGACAGCAAAATTACTTTTAGCATACGGTTTATTACAAGCAGATGATTTGTTTTTTGAATTTATGCGGGAGATTTATTTGGAAAAGATTT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTAATATTATAGCTGATTTTGTAAGGACACTATAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 112417-115419 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJGUR010000001.1 Carnobacterium maltaromaticum strain 10040100629 isolate 10040100629, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 112417 36 100.0 30 .................................... GCTAATTTTGATTTAGCTTGTACAACCATG 112483 36 100.0 30 .................................... TTGTTGTTTGAAATCCATTTCCTTATTCCT 112549 36 100.0 30 .................................... GTAAACTGTACTTCTAATAATTTTAATTCG 112615 36 100.0 29 .................................... TTTAGAAAATGATGATGGCGAACAAGACG 112680 36 100.0 30 .................................... AGATTTAAAAGCCTTGGCAGAAGCCCAATT 112746 36 100.0 30 .................................... TAATTCAGCTTTAACTACAGCGTCACTTTC 112812 36 100.0 30 .................................... ATAAGTTGTCAGGCATAGGAGATAAATTTT 112878 36 100.0 30 .................................... AAGCATAGTTATAACTAAATCTGCTCCGCT 112944 36 100.0 30 .................................... CCCAATTTCTAAATATTTTTTTATTCTTTC 113010 36 100.0 30 .................................... AATAGAATTAACTTTAGAATTTGTAGAATC 113076 36 100.0 30 .................................... CTGTTCCAGGATTAAGGTGTTTGAGGAAAT 113142 36 100.0 30 .................................... TTTAATCACCTCCTTCTAAATCTAAAATAT 113208 36 100.0 30 .................................... TGCTATAAACTTTTAGATTGGCAAGCGCAA 113274 36 100.0 30 .................................... TACGGCGTTTAGCTCAAATAGCCCCGAATT 113340 36 100.0 30 .................................... GGAAAATTATGAGTATGACCAACGAATCCA 113406 36 100.0 30 .................................... TTTTACCGCCGTTGTAGCTGATTTGATTCG 113472 36 100.0 30 .................................... GAAATCTTCATGTCAGGATTCAATCGATCT 113538 36 100.0 30 .................................... CTCGCTGATTAAAGCAGTTAATAAATCTAA 113604 36 100.0 30 .................................... AGGCGCAGGAACGGTTGTTCAATCTTATAT 113670 36 100.0 30 .................................... TTGATTCAATCGCTTGTGTTTCAGTTGTGA 113736 36 100.0 30 .................................... AACTAGCATATTTTCGTTTTGAGTATTTTC 113802 36 100.0 30 .................................... TAATTATATAGCTTACTGATTGAGTTCTGT 113868 36 100.0 29 .................................... CCGTGTTATACTAGTAAGCGTAGTAACGG 113933 36 100.0 30 .................................... AAGCTTTATAGAGAAGGAGAGTGAGGCGTA 113999 36 97.2 30 ...........T........................ CCCCCTCGATAAACAAGAACCAACCATCAA 114065 36 100.0 30 .................................... TGTCTTTCATAGATGGATGGTATAGCGTAG 114131 36 100.0 30 .................................... CGGCCGAAGTCTCCGGTATCAATTAACGCT 114197 36 100.0 30 .................................... CCCCCTCGATAAACAAGAACCAACCATCAA 114263 36 100.0 30 .................................... TGTCTTTCATAGATGGATGGTATAGCGTAG 114329 36 100.0 30 .................................... GTTGATTTACGCATTAGTACCAATCCGATA 114395 36 100.0 30 .................................... TAGAAGTTACTACCCCCATTATAAGCACGT 114461 36 100.0 30 .................................... ATTGATGAGCGTTAAGACTGCCGCTGTTGG 114527 36 100.0 30 .................................... TACAAGGGTATGAATATCTTTGAAATTCGC 114593 36 100.0 30 .................................... CTAGATTTGCAAAAGAAATCTGTGTTGCTA 114659 36 100.0 30 .................................... AAAAGGAGGTCGTGGTTCAGCTAAATCAAC 114725 36 100.0 30 .................................... AAAAGGAGGTCGTGGTTCAGCTAAATCAAC 114791 36 100.0 30 .................................... TATTTTTAGGCTATACATTTGTAATTAAGC 114857 36 100.0 30 .................................... TCCAAGTGCCTCTATTATATACATTAATTC 114923 36 100.0 30 .................................... TGATAGTTCACCATTGAATAATGCTTCTTT 114989 36 100.0 30 .................................... TATTAAAGAGATATATCCAAATGATAAACT 115055 36 100.0 30 .................................... CATCTTAGGATAGTTACGTTTTAACATAAG 115121 36 100.0 30 .................................... CGATTACACCGAAGACAGCGACGACAGTAA 115187 36 100.0 30 .................................... CACCTATACCAGATTGAACCATGCCAATAT 115253 36 100.0 30 .................................... AGACCGTATATATTTATGCAGTTCAAATAT 115319 36 100.0 29 .................................... AACTTGAGTATTTCCGTATGATTTTTCTA 115384 36 94.4 0 ...............G........A........... | ========== ====== ====== ====== ==================================== ============================== ================== 46 36 99.8 30 CCAATATTATAGCTGATTTTGTAAGGAAACTATAGC # Left flank : TTAGTATTAATGGCAGATTCAAATAGCGAAGATGCAAAAGAACGAGTCATGCATGAAAAGCTAATTTTATTTAGTAAAGAATATGATTTATCGTCAGACTATTATTTAGTTATGGTAAATGAAATGGACCCAGAAGAAATTGATAAAAAACGGTTTAGCATTGATTTACCGAAAGAGTTCATTATGTAAAATTTGATGATTAAAAAATACTTGCTTCTTTATTCAGTTAAGGTTATAATTAATTTAGAAATCATAGCTGATTTTGTAAGGAAATTATAGTAAGGGGTTCGCTTAGGCGTTCGCCCGTAAAGCTCTAATCCCCACTTTCTTTTGAGAGTGGGGATTATCTTTTTGTCTAGAAAATGACAAAAGACCAATTTAGAGGATATTATGGTTGTTTTACGACATTGATTTTTGTTTTCATCCTATTTCTTGACCATATTTTAGCCAACGAAAAAAGCCTACTAGACTATGGTACTAATAGGTTTTTTCCGTTACCT # Right flank : CGAATATGCTCTCATCACTTCTATTCTTATTCAATACTATAACTAATTTTGTAATAAAATAGTTCCAAATTAAATAATTAGCGGGTTGAGACATATATGCCAATCGTAACAGTTTAGGATAAAACATACAAATTATATTTAAGCTTGGAAAGATTAGTTGGGTCAAGTCCATGGAAACACTAAAAACGACTAAGTACTTTCCAGTATTCTGAAAAGTACTTAGCCGTTTTATTAACTCACATCGCCAGTATTAATCACAGGCTGAGTGCCTTTATCGGTAATAATCGATACTAATAAATTATTCACCAATTGCAAGCGGCGTTCGTCATCTAATTTCAGGACGCCTTCTTCTTCTAATTGAGCAATGGCCAATTGAGTCATACCAACGGCACCTTCAACAATAATTTGGCGAGCACTTAAAATTGCTTTTGCTTGTTGACGTTGCAACATCGCACTGGCAATTTCAGTTGAATAAGCCAAATGGGTTAAGCGAGCCTCAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATATTATAGCTGATTTTGTAAGGAAACTATAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //