Array 1 472567-473144 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABWVI010000004.1 Klebsiella pneumoniae strain ZKP149 isolate ZKP149, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 472567 28 96.4 33 .............A.............. CTCCTCTTCTCCAAGCCCGCAGCGCTTTAATGC 472628 28 96.4 33 .............A.............. CGGCTCTTTTTTATCTCCTTCATCCTTCGCTAT 472689 28 100.0 33 ............................ TGATCGGCGTGCCGTTTGTTGGACCCGAAATAG 472750 28 100.0 33 ............................ CGTCATCAGCGCCTTGTTCCAGCGGCGACCACC 472811 28 100.0 33 ............................ TATCGTGCAGAGTCACAACCTGACGGGATTATC 472872 28 100.0 33 ............................ TCGTGCATGGTGAGGATTCTACAGTCGCACCAT 472933 28 100.0 33 ............................ TACCTCCCGGCGTCCGCGCCAGGGCGATCACGT 472994 28 100.0 33 ............................ CCTGCAGCTGGCCGTCGAGCTGACGGATGCCGG C [473003] 473056 28 92.9 33 ............T.T............. TTCATCACGTGTGAGCGGATTTGGCTCTATCCT 473117 28 89.3 0 ............T......A.......T | ========== ====== ====== ====== ============================ ================================= ================== 10 28 97.5 33 GTCTTCCCCACACGCGTGGGGGTGTTTC # Left flank : TTAGCGTTGGCGAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGACTCGACGGCGCAGCGCAGGATAACAGCCTCCAGCTACCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACTTCGCGAAGCCACGGAAGGCAAGCGCCAGGATGACGCGCTACGTTCTGGGGATGACAAAAGCGTTTTACCCCCGGCTGCGGGCCGGGCAGGCCAGTAGGGTAGACCGGTCCAGGTCAGCAGCAAATCGACGGTGGTTATATGGTGACATACTTTTTCGTTTGATGAATGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAATTGTTGTAAATCTGGCGTTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : TCGCCTTTCAAGTGACGACAAGTCACGTCTGTGCGCATTTCTCAGATGAAAGGGGATTCCTGACGTAGAGGCATCAATGCCGTGACATAGTTATCCTTAATGTACATCAATGTCTTCGAAATTTCGTTTGGCCAGCACAGTCTCATATGTTTTTTGTATGATTTTACTTATAAATATTCGTGAACTATGTTTGTCCTATACTTTCTTTAGGGGCATCTAAATCATTCGAGTTTATTACTCGTCTGGAGATATTGTTCTTCATATTAATTATTTATAGCTTTTTATATTATTATTTTTGGCTTTTATCTTTAATTCAGTGTGTTGTGGACATTTTTGATTTTATAAAAAGTTATTTATAAGTTTCCCGGTTTTTAGTATTAATAAAGGGCACATGTTTTTTAAGGAAAAATTCCATGAGGCGCTTGATCAGGGTTTCGCTACAAAATCAACATGCCATCGCGGCGATAAGTTTTGAAAACTGTCCAGCGAAAACCCGGATG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACACGCGTGGGGGTGTTTC # Alternate repeat : GTCTTCCCCACACACGTGGGGGTGTTTC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 481898-483938 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABWVI010000004.1 Klebsiella pneumoniae strain ZKP149 isolate ZKP149, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 481898 28 100.0 33 ............................ CAACTCAGGGGCAGTTTGATGCAATGGTGTCGC 481959 28 100.0 33 ............................ CACATGATAAAGGTGAAGTGATGAAATTAAAAG 482020 28 100.0 33 ............................ CAGGCCTTTTCTCTGTCGTAAGCGTAGGGCGGC 482081 28 100.0 33 ............................ TAATCAATGCGGCTAGGGGGCACCCGAAAAGCG 482142 28 100.0 33 ............................ TCAACGAAGTAAAAGATATGATTGATTCACTTG 482203 28 100.0 33 ............................ TATATGACACTTTCTGATGCACAGGCTGATATT 482264 28 100.0 33 ............................ TAGGTGATTACCACGGAGACCCGGTAGACGTGT 482325 28 100.0 33 ............................ TATACTCACTCGCAAGAGCTGGCGTGTCTGATG 482386 28 100.0 33 ............................ TACAGTGACATTGAAGTTAATGTATTTGATGGA 482447 28 100.0 33 ............................ TGGCCGATTCCCTGATATTGATCGCGTCATTCC 482508 28 100.0 33 ............................ TGATGAATGATGATGGGCTGCTTGAGTGCGCCC 482569 28 100.0 33 ............................ TTAGTCGGTGAACGGGTTAAGGCTGTTTATAAG 482630 28 100.0 33 ............................ CCTGAATGACTGCATGATGCTTACCAGTCTCCT 482691 28 100.0 33 ............................ TGATGCTGCACGTTACATTCAGAGTGTTGACTA 482752 28 100.0 33 ............................ CATGATTCACCTCACGATAAAGTATATAGCCAG 482813 28 100.0 33 ............................ CTGATTCAGATACATCACCGCCACCGAGATAGT 482874 28 100.0 33 ............................ CAACAGGGTGGCGCAGATTTTTAGGGCCAGCCT 482935 28 100.0 33 ............................ CGAGTGATCAACTCGATTGTCGTCGCGTTCTGC 482996 28 100.0 33 ............................ TATACGCTAAGGCCATACCAGCAGGAAGCGGTT 483057 28 100.0 33 ............................ CGCGACGACCTCGTCATCCTCCCCGCTGCGGCT 483118 28 100.0 33 ............................ TACACCCAGCTCTTTGACGCAAAGGCTCAGGAG 483179 28 100.0 33 ............................ TCCTTGGTTCGTTTCTTCTGATGTTTGCAAGGC 483240 28 100.0 33 ............................ CTGGTTGACGTATGCCGTGATGCTGCTGGTAGG 483301 28 100.0 33 ............................ CGCTGTATGCCCCCCATCCTTCGCAAGCACTAC 483362 28 100.0 33 ............................ CGATGACAACTTTGCCTACTTCGCTGCGCTGGC 483423 28 100.0 33 ............................ TTCCTCTTCTTCCTGACAATCAGCGCAGCGCTG 483484 28 100.0 33 ............................ TGCGGGTGGATGACAATAACGCCTGGCGCGCCG 483545 28 100.0 33 ............................ CCTGTTAAGGATGACGCGGGGAAATGGGTTATC 483606 28 100.0 33 ............................ TCGATGGCGAGCTGCTGGTGAAAAAGTCGATAC 483667 28 100.0 33 ............................ TCCAGGCCAGATCTGTTTGGGTTGGTGTCGAAG 483728 28 100.0 33 ............................ TGAAGGTGAGCGCCAAAAGGAGTGGAAGCATGC 483789 28 100.0 33 ............................ CGGCTGCGTTATCCGGCAGCACGAACTGGACCT 483850 28 100.0 33 ............................ TGACCTTAGAGGCTTCACTCAGTGCCACTTTTT 483911 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 34 28 100.0 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGGGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATCAATGAGCTGATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTGCGTGGACGAATGAAGCTGTGGTTTGTCGAACCACGGCCAAATGTTTTTGTCTCAGGCGTCAAAGATTCGGTCGCGCAAACCGTTGTTGATTACCTGTTGCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGTGAGGTCAGAAAGCCGATTATTGATCTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATTGTGGTTAAACTCTCGCTCTTTCACAATATGTTGGT # Right flank : CTTGTGAGGGGTCTACCAGCATTGGCGTACTGGAGTCTTCCCTACACATGTGGGACTTAGCAATAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGGAGAGGTAGGAATATTTTATTGCGAAAGAGAAGGGAACTGTTTAAAGCAATAACGGCGAATGATTCTTATAAAATGAAGGATAGGGAATTCATATGTTTCGACTTTACCAGTCACATGATTTAATACGCCAATTAAATCCTGAAGACTTTCAATATATTTTGACACCAGCAGGTTCGCTAAGAGAAGCGTGTATAAATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCTTACCGAAGGAAATATACAACTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACGTAGCTATGCAGATCCTATCTATGATGAGGTAGAGCACAGGTTACAAATTGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //