Array 1 344975-344600 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDBO01000077.1 Streptomyces sp. sk2.1 Scaffold_77, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 344974 29 79.3 32 G..A........C.T......T......A GTGAAGGACTTCGTGAAGGGCCTGATCCCTGG 344913 29 100.0 33 ............................. TCGGGACACTTGTTGGCCAGGAAACAGCCGTCG 344851 29 79.3 32 G..C.......AC..T............G CCGTAGAAGCGCGCGTTGCCGTCGGCGTTGGC 344790 29 96.6 10 ...T......................... GGGCCGGAAC Deletion [344752] 344751 29 58.6 32 TGATG.AGTT.CG.......A........ GGCTTCGACGACGACGGCGGCCCCTTCGAGCA A [344730] 344689 29 86.2 32 G...........C.T...A.......... GGCCTGGACCGCTTCGGACAGGGCGACGCCTT 344628 29 75.9 0 G..........ACAT.T....A....... | ========== ====== ====== ====== ============================= ================================= ================== 7 29 82.3 29 ATGGTCCCCGCGTGGGCGGGGGTGGTCCC # Left flank : GATGCTGACGTTCCGCGCGCCGGTGTTCAGCGTCTCCTACGGGCCGGCCGGGGTGAGGTACACCGGGATGTTCGGGACGCGCTCCCATGCGTGGGCGGACGTCCTGGAGGTGCGAGTGGCCGTCCTGTCGGGCAAGGTCTACCAGTCCGATGTCCCGGAGCTGGTGCTGGCCTCCGGCGGGACGGACCAGCTGCTGATGATGGGGGGCCACAGCTGGGGCCGGGCCCGGAATCGGCGGGTCGTGCGGCTGGTGGCCCAGCTGGAGGCGGCGCGCGTGGCCGCGTCCTGACGCCGGTCGCTTCCACCGGCGGCGCGCGGTACCGGCAGTTTCCCGATACCGGTTTCCCAGCAGGCTGCTCGGGACGCGGACGTTGGGTCATAGTGGGCTCGGGCGCGAATGCCACAGCAGCGGTTGCCGGACCAGGTTCGGCGGCAGATTTCGACCTCGGCGGCATCCGCCGCGCCGAGGTGATGACTGTCGTGCTTCGGCATACGGCCCA # Right flank : CAAACGCTACACAGCCAGGGTCCGTGATGCAGTGGCCCCGCCCATGCCGGGCCCGTAACGGCAGTACACCCCCCGGCCATCGCCGTGCCCCTCAGTCCGGCAGCAAATGCCCCCGGCGGGACAGGAGGAAGCGTTTGAAGGCGGCCACCGGTGGGGTGTCGGGGTGGCCGTCGAGCCAGGCGACGCCGATTTCGCGGGCGGCTCTCGGGGCCGTGACCGTCAGTTCCACGACTCCGGGGCGGGCGACCGCCGGAGGGGGGAGGAGGGCGACGCCCAGGCCGGCGGCCACCAGGCCGCGGAGGGTTTCCGCCTCCTCGCCCTCGAAGGCCACCCGGGGGGTGAAGCCCGCCTCGGCGCACAGGTCGTCGGTGATCCGTCGCAGGCCGTAGCCCGGTTCCAGGGTGACGAACTTTTCGTCGGCGGCCTCCGCGAGGCGGATGCGGCGGCGGCCGGCGAGGCGGTGGTCCTCGGGGACGACCAGGCGCAGGCGTTGTTCGTCC # Questionable array : NO Score: 2.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.11, 5:-1.5, 6:0.25, 7:-0.35, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGGTCCCCGCGTGGGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCGCGCGAGCGGGGGTGGTCCG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.60,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [11-11] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 346070-345858 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDBO01000077.1 Streptomyces sp. sk2.1 Scaffold_77, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 346069 29 100.0 32 ............................. CACTCGTCCGGGGAATGGCGGCGCCCGCCCTT 346008 29 100.0 32 ............................. ATCCGCCTCGCCCGCGCACGGCTAGTCGTGCC 345947 29 93.1 32 .CA.......................... TGGTAGAGGGAGGCGAGCATCATGCCGAAGTT 345886 29 93.1 0 A.......T.................... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 96.6 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GGCTGCCGGAGGACGGGACCGACCACACGGAACCGGTGAAGCACCTGCTCGGCCGCCAGGTCCTCCTCGTACACGGCACCAACGACGCCCGCACCGACCCCGAACTCTCCTTCCGCCTGGCCGAACGCGCCAAGAAGACCAACCGCGACACCTGCCGCTTCGAGGTCCACTCGGACGGCCACTCCCTGCGCCAGCACCGCTCCGAGGTCTCGGCCCTGGCAACCGACTTCATCCGCGGCTCCCTCTTCGGCCGCCCCTACGCCCGCCCGGTCGCCGACGCCTTGGCGGCTCCGCCGCCACTGGGGCTGCGGATGCCGCTGGCGGCGGGGTTCGGAAAGTCCTTGCGGAACTGAGGAGTTGAGAAAATGACCCAGGACGATCGCACCGCATGGACGCCACCCTGCCGCCCAAACGGGACAAACCTTATGACCGTTATGCCGGAATCAACGAAAGTAAGCAAAATCGACACTCGGGCGCGATAACGTCGCAGGTCACGAACG # Right flank : GCGCCTACCTCCTGTTCGCGCTACTTGCCACTTTCGCCGAGTGCTGAGCGTTTCTGGCACTGGTTGACCGTGGTTGAGGCCAACGTGCCGATGGCGATATGGACGTAGGCAATCGGGGACAGGACCACGAGGGAACGGCCACTGCGCCGTTCGTATGCTTGTCCACGGGCGGTGGCGGCGTCCCCGGAGCGCGGGCCGCGAACGGCTCCGCGCGCCACGCGCTGCGGAACTGGGGGAACAGACATGCGGAAGAGGCGCCCTCTCTCGGCGATCGGCTACTTCCTGATGGGCAGTGCGTGCCTGCTGATCGCCGTGGTGATGGCGGCGGGCGTGCGCGACGTGGTCAGTCTGGTCCCGATCGTGATCCTGGGCGTACCAGGCGTGATGCTGACGTTCCGCGCGCCGGTGTTCAGCGTCTCCTACGGGCCGGCCGGGGTGAGGTACACCGGGATGTTCGGGACGCGCTCCCATGCGTGGGCGGACGTCCTGGAGGTGCGAGT # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //