Array 1 126896-130107 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJELG010000018.1 Acinetobacter baumannii strain MRSN3362 MRSN3362_contig00018, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 126896 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 126956 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 127016 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 127076 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 127136 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 127196 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 127256 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 127316 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 127376 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 127436 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 127496 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 127556 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 127616 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 127676 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 127736 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 127796 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 127856 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 127916 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 127976 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 128036 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 128096 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 128156 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 128216 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 128276 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 128336 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 128396 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 128456 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 128516 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 128576 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 128636 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 128696 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 128756 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 128816 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 128876 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 128936 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 128996 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 129056 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 129117 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 129177 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 129237 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 129297 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 129357 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 129417 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 129477 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 129537 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 129598 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 129658 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 129718 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 129778 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 129838 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 129898 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 129958 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 130018 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 130078 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //