Array 1 149926-150132 **** Predicted by CRISPRDetect 2.4 *** >NZ_VOXT01000003.1 Acinetobacter sp. Q22-2 NODE_3_length_241602_cov_73.231713, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 149926 28 71.4 32 TACG..CC....AC.............. ATTCCGCTCTGCTGGCTGGAAATACCTGTCTA 149986 28 96.4 32 ............A............... ATTCGCCAAAGCAATCAGCGCCTCTTCACCAC 150046 28 100.0 32 ............................ ATTCACCAGAATTTTCAGTATGACAGGACCAG 150106 27 96.4 0 ........................-... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 91.1 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : AATAGCCAACAAGCCCCATAAGTTATGGTCATGGGGTTTGTTGTTTGGACTGCCACCACTCTCCGAGATAAATAAGGCCGTACAGCCTTTACGACGTAACAACCCTGATGAACATGAACCTCTCGAAGCAAAGAAAGAAATCCTTTGCCTTAAAGCACCGAACGTTTCAATTGCTTCGGTCGCTTTGCAACATGGATTGAATACAAATCTTGTATCCAAATGGATTCGCTTAATTGATGGTAAGCCAGGGAATGATCGCTCACCACTACCGAATAAACCTGCATTTATTGCCTTATCTTGCTCTGCACCATTAGATCCTACTCCTACTGACATGTTAACGGTTCAAATTACTTTACCCCACTCAAAAGCAGAAATTGGCTTGAAATGGCAAGTATCAGAAATATCTGCTTTAGCAGAATTACTCAAGGCACTTGCAACATGATCCATATCGATGAAATCTGGCTCTCTACCCAGCCGATGGACATGCGTGCGGGTATGGA # Right flank : AACACCCAAAATAAAACCGGAGCATCGCCCCGGTTTTATTCTTCATCTATTTATTCTTCTAACAGGCTTCTTAACATCCAGGCAGTTTTTTCATGGACTTCCAATCGTTGGGTCAGTACATCCGCAGTTGGCTGGTCATTGGCTTCTTCCACCACATCAAAAATACTGCGTGCGGTACGGGCAACTGTTTCATGGGCACGAACCAATAACTCCACCATTTCATTGGCTTTTGGTACACCTTCGACTTCTTCAATCGACGCCAGTTTTACAAATTCTTTATAGGTTCCCGGCGCCGGAAAACCCAGCGCACGAATCCGCTCGGCAATAACATCCAGTGCATTCCATTGCTCGGTATATTGCGTCATAAACATGGTGTGCAGGCTGTTAAACTGTGGCCCGGTCACGTTCCAGTGGAAATTATGGGTCATTAAATATAGGGTATAACTGTCGGCCAGAAGTCGGGAAAGCCCTTCGACAATTTTGGCCCGGTTATCTTCAGA # Questionable array : NO Score: 3.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : I-F [Matched known repeat from this family], // Array 1 217372-215904 **** Predicted by CRISPRDetect 2.4 *** >NZ_VOXT01000001.1 Acinetobacter sp. Q22-2 NODE_1_length_425761_cov_56.960041, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 217371 28 100.0 32 ............................ TGAGCGATAAGCTGCACAAGCAACGGCACTAC 217311 28 100.0 32 ............................ TGGTGGTGAGGCTGTCAAAATTGGGCATCATT 217251 28 100.0 32 ............................ TTGCCATCACGGACGGCGTTATTGTAGCTGTG 217191 28 100.0 32 ............................ TATCGGGTATCTGGTGGACCAAGTGTTTTATC 217131 28 100.0 32 ............................ ACAATTGCGGCACACAAAGAGCCTATTAATGC 217071 28 100.0 32 ............................ TTTGTTGGACAATCTAAAAAAATTGCCAAATA 217011 28 100.0 32 ............................ TGACTTCACATATTCGACAACTTCGTTTTCTT 216951 28 100.0 32 ............................ TAGATCAATATCAAAGTGTTCTTCATTCAATT 216891 28 100.0 32 ............................ TCAAATGCACGTACAAATTCAGCAACCCAATA 216831 28 100.0 32 ............................ TGATAGCTGAACTGGCGCACAAATAAGTCTTT 216771 28 100.0 32 ............................ TATGGATATGTGGACAGCAGCAAGCTGTTTCT 216711 28 96.4 31 ....................T....... TCGTAAGCTGATGATTGCTGATCAATATAAA 216652 28 78.6 32 A........T.C.C.A....T....... GTTGGAGTACGCATAACTGAAAAACGCAAAAT T [216648] 216591 28 92.9 32 T..T........................ AGCTTATCATTTAGGTTTTTGGAAACAAAAAA 216531 28 100.0 32 ............................ GGTGCTTGTTACGGCTTCACTAAACGAGACAG 216471 28 96.4 32 ....................T....... AGTATTGGTCGCAATTTGACGTTGCAATTCGT 216411 28 100.0 32 ............................ TTGATTACTAAAAAACAATCGTTGATTGCCTA 216351 28 100.0 32 ............................ TTAAAAGCAAAGTATACCTTTCAGAGAAAGGA 216291 28 100.0 32 ............................ AGTCTGCGCGAAGGTTCGCACTAGAGGCATTA 216231 28 100.0 32 ............................ ATGCAAGTGATGTAGCAAGAGCAAATAACATG 216171 28 92.9 31 .............C......T....... TCGTAAGCTGATGATTGCTGATCAATATAAA 216112 28 78.6 32 A........T.C.C.A....T....... GTTGGAGTACGCATAACTGAAAAACGCAAAAT T [216108] 216051 28 92.9 32 T..T........................ AAGACGAAATCGCAGAAGTATTGTATTCAAAA 215991 28 100.0 32 ............................ GGAGCTATTGCTTATCGTGCTGCATGTAAAAT 215931 28 85.7 0 .....................C..T.TC | ========== ====== ====== ====== ============================ ================================ ================== 25 28 96.6 32 GTTCACTGCCGTATAGGTAGCTTAGAAA # Left flank : AGAGAAACTGAATATTCGCAAATGGTTAAGCCGATTAACTGACTATCTACATGTTTCCTCTATTAAAAGCGTTCCAAGCGAAATTAATGGCTATGCTTCTTATGGTAGAAAGCAAAACTTCAATAGTTCGTATATAAAGCGATTACAGAGACGAGCTATTTCACGTAACAACGGCGAAGAATCAAGAGCACATGTGACTTACTGTGATCTGCCATTCATTCAGCTTGAAAGCTATAGCACTTCATCAGGGGAGAGCGGTGATCGGCATGGATTCAATCTGTACATTCAAAAGAAAGTGGTAGAAGCAAATGATAAATTCACTTTTTCTACCTATGGATTAAGTTCGGAATCAGCAGTTCCCGAATTTTAACCCTATAAAAAATCACTCTTTAAAAGTCTTATTAATACAACGCCTTACAACAGGTAGCTACAGATTGGGTATTTTAACCATTTTATCTTTAACTACTTGTTGTGTAGGATTGTTTTGTTTAAATTTTACT # Right flank : TAATCTTTTTTATTAAAAGCCTATCGTCTACATTGTTGTCAGGCGCTAAAAAAAGCTCCGAAGAGCTTTAATTGGTTTGACCTGCATAAGTGCGATAAGTACCATCAGCTTCAAACTCACACAAGTTTGACATTATAAAGCTTCGACAATATTTCGGGCATTTCAGCTTAATGCGAATGCTATTAATACGACTAATGAAGTGGCGATCATTAATACAAGTATGTAAGTTTTTCTTGATGGCTGCACGAGCAGCAGAAACGTGCATCAAAAAGGCTTCTCGTTCTGCATCTAGGACATTTTGAATGGCGACTACTTGAATGTTTTCCGGTAGCTGATCTAAATGAAACAAGGAATTTTCTGTTAAAAAACTTTGGTATTCAGGACGAATGTTCATTTTTAAAATCCTATATCTAAGCTTTTAATGCGGTAGCTTTTCCGGTCGAGCATGCTGCTCTATATGTTATAGATTGTATCATTAAAACATGGCATAAGTCAATCTA # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 239435-240123 **** Predicted by CRISPRDetect 2.4 *** >NZ_VOXT01000001.1 Acinetobacter sp. Q22-2 NODE_1_length_425761_cov_56.960041, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 239435 28 100.0 32 ............................ TGCACTAGCCGGAGAAGTAGCGACTAAGCCAG 239495 28 100.0 32 ............................ TGTGTTTGTTGGTTTGAAAAGTAACTGCATAA 239555 28 100.0 32 ............................ TGCCGAGTACGGATCAGTTAAATTTGGTTTTC 239615 28 100.0 32 ............................ TCAAACATGGGAACGAACAGCCGATTATATTT 239675 28 100.0 32 ............................ TGGGCGAAGACCAGGTTAAGGGTCAAGGGAAG 239735 28 100.0 32 ............................ TTCCAACAATCTGCCACAATGCCATGTAAGTT 239795 28 100.0 32 ............................ ATCGAGGTCTGCAAGGACTTTATCATTTCTAG 239855 28 100.0 33 ............................ GCAAGCAAGGGAATCCTTCCCTTAACCCTGCAC 239916 28 100.0 32 ............................ GAAAGAAGTTATTACGCTTACAACCGCAGCTA 239976 28 100.0 32 ............................ ACCTTTAGCGAGGTGCTTTTCGAGTTCTTTTT 240036 28 100.0 32 ............................ ATACTTGGCCAAAACTCTTACAGTGAAAGATC 240096 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 12 28 100.0 32 GTTCACTGCCGTATAGGTAGCTTAGAAA # Left flank : TTTATTTGTGTGATGACACTTGGCATGTACTTATCTATGCGCTCTCTAATTTTTACCGCGCTTTTAATGTGGTCGAAATATATTAAACCAGTTATTTGATTTCCAATAAGTAGGTTCAGTGGCGGTAAAACAACTATTGTTGTACCAGTGCCTAACGATGGTTCAAGACAAGGTGTATTAAGCCTAAATGACGGCCAAATTAGTCAGTAATTTGAATTAACAGATCGCAAAGGTGAAGTACCTGCACACCAGGGCATGACGACCTATAAACTTTTCTACCAGTGGAATGATGCTATTCGTAGCCTACATCAATAACAATTTAAATAACTTGACGGATTAAGTTCAGAATCATCAGTTCCCTAATTTCAACCCTATAAAAAATCACTCTTTAAAAGTCTTAATTAATACAGTATCTTACAGGAGGCAGTTAAAGATTGGGTATTTTAGCAATTTTATCTTTAACTCCTTGTTGTATAGGGTTGTTTGGTTTTATTTTTACA # Right flank : AGTTAGTGGCTTTAAGTGGGGGGGGATTGTTAGGTTCACTGCCGTATGCCAGGGTTTTTATTGTTCAGAATACCTATAAATGAGATTGATCTGATAACGTGTATTACGTCCACCACCTTTAAGTTTTTCTCTAAAATTTTAAATGAGTTGAATAGAATATATATTCGGCTCAAATAGTGAGCTGAATATATTGCTTAATTAGCTCACCTCTTTACTGGTTTATATAAATACAAACGTAATATTAATTGACTTATGCCATGTTTCATATAATAATTTAAGCCATAAATTAAATTATTCTTATTAGGATTTATCATGGAAAATTATTTTATTTCTGCAAAGAATAAATTAGCTGAGGCAAATGAAGATAATACCGGCGTATTACTTGACTCTAACGAAGCTGCTGCACTTTTTGAAGTGGTAAAGTCAATGCACATCATGAACTTGAAAGATAGCTCAAACACTTCAACGATTACCCCTAAAAGCCCGGCCATTTGTACAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //