Array 1 662398-662907 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ269844.1 Escherichia coli strain 225-2935 aervW-supercont1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 662398 28 100.0 32 ............................ AGCAGCTTTCCAGCGAGCGCGGTTAACTCACT 662458 28 100.0 32 ............................ AAAACGGCGGGTTTTTTACGCGTGTGGCTGCA 662518 28 100.0 32 ............................ GTTAACCGTTTCACACTTAACACTATGAACCG 662578 28 100.0 32 ............................ AGAACTCGAAATTTATCGCGGGACTTTTCAGC 662638 28 100.0 32 ............................ AGGCTGCTGGCGCTCTCGTTGTTAACGGCAGC 662698 28 100.0 32 ............................ GTTCCACGCGGATATCTGTAATTTCCAGCAAA 662758 28 100.0 32 ............................ GTTCCACGCGGATATCTGTAATTTCCAGCAAA 662818 28 100.0 32 ............................ CTGAACGTTGAAGAGTGCGACCGTCTCTCCTT 662878 28 85.7 0 ....................A...C.CT | T,C [662898,662902] ========== ====== ====== ====== ============================ ================================ ================== 9 28 98.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AAATTCATCGTCGAGTTGCAGGTTCAGTTGGATCAGAAAGGTGTTTCTCTGGAAGTGAGCCAGGAAGCGCGTAACTGGCTGGCCGAGAAAGGTTACGACCGGGCAATGGGCGCTCGTCCGATGGCGCGTGTCATCCAGGACAACCTGAAAAAACCGCTCGCCAACGAACTGCTGTTTGGTTCGCTGGTGGACGGCGGTCAGGTCACCGTCGCGCTGGATAAAGAGAAAAATGAGCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTCAGGTAGGTTGGTCAAGTCCGTGATCTCGTCAGGGGTTACGGACTTTTTATTTATGGGGGGAGGAGGTTCAGACCCTTTTTTTAATGATGATGCTAAGTTATTGATAATTAGTGCTGCGGGTAGGTAAGGATAAAAAAGGGTGGCAGCAGGAGATTGAGATGGTTTTGCTTTATTAACAACGGGCTAAACGTGTAGTATTTGA # Right flank : TACGATAGTGTTAGACGTTTGGTCGTGCAATGACACTCTCAACTTCAAACCATTAGCGTTAGCACGCAATAACAATCGTAATAATTGCGATGGAAATCAATTTTCAGCACATAAATCAATGCTGTACTAAGCCCAATACCTTCAAATATAAAATAATCACAGGATGTGTTTATGTCTTCGAATTACCTTACGCCTTCCGATCTCAAAACCATTCTCCACTCCAAACGCGCCAATATTTATTATCTGGAAAAATGCCGGGTACAGGTGAATGGTGGGCGGGTGGAGTATGTTACCAGCGAAGGTAAAGAGTCGTACTACTGGAATATCCCCATTGCGAATACCACGGCGTTGATGCTGGGAATGGGAACTTCCGTTACCCAGGCGGCGATGCGTGAATTTGCTCATGCCGGGGTGATGGTAGGCTTTTGTGGTACGGATGGCACGCCGCTGTATTCAGCAAATGAAGTGGATGTTGATGTCTCCTGGCTCAGCCCACAAAG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 671965-673794 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ269844.1 Escherichia coli strain 225-2935 aervW-supercont1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 671965 28 100.0 32 ............................ TGAAAGTTGACGCCAGCGGCGACCCGCGTCAC 672025 28 100.0 32 ............................ AAGGCAAGTGATGGCGAAATTACCCGCGCAAT 672085 28 100.0 32 ............................ AAATTGGGGACACTTTCTTCTACCTCTTTTGT 672145 28 100.0 32 ............................ TCAATGCTGCTAAACGCGCACATGAAGAGTCA 672205 28 100.0 32 ............................ GCGCACGGCGTGGCGACAGAGAGCACGCCCGC 672265 28 100.0 32 ............................ AGTTCGGCATGAGCAGCTCCTCTGTAGTCAGA 672325 28 100.0 32 ............................ AGCCAAAATAATGCGTCGCTTTCTGACATTTT 672385 28 100.0 32 ............................ TCGAGCGTACCAGGTTTACTGTCGTCATATAC 672445 28 100.0 32 ............................ ACAGAACAGGCGAAAGAAAGGGTACGCAGTAA 672505 28 100.0 33 ............................ TGGATTCCAAACCGCCCACCAACAAAAACAGGT 672566 28 100.0 32 ............................ GATACGATCGAATTTAGTCACTGAATACCCCC 672626 28 100.0 32 ............................ GGGTTGCGCAATGGGCTGGCCGACGAACGCGG 672686 28 100.0 32 ............................ AGGTCGTAAACCCCATTTTCAAAACCAATCAG 672746 28 100.0 32 ............................ TGTGGCGCTGATGCGTCTGGGCGTCTTTGTAC 672806 28 100.0 32 ............................ GCGCGCAGTGCCTGATAATCAATTTTGCTCAT 672866 28 100.0 32 ............................ TGTACGGCAGTCTATTAGCTATAGGAGCCTGA 672926 28 100.0 32 ............................ AGCGTTCGGTGAATATTTTCCGCCCGAGTCCA 672986 28 100.0 32 ............................ TGGGGATATGCGCGGGATTTGGCGGTGGTTTA 673046 28 100.0 32 ............................ GTAGAAGCTCACCATCAGCGCGTCTTTTTTGA 673106 28 100.0 32 ............................ ACATTTCCGCCGTTATGAATCGGTATTCCATA 673166 28 100.0 32 ............................ ATCCTGGCAGAACAACCAGTCAGCAGATCCCC 673226 28 100.0 32 ............................ AATTCGTGCTGGCGCGGGTCGTGGCATCACGT 673286 28 100.0 32 ............................ TGACGTCGCGTGAATATGACGCCGTTGTTTTT 673346 28 100.0 32 ............................ TCATTCTGTACAGAAAGATCAACCATAATATT 673406 28 100.0 33 ............................ GTTCGACGATTGAGTCCGCCGCTGTTGTTTGAT 673467 28 100.0 32 ............................ CGGCGGACCACTCATCATCGTATAAATCTTTC 673527 28 100.0 32 ............................ GCAAACGGAATTAGCAGCAGCATGATCAAAGA 673587 28 100.0 32 ............................ GACGAATGCCGCACACCAGGGCGTCTCGTCGT 673647 28 100.0 32 ............................ CTGGAGGCGCTCACACTCACGCGGAGTGAGAC 673707 28 100.0 32 ............................ GAATATTTTGGAAAAATAGCTATCAATCCGGG 673767 27 92.9 0 .......................-C... | T [673787] ========== ====== ====== ====== ============================ ================================= ================== 31 28 99.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CCTTTTTATGCGCGCCATGCCCACCGCATACAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAAGATGGCGGTGAGGCGGGGATTCGAACCCCGGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTGCCAGACCTCATAGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTGAAACGGTCAAGAAGAATTTATATAGATTGATTTGTTTGGTTACGCAATGAACACGCTGTTCGCGGGACGGAGATTATGACCGTATGTGTTCTGGTCAATTGTTTATCAAAAGCTATGCAGAAAATATGAGATTGAAGAAATACCAAACCGACCCTTTTTCTAGGTTGTAATGTAACTCATTGATTTTCTTATTGCTATTTTGAAGTCTGGAAAAAGGGTTTGAATCTGCGATTTTGTAAGTTTTAACAGTAAATCAATCGGATAGTCTGCTATTATTCCA # Right flank : ACTCAACACTCCATCCTCTAATATTTATTCCCCATAACTCATAGACGCAAAAAAGGCCGGTTAAACCGACCTTTTACTCATTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAACTCTACGCGGAACATGGTATTAGGCAACGTTTCAAGAACGGTACCTTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTGTAAATAAGTAAAGATTTGCGCGCTAAATCGCAACAAACAGGTTCGGCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //