Array 1 13559-10817 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJGUX010000017.1 Limosilactobacillus reuteri strain AG_3_1_1 scaffold17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 13558 36 100.0 30 .................................... TGTACGAAACGAATAAAAGAAAGCCTAGCC 13492 36 100.0 30 .................................... TTAGTGGACGGCGCTTGGCCTATGGTTATT 13426 36 100.0 30 .................................... TATTCTCGTACTCAGGGGGGTCCAAATATA 13360 36 100.0 31 .................................... ATGGAAAGAATGCCCAACACAGTAAGCTTCA 13293 36 100.0 30 .................................... CAACCGCAAAAAGCCTGAAAAACAACGGCT 13227 36 100.0 30 .................................... GCTAAATCGTCCGCGACTATTAAAAAGCAT 13161 36 100.0 30 .................................... CTACTAAGAGTTCTAAGACTATGCGTCACT 13095 36 100.0 30 .................................... CACTTTGTAAGTCAACCTTCGTCATATTGT 13029 36 100.0 30 .................................... AAGACTTTGGAAAGATTGGACGAAGCATAG 12963 36 100.0 30 .................................... ATGCAAGACTTTCTAAGTGAAGTTGAGCGA 12897 36 100.0 30 .................................... TACACTTAAATACTGATTTATTAATGACTT 12831 36 100.0 30 .................................... TAAAGCTGAGGGAAATACGGCAGAAGCTCA 12765 36 100.0 30 .................................... GAAAGCGAGGATGATTAAACATGGCTCAAT 12699 36 100.0 30 .................................... GAAGTAACAATGTTATTATAATAATGTAAG 12633 36 100.0 30 .................................... TAAACACGGGTTGCCCATCATTGCTGACGG 12567 36 100.0 30 .................................... AGCCATTGCCACCCAGCTCCTTTACGTTTT 12501 36 100.0 30 .................................... CTGTCATAAGAAGACTTGTCTGGGTCAAAG 12435 36 100.0 30 .................................... CCACAAAAGTAATTAATGGTATTCCCAAAG 12369 36 100.0 31 .................................... TTTAACCTAACAGTTACCACACCAAGTGACG 12302 36 100.0 30 .................................... TGATAATATTATCATAATCAAATTCTTGCA 12236 36 100.0 30 .................................... TAAAAAGCGTTAAATTGCGGGCAATTGCAT 12170 36 100.0 30 .................................... TACGCTCATGGCTAACCCCTGCTTATATTC 12104 36 100.0 30 .................................... ACTAAAGTGTTTCCAAGCTTGGCTACAGGA 12038 36 100.0 30 .................................... CCATATAAAGTTGATGAGGATAGGAACCTG 11972 36 100.0 30 .................................... AATCAAATATGGCAAATGAAGTAACATACA 11906 36 100.0 30 .................................... ATGGTGTGCTGTTTCAATTTGGTAATAAGA 11840 36 100.0 30 .................................... AAACACACCAATGAATATCTGTTAGAGCGG 11774 36 100.0 30 .................................... TTATTTTGACTTTTTACTAGCTTGCAGTCG 11708 36 100.0 30 .................................... TAAAGAGTGGTAACGCTATGCAGTCTGCTA 11642 36 100.0 28 .................................... AACGCGCGCAAAACCGTAGTAACGCAGA 11578 36 100.0 30 .................................... TGCTACTATGAAGAAAATTCGGAACTTGGC 11512 36 100.0 30 .................................... TGCTGTTAATCCCGTGGATGGGGATGCTAG 11446 36 100.0 30 .................................... AAGATATTGATATTTATAACGAATTATTAA 11380 36 100.0 30 .................................... TCTACCGGCGGATGACGATTGTTGAGCCTT 11314 36 100.0 30 .................................... TTTTCAAGGTGGGAAATCATGGGTGGAAAG 11248 36 100.0 30 .................................... GATCAAATTAACAATGCAGTACGTTCTATT 11182 36 100.0 30 .................................... TCTCGATGACAGTGGTTAATTCCCTCGTTA 11116 36 100.0 30 .................................... CTAACTAACTCGCTCAAAGCAACAGTTGAG 11050 36 100.0 30 .................................... TTGGTAATTCAATGGCATACGGATGTTACT 10984 36 100.0 30 .................................... TCAAAAGCTTCGTCGGTAGCCTTCTCATCG 10918 36 100.0 30 .................................... AAAGCAATCAATGAAAACAGAATACAATAT 10852 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== =============================== ================== 42 36 99.8 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGCTATGATGGTGATATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGTCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAGATACTATGGAAATGCGAATTTTTATTATATTGACAGGGATTTCGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : AAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAATTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAAATAATGGCAACAATTAAAGAAATTGCGAAAAAGTCAGGGTACTCACCAGCAACGGTTTCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAACAAGATCATGACGGTGGCTACCGAGCTTGGCTATTGGAACAGCCACAAGAAAAACTCTCAGCAGCAACCAATTCGTCCTAATCTTGCTCTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTGCGTTTTTACGCAATGCAATTATTAAAGAAGTCGATGAGGTGGGAGCACAGGTTGAGATCTTTAGTAATATCAAAGATTTAATTGCGACGGCTGATTCGTTCCAAGGATTTATTGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //