Array 1 45775-49419 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGCK01000024.1 Kosmotoga sp. DU53 KosmotogaDU53_c34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 45775 30 100.0 35 .............................. TTATAGATCAAAGCAAACCATGACGGTAAATTTAA 45840 30 100.0 36 .............................. CTAGCAAAAGACGAAGACACGGGACATTACCTCCGA 45906 30 100.0 37 .............................. TGCCGTTGAGAATTCCTTCAGGCTGTTCATTGGCGTG 45973 30 100.0 35 .............................. GAGGAATTGCCAAAAACTTTTGATTTTGTCCAAGC 46038 30 100.0 36 .............................. TTGAACCTGGTTTTAAATTAGTTGCAGCAACTTTGT 46104 30 100.0 35 .............................. TCGTTGCTTCGGTGGCACGCTGCGGCGACCGCAAA 46169 30 100.0 42 .............................. TTAATCAAAATTCCGATAGCTGAACCAGCTTCCTGCCCGAAT 46241 30 100.0 38 .............................. TGGGACGGCCAACCGTGGGTTTGCGACATAGCCAGAAC 46309 30 100.0 34 .............................. TTTAATCAAATCAAAGAGCGTGGTTACTCTTCAA 46373 30 100.0 36 .............................. CCAGTATAAATATCTTGAAGTGTTTCAAGCATTTTT 46439 30 100.0 35 .............................. GTTTTTGTCAAGCGTTTTAACAAATAAACTTAAAA 46504 30 100.0 38 .............................. AAGCGTATTCGCTCCACTTCTCTTTTATGAACGTTATA 46572 30 100.0 35 .............................. CCTTACATACGTGTTCCCTTTCATGGTGCCCACAA 46637 30 100.0 34 .............................. AGTAAGTTTTCTATCAACGTTATGTCCTGTTCTC 46701 30 100.0 36 .............................. TCCAATGGATCCCAAGCGCTTTTCCAAGCTGTCTGA 46767 30 100.0 38 .............................. ATTTCCACGAGTTCTCCGTCTTTAGCAACGAGCGTTAA 46835 30 100.0 34 .............................. TCGGAAAATCAGCAGACAACCCAGATTCTCTCGT 46899 30 100.0 35 .............................. TTAATTTTCTTCCTGGAGGAGTGCTGGAACTTGAA 46964 30 100.0 35 .............................. GCAACGTGGCTAAACGGTAGTGCAACGCCGAATCA 47029 30 100.0 36 .............................. GACATTATAAACTTCTTTATGAAGAAGAGGAGGCGT 47095 30 100.0 40 .............................. CCGGGCAAAAACTCGCGTATGTCAGCCATACATGCGGATA 47165 30 100.0 34 .............................. TTTTATTTTTTCTTCATATCTTTCTATATCTTTA 47229 30 100.0 36 .............................. GAGAAAAGAGTTTTGTAATGCCTTATATCCTATATG 47295 30 100.0 36 .............................. TTCGCTGTCTTGACCGTTGCTATTCGTAACGGTCGT 47361 30 100.0 35 .............................. TTCGGGCACTGCGTGCAGTCCTCTGTATCCTTCGT 47426 30 100.0 35 .............................. CCAATCGTTTACTCCCTGTAATCGTCATAGATTTC 47491 30 100.0 36 .............................. TATTTCTCTGCAACATTAACTATCCGTGACTTCTGA 47557 30 100.0 36 .............................. ACCGCCTTTGTGGTGCTTCCTCTCAGGGAATTTTTC 47623 30 100.0 36 .............................. TTGAAAAATTTGACGCTAAGAGCCGAGAAAAGAATA 47689 30 100.0 36 .............................. AACTCATCCCAATTTGTGAAACTCGAACCTATGACC 47755 30 100.0 33 .............................. ATGTCCCAGCCTTTTAATTCTTCAAGTGTTCCT 47818 30 100.0 36 .............................. TAGTTTCTATCTATGGCTATCGTGAAAGTCGTTACC 47884 30 100.0 38 .............................. ACGGCTAACAGTCGATATTATGAGAAAAACTCAACCTA 47952 30 100.0 36 .............................. TTCAGTAAGCTTCTTAATAAAAAAATCGAAGTCGAT 48018 30 100.0 34 .............................. AGTGAATTTTTCCTTGACTTCCTTTTTGTTTCCG 48082 30 100.0 35 .............................. TTCCATACCAGCCAAACATCTTCACTACCGCCCGA 48147 30 100.0 34 .............................. GTTTTCTTCTTGCCAATATTCGCACTCCTTTTCA 48211 30 100.0 37 .............................. TGTACTTCTTCAATATAATTCGAATAAGTGCTAGCCA 48278 30 100.0 34 .............................. ATATGGACATAACAACACTGGCACCGGAAATAGA 48342 30 100.0 36 .............................. AAGAGAATAGGAGGAGGGAGTATGAAAATCATAATC 48408 30 100.0 35 .............................. TAGCTTTTTCAGTTCTTTCTTTTATCTTCTGAAGC 48473 30 100.0 34 .............................. TCGCCATCGGTAACCACCAGCACTAACGCTTCTA 48537 30 100.0 36 .............................. AGTTTCATTCTCTCTCCTCCCTTCTGAACGTCTAAT 48603 30 100.0 32 .............................. GCTTCTAAGCCGATAAACTGACCAACATTTTC 48665 30 100.0 37 .............................. CTTTCAGGAGAGAGATTAGCCAGAGCATTAGAAAATC 48732 30 100.0 36 .............................. TCCTTTCAGAACGTCCAAAAGGTTGCTCGCCTGCGG 48798 30 100.0 36 .............................. AGTATTCAAGTATAGAACCTTCACGATCAAGGCTAA 48864 30 100.0 34 .............................. ATAAATAGCTGCATTAAGAGCATTAAACGGAAAA 48928 30 100.0 35 .............................. TACTTCGAGTTGTGAAGGATTTCCGCGTAGTTTTT 48993 30 100.0 35 .............................. TTGTACTTCAGCGCCCAGTCGACTATCAAGTCTCC 49058 30 100.0 34 .............................. ATAAATAGCTGCATTAAGAGCATTAAACGGAAAA 49122 30 100.0 34 .............................. GTGCAATCGGTGGCCTGATAGTGGCGGCCGGTGA 49186 30 100.0 42 .............................. CTGGATACGAGTACAAAACCGGCGGCAGCACCGTTACCTTTC 49258 30 100.0 36 .............................. AGGCACAGGGTTACCATTCAAAAGCTCACACGCACG 49324 30 100.0 36 .............................. TTTCGTACACAATAGCTGTGTATTCTGGTAAATTCA 49390 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================== ================== 56 30 100.0 36 GTTTATAGAATACCTATGAGGAATTGAAAC # Left flank : CCTGCTGTTATAGAGGGGACCGCTTTCATGAAAATCCGGAAGTTTCTTCGAGACAATTTTGAAAATTAATGACTGAAGCATATGATTATAACTTATAGGAAGATCAATACTTTTATTACTCTCAAAAGCCAAAACGATTTTCACTTATTTCCTCCTATTTTTACCGTCAAGACACAGAAACCAAAAACACACCTTAAGTTTTTACAAGGGCATTTCTTTACGCAAGTATGCTTATTTTATGAAGTAACTCAATTAAATACTAACATATTAATTGTGTTGAATGCAAATATTTAGCATTATGTTATTTTTTTCAATCTGCTGCCACATATAAGAACATGTCGATGTCTAATAAGCAGAAATTCCTAGGAGATCGACAGAAACTTGTGAACTAGCGCAAGCGTCATTATTGGGTGAAAAGCTAAAATAAAGGGTGAAAAATTCCTTCAAAATTGATTTTTTTGAAAAAACCACAAAAGGTTATATAATCTATATAGTAATTG # Right flank : CCCGCACCGTTGTCCGAAATTGCGGGCTCCTATATCTCTGGAGGTGAATGAAGAATGGGTGACATAACAAGAGAAATAACCTACTTTGAATATTGTGGTGAAATAAACACCGAAAAAGTTTTGTCCCTTGCTAGAGAGAGATGCGGAAAACTAGGAATTAAGAAAGTGGTTGTTGCCTCAGAAACGGGTAGAAGCGCACTCAAAGCTCTCGAAATCTTTCATGGGATGAATATAGAAATGATTGTTGTTACTCACTACCCTGCGAGTACATGGGGACCGAAAGGTGACATCCCTATCGGACTTATGAGAAAAGAATACTCTAAAATACGGGAGAAATTGCTAGAAAAAGGTGTCAAAATTATCCAGGGCACAAGACCTTTTTCCCCTCCATCCAGACATATTAACTGGGAATATCCAACACCTGAAGGTATTATAGATAAGATCCTTGAAATTTTCGGCGCAGGTACAAAAATAGCTATTGAAGTGGCTCTTATGGCCAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGAATACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 2 50196-50683 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGCK01000024.1 Kosmotoga sp. DU53 KosmotogaDU53_c34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 50196 30 96.7 33 .........T.................... TAATATATTCAGATGTAGCTCCATCGAGTTCGA 50259 30 100.0 35 .............................. TACCAACCACTAAAATGACCTACCGGAAAAATTAA 50324 30 100.0 35 .............................. CAGAATGAGGTCATATAAAGCGCTTGCGAGAGACT 50389 30 100.0 39 .............................. AAGACTCCTATAAGGCGTTATAGGAGCTGGAAGTATTGG 50458 30 100.0 35 .............................. AGCAAAAAGCCAACGAGATGTGGAGCGAAGGGGAT 50523 30 96.7 36 .............................T TTCCCTATCCATTCCCAGGCACCATCAATATCGACG 50589 30 100.0 35 .............................. TAAAAATGGCAATAATCTTGTTGTCGATCAGGTTT 50654 30 73.3 0 ....T...GT.......A...GC.A...G. | ========== ====== ====== ====== ============================== ======================================= ================== 8 30 95.8 36 GTTTATAGAATACCTATGAGGAATTGAAAC # Left flank : CGAAAGGTGACATCCCTATCGGACTTATGAGAAAAGAATACTCTAAAATACGGGAGAAATTGCTAGAAAAAGGTGTCAAAATTATCCAGGGCACAAGACCTTTTTCCCCTCCATCCAGACATATTAACTGGGAATATCCAACACCTGAAGGTATTATAGATAAGATCCTTGAAATTTTCGGCGCAGGTACAAAAATAGCTATTGAAGTGGCTCTTATGGCCACAGATGCTGGAGAAGTGGATGAAGGCGAAGAAATCATATCCTGTGCAGGTACATACAAAGGTTTGGATACGGCGCTGGTTGTAAAAACGGCGTATAGTATGAACTTCTTTAAGAACTTTGAGGTTAAAGAAATAATCGCCAAGCCCAGATGCAGAGTGAAAGAACTCCCTGAATACAAATTTAAAAACTGGAAAGGTGACTTGAATAAATACTATGAATGGAAGATGGAGAAATCTGAATGATTCCCTGTAGATTTAGATACAATCTCTTTCCGGAGC # Right flank : CGTACACCGTGATACCACTACTATTGACACTCTACCGGTTTTTAGGTCATCTGTAGGGGGGAGTATACTGCTCCCTTGAAGAATTGGACAGGTAAAAAGTAGAGAGATAAAATAAAGGCAAGGGGGTGCAGTTAATGGCAAAGAAACTTTCGACAGAAGAAAAGATGGCAATAATTCTGGAAGGGCTTCGTCGAGAAAAGAGCGTTTCTCAAATCTGCAGAGAACATGGAATTTCACAAGCTCAGTATTACAAATGGCGTGACAGGTTTCTCGAAGGAGCCAAAGAAGGCTTGGAAAATGGGAAGAAATCCAGGGTAAAGCAGCTCGAAGAAAAAATCGAAGAACTCCAGAAGGTAATTGGGAAACAGACCATCGTCATTGAGACCTTAAAAAAAACAGTAGTACATCCAGGCAACGGGAAATAGTGACATTGCTCCTTGAAGAGGGATTTAGCGTTTCAGAAGCTCTGAGGTATTTGAAAATCAGCCGGAGCACGTATT # Questionable array : NO Score: 9.05 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGAATACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 1257-308 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGCK01000033.1 Kosmotoga sp. DU53 KosmotogaDU53_c15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1256 30 100.0 37 .............................. CATTACCGTTGGTTCCATCCAGCTTTATGGCGCTTTG 1189 30 100.0 33 .............................. ATTTTCTAGAATATGTCGAGGAAATTGATTCAA 1126 30 100.0 35 .............................. GTCAAAAATCCGATATTTCCAACTCGAAGAAGGCT 1061 30 100.0 38 .............................. CAGATAATCGGGTATCTAAATGACGCAGGAGATGAATA 993 30 100.0 36 .............................. ATGAGCGCGCGTCGATCGAAAATGGTTGTGCTGGAT 927 30 100.0 33 .............................. ATGAAGATAATCAGAAGAATCAGGGCACGTAAA 864 30 100.0 35 .............................. TCTATAGGAATACCAAGAGCTTCACGTACTCTGGT 799 30 100.0 36 .............................. GCTCATTCTGTTGGTTTCTTCCTGACTTCTGCTAAG 733 30 100.0 34 .............................. TCTATGATGAGGAATACCCGAGAGTCGGGATAAT 669 30 100.0 34 .............................. ATAAGGTCATCAGCGGTTACGTTGGTAAACGCTG 605 30 100.0 37 .............................. GTTTGAATAATCCTTTAAGAAAAGGTATGTTAACTGG 538 30 100.0 38 .............................. TATCTACCAGGGTATTCTTCATCAGGTCAGCAAAAAGG 470 30 100.0 38 .............................. GCTAATCGTGTATTGAAACTGAAGACAACCGGAGTTAA 402 30 100.0 35 .............................. AATAAACCCCGCTATCGCTGTCCCGAGAGTTGACC 337 30 93.3 0 ...............G........G..... | ========== ====== ====== ====== ============================== ====================================== ================== 15 30 99.6 36 GTTATAAGTCAACCAATGAGGAATATAAAC # Left flank : AATACCGTTAAAATACTTTTAGATAATAATGAACTGACATGGATTAATTTTAAAGAAAAGGTGGTCAGTACTTACACAATCAGTATTCCTCAAGGCAATAGACGAAAGACTATTTCATTACTTGAAGACTACATAAACCAAAGACTTGAAAACGTCCCAGATAGACTATATAGCTATTGCAGAGGTATTTATGTTCACAGAAAAGCTATTTACAATGATTCATTAGGATTGATTGAAGAGTAAATGTCGACCTGGAATAAGCGGAAAATACCTGGAGATCGACAAAAGCTCTGTAAACGTTTTGGAATAAGCCTTACAATTACAACTTTGTTTTCGTCAGAAGTATTTTTGGCGGAAATTAGGTGGTCTTTGACAAGGTCGACAGAAATATCTTGAATATTCTTCTGTGATAAGCTAAATATAAAGCGGACAAAAAGTTTGCAATTGTTGCTCTGTATATTAGTTCTATGGCGTTTTATAGACATTTTATGTGTAAATGG # Right flank : CTCATACATTCTCTCATGAATTTTTACGAAGTTAAGTGTATATGTGTATGGCAAAATAAAAATACAGCAAGTGGCAGGATAAAAATCCAGCAGTAAGGAAAAGAAAAAGATCATTGCCAGCACCCGGAAAATCCATTACCCTTTAATTGCACACCAAAACAGTTAAAGGGGGTTAGAAAGGAGTGCTGACAATGATCCAGATACATCATATCAAATATCTACGTGAATTTAAAGGGAAGTCGCTAAGAAATATAGCCAACGAAACAGGCCACGATTTCAGAACGGTGAAGAAATATGACGAAATGGAT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAAGTCAACCAATGAGGAATATAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 85786-87408 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGCK01000015.1 Kosmotoga sp. DU53 KosmotogaDU53_c21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 85786 30 100.0 37 .............................. TCGCTTAGAAGGTGCCAAAGTCCGGTGTCTGGGTTTT 85853 30 100.0 39 .............................. TACCGAAAGAGCATTTCTCGTATCATTGCTCAGTGGCAG 85922 30 100.0 36 .............................. AGTTCGTTGATAAGATCTGGGATATCATCGTAGTGA 85988 30 100.0 36 .............................. TTTTGCACCACGGAAACGGAAATACAGGCGTACATC 86054 30 100.0 36 .............................. TTTTAAATACATCTCTACCCATTTTTTTCACCTCCC 86120 30 100.0 35 .............................. CTACAACCAGATAATCCTTGTTTCGCTATTATCTT 86185 30 100.0 36 .............................. ATGTCGACAAGTGTTTTAGTCTATCTTGCTTTGTTT 86251 30 100.0 38 .............................. TGGGCTATGCCTTCGAAGTCTGCTAGGTCTTTTACATA 86319 30 100.0 38 .............................. TCCGGTATCTCTTGGCCCGGCTCGACCCTGAAATTTGC 86387 30 100.0 38 .............................. TCAGGTGTAATTTCCTCAAATTTGACGTTGGTTGGAAA 86455 30 100.0 37 .............................. CATGAAAGCTGAACATGGGTGCAAAATGGTATCTAGA 86522 30 100.0 35 .............................. ATTATCTTTTCTGCGACTTTTTCTGGGTTGTTTGT 86587 30 100.0 36 .............................. TCGGATCCCCACGCTGAAACAATCAAATATCTTTCC 86653 30 100.0 35 .............................. TGCTGACTGGTGGGAGAAAACTACCACGGGAACTT 86718 30 100.0 37 .............................. GTAACTGCTAATGAAATAGCAAGTGGAGCAATTACAA 86785 30 100.0 38 .............................. AAAGCTACTATGATAACATCGCCATATTTTTTAACAAA 86853 30 100.0 36 .............................. AAAGGATCGGCGGGGGTCTTTCTTATTGTTGCTTTT 86919 30 100.0 36 .............................. TAAATTCGTATGAAGGGAGTGATTAATATGTTCACA 86985 30 100.0 37 .............................. TTTGGCAGCGGGGGTGGGAATTGAACCCACTGACCTA 87052 30 100.0 35 .............................. GTGTATGAGCCTTCATCATTGATGAAACTATTTGT 87117 30 100.0 37 .............................. TCCTTTTTATTTTACGTAAAACTTTATATTCTGACTG 87184 30 100.0 36 .............................. TATTTTCGATGTCCGTAAAAGTACTACCAATAAATA 87250 30 100.0 35 .............................. AACACACTACTCACTCCTCGCACGCCGGACATAAA 87315 30 100.0 35 .............................. TAATGAACCTGTTGAGCTACCCGGGAAAGCGCCTG 87380 29 90.0 0 ........................-...TG | ========== ====== ====== ====== ============================== ======================================= ================== 25 30 99.6 36 GTTTGGTAAGAACCAATGTGGTATGGAAAC # Left flank : TTCACTTTGTAACAGTTCTCTGTAATGTGCTATTTTTCTATTTCACACACGTTAGTTTGCTTTCCTTATTGTCGGATCTCTGTTAAATTATATTACGTTTGTTACCGCGAGATGTTAAACGCTCGTTTTATACATCGTTAAATCGTACTATTTGCATTTTTATTAGTCGCTTTCAGAGCTTAATATATTTGTTACAGACCTTCGTCGAATCAACCGACCGGTAAAATTTTAGGTAATTCCTATCATTGATTAACTACCCACGCTATTTAGAAATTCTCTAAAATCCTTAACAGAGATCCGACAAATCCTTGGTCATTCGACTGTCAACTCGTTTACATTCACAGGGTTTACTGTACCCCTCTCCGGACAACGAATCTATATCTTATCCCTCCTTACAGATTAACTTTTTAGAAATAATTATTTCTCTCCCTATCAAAAATTCCCAAATTCCCTTGACTTAACGCATTGCTTTTCCTTATAATTTCCTTGTAATATATACT # Right flank : GGCCTGTGGCCATGAGGCTTGCGGACGCTGTCAGCTGATGGAGCGACGTTCGAAGACTGAGGCTTACGACGTTGAAGTAAAAACCAATTATGCAAGCTGGCATAACAGCCTTACTTCTTAGGAGGTACCGAATCCTCGATCTCAGATTTCATCAGCCTTGCAAGCGTCAGCCTCTGCAAGCGTCAACCTTGTGAGCGTCCGGAGCGCAGCTCCGCACTTCAGCGCATGATCCTTGCGCAAAAAAATTCTATTCGAACAACTCTTCCAATGTGTAAAGCCGTATTGTTTCATCATTTTTTGCCCTCTCCAAAAGTTTGTAGGTAAAACCAGACTTTGAGAACAAAACGTATATTTTTTTCTCAGTATTGAAAAGTTCACTTTTTTCAACAAGTTTATTCAAATCAGAAATGTCAACTTTTCGATTCTGCCATTTACATTCGCCAAAAAGCATGCCTTCATTTCCTAGGCCAACAATATCTATTTCTTCCTGCCTCTTTTTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGTAAGAACCAATGTGGTATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 104860-106027 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGCK01000015.1 Kosmotoga sp. DU53 KosmotogaDU53_c21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================================================================================================================================================================== ================== 104860 30 100.0 35 .............................. TTAAGGTAATTGATTCTATACTTCCCGGATTTTCT 104925 30 100.0 37 .............................. TTCCAGGATAATCGCGGTAAACACTTTTGATCCTTTC 104992 30 100.0 39 .............................. GTTGTCAAAGACCATATCTCTCACTTGCTTCTATATATA 105061 30 100.0 42 .............................. CTCAAAAGCGTCGTCATCCAGGTCTTTCAACATTCTGTACCA 105133 30 100.0 33 .............................. GTTTCTCTTTGACCGTGTTCTTCCTTCCATTTG 105196 30 100.0 37 .............................. TGGCTTCAATCTGCCCAGCTTATCTATGACTGGGATA 105263 30 100.0 39 .............................. TTAAAGCAAAAGCGAAATCAACATATGGAGGAACTGCCA 105332 30 100.0 35 .............................. TTAAAGTATTCTTCCCAATTAATTTCAAATGGGTC 105397 30 100.0 36 .............................. TTGACTCACATTTTTTTTTGCCATTTTTTCCATGGA 105463 30 100.0 36 .............................. AAAATGTTATCTAACCATTTAATGGTATTCTTAGCA 105529 30 100.0 34 .............................. GAACGTTGGAAATTGGCTTGTGCAGCGACTTCCC 105593 29 90.0 179 ........................-...TG GCCTGCGGCCAGGTGAGCACGCTTCGCGTGGTTGCGACTGGCTTCGCCAGTGTTTCGAACTCCTGCGGAGTTGTCCCGACCGGCTACGCCGGTGATTAGTACCTTGGAGCAGGAAAAACCTATTATTATGAACTTTTTCGTGTCTCGGATTCTCGGTTTCTCGGACTCTCGCGTTTTGG 105801 30 80.0 167 A.AC.......................TGG CCTGCGGCCAGGTGAGCACGCTTCGCGTGGTTGCGACTGGCTTCGCCAGTGTTTCGAACTCCTGCGGAGTTGTCCCGACCGGCTGCGCCGGTGACTAGTACTTTGGAAATGCCGCACAGCGGCTCTCTCGAGTCTCGGATCTCGGGTCTCGGACTCTCGTGTTTTGG 105998 30 76.7 0 A.AC......................GTGG | ========== ====== ====== ====== ============================== =================================================================================================================================================================================== ================== 14 30 96.2 58 GTTTGGAAAGAACCATAGTGGTATGGAAAC # Left flank : TTCACTTTGTAACACTTCTCTGTAATGTGCTATTTTTCTATTTCACACACGTTAGTTCGCTTTCCTTATTGTCGGATCTCTGTTAAATTACGTTACATTTGTTACCGTCAGATGTTAAACACTCGTTTTATACACCTTTAAATCGTACTATTTGTATTTTTATCAGCTGCTTTCAGAGCTTAATATATTCGTTACAAACCTTCGTCGAATCAACCGACCGGTAAAATTTTAGGTAATCTCCATCATTGATTAACTACCCACGCTATTTAGATATTCTCTAAAATCCTTAACAGAGATCCGACAAATCTTTGGTCATTCGACTGTCAACCTGTTTACATTCACAGATTTTACGATGTTCCTCTCCAGACATGGAATTTATGTCTTTGACCCCTTTGCGGATTAACTTTATAGAAATATTTATTTCTACCCCTACCAAAAATTCCCAAAATCCCTTGACTTAACGCATTGCTTTTCCTTATAATTTCCTTGTAATATATACT # Right flank : GCCTGCGGCCGGTTGCGCACGCTTCGCGTGGTTACGACTGGCTTCGCCAGTGTTGCGAACTCCTGCGGAGTTGTTTCGAACTGCTTCGCAGTTGTAACACGCCTACGGCGGATTAGATCACGTTTTTTCCGCCTCAGTGAGCTACCAACCGTGGCTTGGAAGATCCCTCACAGAGATTGTCATCCTGAACTTGATTCAGGATCTAATCATCAAAAAAGCCCAGATTCTGGATAGAAGATTTCCAGAATGACAGTGCCCGATTAAGATTCTGGATTAAACATCTCCAGAATGACAGCTTTTTTCAATTGCGCAGCAGTTCGGGTCAACTCCGAAGGAGTTCGTGACAACTCTGAAAGAGTTTGGATCAATCCCAAAAGGGATTCGTATCCGCCGCACAGCGGCTCTCTCGTGTCTCGAACTTTCGAATTCACGCCTTTTCTTTATAAGGAGTGATCTGTTTGCGAAGATTTTTGTTATCAATTTTACTTGCAAAAATGGCT # Questionable array : NO Score: 3.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:-2.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGAAAGAACCATAGTGGTATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 3 122448-123778 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGCK01000015.1 Kosmotoga sp. DU53 KosmotogaDU53_c21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================================================================================================================================================================================================================================== ================== 122448 30 100.0 35 .............................. TGATAACCATCGGGAGCATTCATCTTCAAATTGCC 122513 30 100.0 35 .............................. TTCCACACAGATTCCTTTATTCTTGCAGCCTCATC 122578 30 100.0 36 .............................. TCAAATTCATCGAGAACATCTAAAAGAAAAGTATTA 122644 30 100.0 36 .............................. TGCTTTCCAGTCATCAAGTTCTGGAGGGCACCAATA 122710 30 100.0 39 .............................. TTTTCTTTTTTTGTGTTCTTTGATTCATTCCAGGAAATT 122779 30 100.0 39 .............................. TGAATTCGCTAAGAAATATTCCCAAAGAAGAGATTTCTA 122848 30 100.0 39 .............................. TTCAAGGATTAAGCCCCGGTTTTCCGGGGCTTCCATGTT 122917 30 86.7 245 ..........................GTGG CCTGCAGCCGGATCAGCACGCTTCGCGTGGTTACGACTGGCTTCGCCAGTGTTGCGAACTCCTGCGGAGTTGTTTCGAACTGCTTCGCAGTGGCTATGCGTTCCTGTGGAACGGCTTTGCGCCTTCGGCGGATTAGAACATGCTTTAGTCCGGCTCGAAGAGCCGCACAGCCGCGACGAAGGAGCACAAGTCCACACGTAGTGTGCTAGTCCTGACGAAGTCAGCATGGCGCGTACGCTCTTCGC 123192 30 90.0 38 .CC.C......................... TTATATATCCAAGCTTTCTTGTATATGTGATCATTTAG 123260 30 100.0 36 .............................. CTTTCTGCGCAAGTGGGAATAGCTTCACATGTACCG 123326 30 86.7 192 ..........................GTGG CCTGCGGCCATGAGGCTTGCGGACGCTGTCAGCTGATGGAGCGACGTTCGAAGACTGAGGCTCACAACGTTGAAGTAAAAACCAGTTATGCGAGCTGTTACAGCAGCCTTGCAAGCGTCGGCCTCTGCAAGCGTCATCCTTGTAAGCGTCCGGAACGAAGTTCCGCACTTCAGCGCACGTTCCTTGCGCTTC 123548 30 100.0 35 .............................. TTAATGAACCTCTCGATAACCGCGGAGACCGTCTC 123613 30 100.0 37 .............................. CCTGAAATGTGTCGATATCGTTCTCGACACATGCTTT 123680 30 100.0 39 .............................. ACGTAAAAATAACCAAGTTTATTATCACCATACTCATAA 123749 30 86.7 0 ..........................GTGG | ========== ====== ====== ====== ============================== ===================================================================================================================================================================================================================================================== ================== 15 30 96.7 63 GTTTGGAAAGAACCATAGTGGTATGGAAAC # Left flank : TTCACTTTGTAACACTCCTCCGTAATCGACTATTATTCTCATTCACAAACGTTAGTTCGCTTTCCGTATTGTCGGATCTCTGTTAAATTACGTTACGTTTGTTACCGTCAGATGTTAAACACTCGTTTTATACATCGTTAAATCGTACTATTTGCATTTTTATTAGTTGCTTTCAGAGCTTAATGCATTTGTCACAGACCTTCGTCGAATCAACCGTCCGGTAAAATTTTAGGCCTTTAGTTTCTATTCTTGCTCACCAACGCTATTTAGATAATTTCTAAAATTCTTAACAGAGATCCGACAAATCCTTGGTCATTTGACTGTCAACTCGTTTACATTCACAGGGTTTACGGTATCCCGCTTCAGATAAAGCACTTATACCTATAAATCCCCCCCGGATTAACTTTATAGAAATATTTGTCCCCTCAAACAGCAAAAATTCCCAAATTCCCTTGACTTAACGCATTGCTTTCCCTTATAATTTCCTTGTAATATATACT # Right flank : GCCTGCGGCCGGCTGCGCACGCTTCGCGTGGTTACGACTGGCTTCGCCAGTGTTGCGAACTCCTGCGGAGTTGTTTCGAACTGCTTCGCAGTTGTATCACGCCTACGGCGGATTAGATTATGTTTTTTCCGCCTCAGTGAGCTACCAACCGTGGCTTGGAAGATCCCTCACAGAGATTGTCATCCTGAACTTGATTCAGGATCTCGTAGTTAAGAGGCACAGATTCTGGATAGAAGATTTCCAGAATGACAGTGGCGGATTAAGATTCTGGATAGAAGATTTCCAGAATGACAGTGGCAGATAAGATTCTGGATAGAAGATTTCCAGAATGACAGGTATCCGTTGACTTCTAAAGAATGACAGTGTCTGAAGCTTTCAAGACGTAGTCAAGCACTTCAGCAGCGTAGCTGCTTTCCGCCGCAGGCGCACATCAACTGCGCAGCAGTTCGGGTCAACTCCGAAGGAGTTCGTGACAACTCTGAAAGAGTTCGGATCAATCC # Questionable array : NO Score: 3.48 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:-2.61, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGAAAGAACCATAGTGGTATGGAAAC # Alternate repeat : GTTTGGAAAGAACCATAGTGGTATGGGTGG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //