Array 1 7776-10052 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWTA01000027.1 Streptobacillus moniliformis strain AHL 370-4 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 7776 36 100.0 29 .................................... AATCAACTACTTCAATAAAATCAGTATCA 7841 36 100.0 29 .................................... CTATAGATTCAAATTTATCTATAGTACCT 7906 36 100.0 30 .................................... GAGAGTTTGTAAAGGAAGCTGCTAGACATA 7972 36 100.0 30 .................................... CTTGATATTTCTCTATATTTGTTTTGAGAT 8038 36 100.0 30 .................................... AGGAATTACCAAATTTCAAGTAAACAATAT 8104 36 100.0 30 .................................... TAATTTATTTTTTTTCATATATTACTCCTC 8170 36 100.0 30 .................................... TTTTAATTTACAGTTAATTATATCACATTC 8236 36 100.0 30 .................................... TTTCTACTATTAACTTAAGGGCTTTTGTTT 8302 36 100.0 30 .................................... ACGAAATTATGAGAATGCGAGAAGACAACG 8368 36 100.0 30 .................................... GGGATAATGATAATTATTATTATAGACCAC 8434 36 100.0 30 .................................... AGCAGGTTTGGGAGGCGCGACCGCACAACA 8500 36 100.0 30 .................................... ATATTTCAAAAGCTAAAGAATATATATCAG 8566 36 100.0 30 .................................... TTTTGTAAATAACTTATTTCACGAATTTAA 8632 36 100.0 30 .................................... AAACTACAACATAAGAGCACCAAAAGTTGA 8698 36 100.0 30 .................................... TTTCATTTTTTACTCTCCTTTAATTTCTAT 8764 36 100.0 30 .................................... AAAGATGAAAAGAAAGATACAAGTAAGAGA 8830 36 100.0 30 .................................... TTTTTTGAACTCCATAAAATATTATGGTTC 8896 36 100.0 30 .................................... TGAGTTTAATGTTCCCACAAAAGAGCAAAT 8962 36 100.0 30 .................................... AAATTAAGGCTGAATTTGAAGCAAAAGAAA 9028 36 100.0 30 .................................... GAGATATTTTTGGGCAAGCCTGGGGATCCA 9094 36 100.0 30 .................................... GAGATATTTTTGGGCAAGCCTGGGGATCCA 9160 36 100.0 29 .................................... GAATATTAAATTGTAAGCCATCAAAGGGA 9225 36 100.0 30 .................................... AGAAAGCATGGGCTACACAAGAAATAGCAA 9291 36 100.0 30 .................................... GGGAAGGCATTAATTTTAACTTCATCACTT 9357 36 100.0 30 .................................... GGAAATTGAAAATTAATGAAAAATGTGATA 9423 36 100.0 30 .................................... TAGTACTTAAAGTAATTGAGTTAATAAAAA 9489 36 100.0 30 .................................... TTTAAAATCGTGTAACAAGTTGTTAATGAA 9555 36 100.0 30 .................................... AAAAAAACAATTTAAGGAGAAAATGTATGT 9621 36 100.0 30 .................................... TAGATTTATTTAAAAGTGGTTGGAGTGATA 9687 36 100.0 30 .................................... AATTTAAAGAGGCATTTTACATTTTAGATG 9753 36 100.0 30 .................................... ATGATTTTGGCAAGAGCTTTTCAAATTCAA 9819 36 100.0 30 .................................... ATTGTAAAAAGTATATAAGGAAGTGAAACA 9885 36 100.0 30 .................................... ATAGTAACGGTAAAGAGGACTTAGAGACTC 9951 36 100.0 30 .................................... TTTTTTAAAAAAAAAGGCTTAAAAATCTGA 10017 36 77.8 0 .............AC.......A...G..T.TTG.. | ========== ====== ====== ====== ==================================== ============================== ================== 35 36 99.4 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : AAAAGTTATCTAAACTTTTTAGAAGAAGGTAATGAAATGCTGGCTATACCTGAAATAATAAAAATAGATTTTTATGACCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTACTTTGATTTGCCAGTATCAACTAAATTAGAAAGAAAACAAGCTCAGGATTTTAGAAAAAATTTGTTATCTGAAGGATTTATTATGATGCAATTTTCTTGCTATTCAAGATTTTGCAGAAATGATGCTGAATCTTCAAAATATTTTAATAGAGTAAAAAAATTGAGTAATAAATTAAGTGGTGGAGAAGTAAGAATTTTAAAAATTACTAACAAACAATATGAAAATATGTTAATATTAGTAAAAGAACCTAAATTATCTGAAATAAAGCTTTCAAAAAATCCATTGGTTATTTTTTAGTGTGAATTTTGTGCTAATGGATTGATTATTTAAATTTCAAACTGTATTTTCTAGCAATAAAATTATATTAATTTCATTGCTAGAG # Right flank : GTTGACTTTTTTAAATATTATGCTATAATAATTGTGTAGATAAGATTCACATTATTCAAGTTTACTACAGATTCTGTATTAAGATACAAAATCGTAAGACTGGCTGCCTTAAGCAGCTTTTTTTATTTTAAATAATTCTTAATTATGTCAAATTCTTTTTCTTTTCGGATTTTCTCTATTTTATTTTCTATTTCTTTTTCTGAATAAAGGTATACTTCATCAATAAAATTAATATATCTAGGTAACTCAACTAGTTTGTTATTATCAATAAATAATACTTTGTGTCCACTAGAAACTAATTCATATACTATATCTTCATTTTTCACAAAAAATATACATTTTGTATTGAAATCCTTTATTTTAGATAATATATATGATACTTTTTCAAAAAATTTATTCTTAGTATAAATACTATCAAAATCATCAATCAATAATACAGTGTTATCATTTACACTAATTAATCTATTTAAATATATTTCAAGTTGTATATTTACTTTTTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //