Array 1 15508-15836 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPIR01000032.1 Ruminococcus sp. YE71, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 15508 24 100.0 37 ........................ TATGTCGGCGTGTCATCCTGCAATATCCGACAGCTTA 15569 24 100.0 37 ........................ TCTTCATAAGAACTGTTGAGCGAGTTGACAATACTTA 15630 24 100.0 37 ........................ TTTTTTATCCCAGTCATTAAGCTCGCTCTGAGTCTTA 15691 24 100.0 37 ........................ TCTTCATAAGAACTGTTGAGCGAGTTGACAATACTTA 15752 24 100.0 37 ........................ TTTTTTATCCCAGTCATTAAGCTCGCTCTGAGTCTTA 15813 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ===================================== ================== 6 24 100.0 37 TCCCCGCACGGGCGGGGGTGATCC # Left flank : AATGAAAAACAATCCCCTGTATTTTCAAGCACTTCTTAGTCTTATCCCCGCACGGGCGGGGGTGATCCTACCATTGACATTATATTGTTTATTATTCATATCTTATCCCCGCACGGGCGGGGGTGATCCTAGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGGTATCGCTTA # Right flank : CTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGCTTATCCCCGCACGGGCGGGGGTGATCCTCTTTGCCGTTGTTTCCAAAGCTCCATACCAAACTTATCCCCGCACGGGCGGGGGTGATCCTTTTCTGTATAATTCTTGTTAAAACTTCTGCCGCTTATCCCCGCACGGGCGGGGGTGATCCCACTATCGATAACGAGCTGAAAGCCTTTATGTGCTTATCCCCGCACGGGCGGGGGTGATCCTAGTCTCGTCATCAAGAAAAATGCTTCTGCCCGCTTATCCCCGCACGGGCGGGGGGTGATCCTGTGCCGCTTGTCACTGAAAACCGCACTGCTTTCTTAAGCAATACCAAGTCGGCATTTGCTGTCAGTATTTTCATCGCAGATGATTTAACTTTGAACTTAAAATTTACATA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCCCGCACGGGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCCCCGCACACGCGGGGGTGATCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.90,-11.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [8.3-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 16017-16224 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPIR01000032.1 Ruminococcus sp. YE71, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 16017 24 100.0 37 ........................ TTTTCTGTATAATTCTTGTTAAAACTTCTGCCGCTTA 16078 24 100.0 37 ........................ CACTATCGATAACGAGCTGAAAGCCTTTATGTGCTTA 16139 24 100.0 37 ........................ TAGTCTCGTCATCAAGAAAAATGCTTCTGCCCGCTTA 16200 24 100.0 0 ........................ | G [16218] ========== ====== ====== ====== ======================== ===================================== ================== 4 24 100.0 37 TCCCCGCACGGGCGGGGGTGATCC # Left flank : GGGCGGGGGTGATCCTATGTCGGCGTGTCATCCTGCAATATCCGACAGCTTATCCCCGCACGGGCGGGGGTGATCCTCTTCATAAGAACTGTTGAGCGAGTTGACAATACTTATCCCCGCACGGGCGGGGGTGATCCTTTTTTATCCCAGTCATTAAGCTCGCTCTGAGTCTTATCCCCGCACGGGCGGGGGTGATCCTCTTCATAAGAACTGTTGAGCGAGTTGACAATACTTATCCCCGCACGGGCGGGGGTGATCCTTTTTTATCCCAGTCATTAAGCTCGCTCTGAGTCTTATCCCCGCACGGGCGGGGGTGATCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGCTTATCCCCGCACGGGCGGGGGTGATCCTCTTTGCCGTTGTTTCCAAAGCTCCATACCAAACTTA # Right flank : CTGTGCCGCTTGTCACTGAAAACCGCACTGCTTTCTTAAGCAATACCAAGTCGGCATTTGCTGTCAGTATTTTCATCGCAGATGATTTAACTTTGAACTTAAAATTTACATATTTACTCGCAGTTGTAAAATCATCAAAAATGATTACAGGCAAATCATCATAAATCCCGCTTTGCTCATTTGTATATCCAAGAATAAAATGATTTACCTGCTGTAAGTACTGGTGTATTATAGCTGCCAATATAATCTGTTGACTGCACAATGTACGGAGTTGGCTGTTCATAAGACAGCAATTCTCCTAATTCGTATTCTTTCCACATTATTATCCTTTGAAAGTCTCCTTTAAATAGTCAGCTAATAACTTATATTGCTGTTTTTGCTCTTCTGTCCAATCCCAACGATTATCAGCCATTTTCTTTAATACTTCGACCGCCGTATCATACTCTTGTTTAGAAATCGTCGCCCTACCTGTGCCGCCTAATGCTACACAAAGCGTTTTA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCCCGCACGGGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCCCCGCACACGCGGGGGTGATCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.10,-12.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //