Array 1 20510-21437 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVMJ01000032.1 Bacteroides sp. 519 scaffold32_size93520, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =================================== ================== 20510 35 100.0 33 ................................... ACATAGGGTTAAATGAATATATATAGTTTATAT 20578 35 100.0 34 ................................... TAATCCTGCAATAATCAGTACTATTTTTATATTT 20647 35 100.0 35 ................................... TTACTTTCATACACCATTAAGGCTTTCACGCCTTC 20717 35 100.0 33 ................................... TCTTGTCAGAAAGAATCATTGCCTTTCCATCTG 20785 35 100.0 32 ................................... ACATACATTGCATTTTTTGCGGTGTTTTTGTT 20852 35 100.0 34 ................................... TCCTCCAAAAACATTTTTGATACTGTTTCAAAAC 20921 35 100.0 33 ................................... TAGATTCAACATCTACAATCACTTCCTCAGTTT 20989 35 100.0 33 ................................... TGGACTTGGTTTGCAGTAATATTTCCCTATCTC 21057 35 100.0 35 ................................... GACGATGTAAATATCTCCACAATTATATCCCAGTA 21127 35 100.0 35 ................................... CTCCGAAGAGTCTGTTTGTAACTCCACTAAACGTT 21197 35 100.0 35 ................................... CTTAAAACCCATTGTCCTGCAAGTTTGTGGTTTGT 21267 35 100.0 32 ................................... TCTAACGCTATTTCTTCTTTGAATTCCATATT 21334 35 100.0 34 ................................... GCTAACGTTCTCTTAAAATAAGCGTTGTTGTTTT 21403 35 97.1 0 ..........A........................ | ========== ====== ====== ====== =================================== =================================== ================== 14 35 99.8 34 GAATGTTGTTGTGACTGCGTAAGCGGTATTGAGAC # Left flank : AAGAACAAAAGAACATATAGCCTGAATTATTCATGTTTTTTGTTGTAGGCTAAAAACATTTGCGAAAAACGTGTTTTTGGGATGTATTTGATTATGAGGCAATTATTGAAAACAGGAGAAATTCTTTCGCGAAAAAAAGTTCGCAAGAGGTTTGTTTTATAGGTTTTGAAAAATCTCTTGCGAAAATTAACAAACGTTTGCTAAATGTCCTTTGGTTTAATGTATTGATTATTAAAGCTTTGCGTAAATAGTGAAAAGCCTGTTTTTCGAAAGTGACAGGTGTTACTGCTCTGGCATTGAGCTTTGCGAAAAAAATCTTATTTGTATGCGGTTGATTACCAGATAAATAATGTGTTTGCGACGAATAAAGGGCTTGTTTTATAAGAAAAAATATAGTAGATTTGCGAAAATAACAACAGTAATCTAAATGAGACTGGTATACAGGTGGTTATGAAAGGATTGGAAAATAGTGGTTTTGTTAAGTTGTTGATAATGAGACA # Right flank : CATAGTTAACAAAATAATAAACCATAACGATTAATATACATGTAACCATCAAGTTTGATTACATTACTATCGGTTCAACCAGAAGGTAGAGACGCAATGCATTGCGTCTATTATCAGAATTATCTGGCAAGGTTATAATCCCACAATGTTAACAGACGCAATGCATTGCGTCTCTACTTTTAAAAATCCCCATCTTCGGGCCGTAGGCCCAGCTCAATTCAGCCCAACGCAACGCGTTGGGTAAGATAACCACCTTATACACAGCGCGTCCTGAAAGGACAGCTCAATAAAAATTATACTATTAATACAACAACCTTTTTGCAATCCCCTACAGAAGATTTATCGCAAAAAAACCATCATAACTATCATAACGTACTTATCGAACTGTATTTCAATATATTACATTATGACAGATGCCCAAAAAGTAAAACATAAGTACCATTCGAAGTATCATAGAACAAAAACAGTTTCATTATAACTTGATCTAAAAAAACAAGTAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATGTTGTTGTGACTGCGTAAGCGGTATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.40,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 545007-532747 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVMJ01000001.1 Bacteroides sp. 519 scaffold1_size564214, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================== ================== 545006 29 100.0 36 ............................. AAGTTTGAAAAACCAAAAGACTTCGAAATTGATAAA 544941 29 100.0 35 ............................. TAGTGTAACCCAAGCAATTGAAGAAATGAAATCCT 544877 29 100.0 34 ............................. TTTTGATTTGAATAGATACCCCACATATAACTTG 544814 29 100.0 37 ............................. ACAAATCAGGCGCAGCAGCTATTAAGGAAGCGTATTT 544748 29 100.0 36 ............................. GTTAGATCGAACATTTTTCTAATTTGATGGCGGGTT 544683 29 100.0 37 ............................. AGATTTCACAATCTTAGAGCCAGCGCGAAGCTCGACA 544617 29 100.0 35 ............................. ATGAAAGGCAACTCAAACAATATAAAGATACTAGG 544553 29 100.0 35 ............................. AAGAAACGCTTTCTACTGGTATATGCTCCATAATC 544489 29 100.0 37 ............................. ATTTTTTAAGCATTATCTCAATTTGCTGTATGTCAGT 544423 29 100.0 36 ............................. TACTTCTTTCCCTAGACCGCATAAAGCCCAAGCATC 544358 29 100.0 37 ............................. GAATTTCGGACAAAGATTTGAAAGACAAGTACTCTAT 544292 29 100.0 36 ............................. AGCTTTTTTTGAATACTGACCGAGTGCGCGATAGAG 544227 29 100.0 36 ............................. TTCTTATATACTTTTAGAATTTACGCAAAGGTACAA 544162 29 100.0 36 ............................. CTATGTCAGCCAGTGAAACCGCAGCATCCTCATATT 544097 29 100.0 36 ............................. TCAAAAGGTTACCCCCATGCGGGTAGGGCTTCGCCC 544032 29 100.0 36 ............................. TTTAACGAAAATTACACGCATGATGTTCCGGTAAAG 543967 29 100.0 35 ............................. GATGGAGATAAAGCGTCGTTCTCGGTTAATTTTGA 543903 29 100.0 37 ............................. TTCCGAAGTGCATCGAATTAGATTCAGCCATTCAAAA 543837 29 100.0 34 ............................. TGGGATGAAACAAAGGGAAAGTCTACCGAATCAG 543774 29 100.0 36 ............................. ACATATTCAAATTCGGAACTTCTGTTTGACACTACT 543709 29 100.0 36 ............................. ATACTTAAAGATTATTTGCAAAGAAATAGGTTTAAA 543644 29 100.0 34 ............................. GAACATTCGTTATATTTAGACCAGCAGCAATGAA 543581 29 100.0 36 ............................. ATCAGAAGCTATTTCACTGAATACACCTGCCTTAGA 543516 29 100.0 37 ............................. TCATGTAATCAGCAAAATAATTATTCCATGCAGTTGC 543450 29 100.0 35 ............................. TAATTATTATGCGGTTGGGTCGACCCAGCCTCCGT 543386 29 100.0 36 ............................. TTCTCAACTTATTTGTTAAGTTGGTGATTAATTCGG 543321 29 100.0 35 ............................. ATCGATCCCGGTACATTGAACGCTGCGCCGAGCTC 543257 29 100.0 36 ............................. TCCGGACTTCATAAGAATACGCGTTTCTTTGTTTTT 543192 29 100.0 36 ............................. ATCTCTTCATCTATCACAGAATCCCGAATCGTTTCA 543127 29 100.0 34 ............................. ATCTTCATTAAATAGGTCATCAAACGATTCATTA 543064 29 100.0 36 ............................. GGTTTATCTAGGATGAAACAGGAAGTAATAACAATA 542999 29 100.0 37 ............................. AGTTATTTCGTACGATATTTTAGAAGGAGACATAACC 542933 29 100.0 37 ............................. TGTTGCAAAGTTAACCATTTGAAAGACGGTTCACATA 542867 29 100.0 37 ............................. ACGGAAACATTTACTGAAACGTATGTATTTGATCCCG 542801 29 100.0 36 ............................. ACTGTTGAAAATCGGTTAATAATTCATAAAAATGCA 542736 29 100.0 35 ............................. TTCAAGAACGCTTTCTACAAGAGAAAGCTCTTTTA 542672 29 100.0 36 ............................. CGAAAACACCTAGAAACGATACCTAACTGTCTGAAT 542607 29 100.0 36 ............................. TCCGTTTACCTTTAGACAGCCCGAATAGGCTAATCG 542542 29 100.0 36 ............................. ATCGAGATTAAGACACCGCATAACTAAAATAAATCA 542477 29 100.0 34 ............................. TATTTTTCTTGTTTGCGGTAAAATTCTCCTATTC 542414 29 100.0 37 ............................. ATTCGAGCACACTCTCAATTAGAGGCAGTTCCTTTAA 542348 29 100.0 37 ............................. TGGATATATTGAATTTTAAATGCCATACCGCTAGGGT 542282 29 100.0 37 ............................. ATGAGATAGAAGATGGATTAACCGAAGAAGAATATAT 542216 29 100.0 35 ............................. AATGAAATTTAGAGTTCCAGAGCCATAATCTACTT 542152 29 100.0 36 ............................. TTTGATGCCTTTATACACGAAACTCACTTTATCAGA 542087 29 100.0 34 ............................. TACTATATCCTTTTTTTAAGTATTTAGCAGAATA 542024 29 100.0 37 ............................. GATTTCCTGTCTTTTCATCTTTAGCAATCGAATTTTC 541958 29 100.0 36 ............................. AGTATAAGATGTAAGTAACTGTTTTGAGATAAAGAA 541893 29 100.0 36 ............................. AGGATTATCTCAAAAGAGTAAACGTCATTGCTCAAA 541828 29 100.0 34 ............................. GAAAGATTCCGGTTGGATATGAGACTCAGAAAGT 541765 29 100.0 36 ............................. ACCTACAGCAATACATCGACGCCCTATCAGGTTCGT 541700 29 100.0 36 ............................. TACTATGAATTTAGTGATGATTATACACAGATCTGG 541635 29 100.0 37 ............................. AAACAACCAGCTCTAATGTAAAAGTATGAACCCAAGA 541569 29 100.0 35 ............................. ACGTCAAGAAGTTACCCCTATGCAGGTAGGGCTTC 541505 29 96.6 34 ............................T AATTGCACCTGAAAATGGATATGTATGATGCTAT 541442 29 100.0 37 ............................. TACTTAGCTTCAACTTACCTGCATTTCCCCAAGATTC 541376 29 100.0 36 ............................. TGTTTAGTTTTTACACCTTTTTGATATGCGATTACA 541311 29 100.0 36 ............................. AAGAAACAGATTCTTCTTCTCCATCTGCATCTTCAT 541246 29 100.0 36 ............................. ATTGGAGTGATAGCGATGAACCTAAGTATTTCCCTT 541181 29 100.0 37 ............................. TCAGGAGTGTATGAGGGTAAAATGTGGAAGTCGTATA 541115 29 100.0 36 ............................. GATAGTCGAACCTAACGAATCAAACACTTCCTGTGT 541050 29 100.0 36 ............................. CTGGCAAAAATGCTCTCGGCTACACAAAACTGCGCT 540985 29 100.0 36 ............................. TAGATGCAACTTCTTTAGGTAGGAACACATTTGACT 540920 29 100.0 36 ............................. AAAAGTAGAAGCATATTCAAGAATGGTAGACTCGGA 540855 29 100.0 37 ............................. GATGAATGAAAAGCTTGGTGAGTATGTTGTGCGTCGT 540789 29 100.0 35 ............................. AAGCCAATCCGATGACTTATGCCAGACTGGATAGT 540725 29 100.0 38 ............................. GACAGGATCCTTCCGTATTTGCCCGCACATTAGGACAT 540658 29 100.0 34 ............................. TACCTACCTGTAGGAACCGGGTGTGTGATGCTAT 540595 29 100.0 36 ............................. TTCGAGCACGCTTTCAATTAGAGACAATTCCTTTAA 540530 29 100.0 34 ............................. TAGTTTTTGAAGATAGAGTAATATTGAATACTAC 540467 29 100.0 37 ............................. ATAAAGGAAATATCTCAAAAACTTTGTCCTCGTGATT 540401 29 100.0 37 ............................. TGATTTATTCCTTTCTCATTCAATTTTATTCAGTTTT 540335 29 100.0 36 ............................. AAGCAACAATGTCAATATCTGATGTTGAACTTGGTT 540270 29 100.0 36 ............................. ACTGTCAAATGGCTCATTTTTGAAACAAATATTATT 540205 29 100.0 37 ............................. GTCAGTCAACCATCGAACAAAACCTGCGTTCAAATCC 540139 29 100.0 36 ............................. GTAGTAAGGTTGGAATAAGTTTGGAGGATGAGTGCA 540074 29 100.0 36 ............................. GCAATTGTTCCTATTGCTGTAGGGTAATAGTATAGA 540009 29 100.0 38 ............................. TTAGGTCTTCTTTGTTATCGAAATACAAACGTCCTTCA 539942 29 100.0 36 ............................. TTTATTATCTCCAACCAGTAAACTACTCATTTCCTC 539877 29 100.0 36 ............................. GCGGTTTCTGGAAAACACAAGCAACTTCACGTGGCG 539812 29 100.0 37 ............................. CTAACCTTAATATAACGTCCTTCTACCCCTCTTCTAT 539746 29 100.0 36 ............................. AAAATAATATTTAAGTTTGCAACGTTCAACGTATTA 539681 29 100.0 35 ............................. TTGAGACCATCCAGCAACATCGCATCTTCATCACC 539617 29 100.0 34 ............................. TAGATTACCTGGTCAAGAAATTCAATATCATTAT 539554 28 96.6 36 .......................-..... AAAGATTAATAGACGTCTCCAAGCTGCAACAAGCAG 539490 29 100.0 36 ............................. CTTTTCCTTTGTCTCTGTGCATATTTTCCCACCCCG 539425 29 100.0 37 ............................. TCGACAGGGTCGAAGATGTTGGATACGAGAATATCTC 539359 29 100.0 36 ............................. GTTGTATTTCACAAACCTTTCCTGTTCCGGAAATTC 539294 29 100.0 36 ............................. ATTGTAGTACATTCTTTTTTGTCATAATTCAATATT 539229 29 100.0 35 ............................. AACTTTCAGCCGATCAGGTAGAACAAGTAAATAGT 539165 29 100.0 36 ............................. ACGGAAACTCCTTTTGACTATTAACCGCCGTAAACG 539100 29 100.0 36 ............................. GGCAAAATGCGCAAATACTATCGTCTTTCGGTATTG 539035 29 100.0 35 ............................. TTAACTGTACAATTTCACGTATAAGTTCAACTTTA 538971 29 100.0 35 ............................. TATATGAAAGAATGTCGGCACACATGAGCCTTCAG 538907 29 100.0 36 ............................. GGAGAAAGTCTTGTAACTTCTTTGTCTACAAGAGAA 538842 29 100.0 34 ............................. ATGCATGGATAGACCGGCAGAATATTCTGGACCC 538779 29 100.0 36 ............................. TTACATTCCTCCTTCCTTCATCAATCTCGGATTACT 538714 29 100.0 35 ............................. TACTATGGGTTACGTTCTACAAAAAGTGATGGAGG 538650 29 100.0 36 ............................. ACGTCAAATAATCACGCAATATTTAATTACGCGAAC 538585 29 100.0 36 ............................. GCGTAACGAAGACGTAGACACGGTAACGCCGTAAGC 538520 29 100.0 36 ............................. GTACCTATATAATAATGTTAAGCGCGTTACAGCGGT 538455 29 100.0 36 ............................. GGCGGTAATAGGCTTTCTGCTTTTTCATAATAATTT 538390 29 100.0 36 ............................. AAAACAGCGCGAAGACGCCGTTAAGAACGTCGAAAA 538325 29 100.0 37 ............................. AGAAAACATTAAGCTGATGATATTTAGTAAGGACAAA 538259 29 100.0 37 ............................. TTAATTTCTATGATATATTCTTCCATCTCTTTTTTGT 538193 29 100.0 36 ............................. TTAGCAGGCGATCCTAAAGGTTTCTCTACAACATAT 538128 29 100.0 36 ............................. AACTTTTCGTGTAGAAAAGTTTGGTAACATTAAACT 538063 29 100.0 37 ............................. ACTATGAGAAAGTGTATGTGTACTTACAGGCAAAAGA 537997 29 100.0 36 ............................. ATCTTATTAAGATAGTATTCTAAAAGCTGCACTTCT 537932 29 100.0 35 ............................. ACCGCATGGAGAATAAAGAAAAGCGGAGTTATAGA 537868 29 100.0 37 ............................. TCAGTACACATTGCTAGAATTCTAGCACAACAGTATG 537802 29 100.0 35 ............................. TTCTACACAAAAATGTTTGATATTGGTGTACAATG 537738 29 100.0 36 ............................. TGGCAATAGTAGACAGTTTTATTTGCCCGGTTAAAA 537673 29 100.0 35 ............................. ATCATTATACCGAGTTCTGGTGTTGCTAACATAAT 537609 29 100.0 36 ............................. AGTTGTTCAGGACGCCGGCAGCACGAACACCATCCA 537544 29 100.0 36 ............................. ACTTTGGCATACAACAGGGTAGGGAACGATTATATT 537479 29 100.0 36 ............................. TTGGAAAAACATTCACTGCCGAGTACCTGAGCCGAA 537414 29 100.0 36 ............................. TATCTTTCTATTTTAAATCATCTGGACTTTTAATTT 537349 29 100.0 35 ............................. CCCCTATTCATATCAGCTACTTCCATTCCTGCAAA 537285 29 100.0 36 ............................. TATTTCAATATATTTCTACTGATAAATACAGGAATA 537220 29 100.0 36 ............................. ACTTAGCGATGATGAAATAAAAGACATTATTGATGA 537155 29 100.0 36 ............................. ATCTCTGATGGATATTACACATTAGAAACAGCCATC 537090 29 100.0 36 ............................. TCACTTGCAATGTACGTCTACCAGCATATTTATTGC 537025 29 100.0 62 ............................. CACCATGAATAACCCTTATGCGTAGAACTGAATAACCCTTATGCGTAGAACCGTTACGGCAT 536934 29 100.0 36 ............................. AATGATGTATAGTACACTGCCATTAAAGGCAGTGAT 536869 29 100.0 37 ............................. ATCGAAGAATCAGCAGAAAGGAGCTGGATAAGACATG 536803 29 100.0 35 ............................. CAATTATTTTGATGGTAGAATAACAATTCGGGATA 536739 29 100.0 35 ............................. CTCAAAAACAGGCACAAATGGACTTTCTGAATCAT 536675 29 100.0 35 ............................. AAGAAAGGAAATATAAATGAGATCAATTCTAAAAA 536611 29 100.0 36 ............................. AAGAGTGAAAACCAATTTAGAGTTAAATGTTCTTTT 536546 29 100.0 36 ............................. TCAGGAAGGCAATATGTTCCAGTATGTGCGTATTGA 536481 29 100.0 38 ............................. AAGAGTGAAAACCAATTTAGAGTTAAATGCTCTTTTTC 536414 29 100.0 35 ............................. TTGTTTGTCCTTCGTGAAATGGAATAATCTGTTTC 536350 29 100.0 35 ............................. ATTGGAGTTATTGTTGGATTAGTTGCTGCTTTGAT 536286 29 100.0 34 ............................. AGTATTCCTGGCACAAATACTAGTGGATTAGGTG 536223 29 100.0 37 ............................. CATTGCGCCTTACAATCGTATTTTTTCCGGATATGGA 536157 29 100.0 36 ............................. GAAGTTTTTGTGCTTTGTAATAAAATCGTTCTTCCC 536092 29 100.0 36 ............................. CGCAAATCAGGTAGTTTAAAGTTTGATGTTCCATTT 536027 29 100.0 34 ............................. TTGATAAATCAATGAATTACCATCTGCGTTCTTT 535964 29 100.0 37 ............................. TCGGACGAAGGCGCAATCAGGTTGTATAATGAAAATC 535898 29 100.0 36 ............................. ATTCAAGATGCAATTAGAGTGTATTTGTCAAATTTA 535833 29 100.0 37 ............................. GAAATCAGCACGAAGGAAAGAACTGTCATTGGTTGTT 535767 29 100.0 36 ............................. AAGTAGAACAACTGCAAAAGCATCTTGAAATTGATT 535702 29 100.0 37 ............................. ATACTTATGAATTACAAAGCAATTATTACATTTAATT 535636 29 100.0 36 ............................. AGATAAACCTACATTATTTCCCGAAGCCTTATGGAA 535571 29 100.0 35 ............................. TTGAGAAAATATTATTGGAAGGTAAACTATCTGCA 535507 29 100.0 36 ............................. TCAGAATATTCATGTAGTTTTAATCCGGTAACTGGG 535442 29 100.0 35 ............................. TCAGAGATCGGATAAAGAGTATTTATGTTAATAAC 535378 29 100.0 36 ............................. AATGAGGATCAATTTAGACAAACATGGCTTTCTTTC 535313 29 100.0 36 ............................. TTGTGTCTGATGACAATGGAAAGTTATCTTTTGCTG 535248 29 100.0 36 ............................. CTCCAAAGGCTGTAAGTGTTTTACTAGTTTGTAGGA 535183 29 100.0 37 ............................. CTTCTTCCGAGTAGGAATACTTTTCTTTGACAATTTT 535117 29 100.0 36 ............................. TGTTGGAAACATTGACTCAAATAATTCTTTAGGTGA 535052 29 100.0 37 ............................. AGAAGGGTTGCGCATCTAATTTTAGGTTTGCGAACGG 534986 29 100.0 36 ............................. CCCCTAGGGGGGTGGGGTGGCGATTATTAACGCAAC 534921 29 100.0 36 ............................. TCCATCCTGTCCGACCATAAAAAAGAGCCGGATCAA 534856 29 100.0 37 ............................. TGATCTTCTAAGTAAATAATAAAATCATCTAAGAAAT 534790 29 100.0 36 ............................. ATATGTGGAATAAAAAAGAATATAGGTGAGTTCTAT 534725 29 100.0 36 ............................. TTCAGTAACGACTCCAGGAATAGTAGAAGAAATGGT 534660 29 100.0 36 ............................. AATTAGATGACACACCTGAAAATCATCCAGAGCCTA 534595 29 100.0 37 ............................. TTCCTATGTAGGCAGGATTTGAACGCAGGTTTTGTTC 534529 29 100.0 37 ............................. TCCGTTGCAGATGCAAAGCAACTTCGGCTTCAAAAGC 534463 29 100.0 36 ............................. AACTCTCAATATTATTGTATTTCAATACCAGGTCTA 534398 29 100.0 36 ............................. GAAGGAGATAAACAGAGCTATACATATTAATTTTCC 534333 29 100.0 35 ............................. TTTTCCATTATCGTTAATGTAGTATACTCTGTCCA 534269 29 100.0 37 ............................. CCTCCAGTGGGAAGCTTGTTTGTGAGATCCTTAACAA 534203 29 100.0 35 ............................. CGGAGAAACCTTTTTTAGTAAATTGTTTGGTGATG 534139 29 100.0 36 ............................. TACTAAAAAGTCAAACAATGATCAAAATGAGAACTC 534074 29 100.0 36 ............................. GGCAGGAGCGATTTCAGTACATACTGGAACTTGGGT 534009 29 100.0 36 ............................. TAATGATGGAAGGAGGTCAAGCATGAGTAAGCCAAT 533944 29 100.0 35 ............................. AGCTTCAGCAAGAACTAAAAAAATATTTAGGCTGC 533880 29 100.0 37 ............................. GTCATACGACATATCATAATTGTTGAGTTCAATCAGT 533814 29 100.0 37 ............................. TTGTTCGGGCATAAATCCGGAAAGCAATCCCGGACAC 533748 29 100.0 34 ............................. TCGTTATGTATGCGGGTAATCAGGAAAATAAGAT 533685 29 100.0 36 ............................. TTTTTCTTTCGTTTCAGTGCATATTTTCCCTCCTTT 533620 29 100.0 34 ............................. TCGTTATGTATGCGGGTAATCAGGAAAATAAGAT 533557 29 100.0 36 ............................. TTTTTCTTTCGTTTCAGTGCATATTTTCCCTCCTTT 533492 29 100.0 36 ............................. TTTCAAGATGTTCAATATCTGTGTCATTTCCATAGA 533427 29 100.0 36 ............................. TTGGATTAAAGAAGAGATGAAGGTAAAGTACTATTT 533362 29 100.0 36 ............................. TTTTTGGAAAATTTCTTTTACACAATCGTGCATAGG 533297 29 100.0 36 ............................. AAGATATATTTCGTTTCTGAAGATAGGATAACGCAT 533232 29 100.0 35 ............................. TCTGTTACGACTTCAAAAACATTTCCTTCATTGTT 533168 29 100.0 36 ............................. CTCCCTACATGAATAAATGATTTAGCTACTCCAATA 533103 29 100.0 37 ............................. ACTTCTACGAATACGGTTCCTGTTACTTTTAATTCCA 533037 29 100.0 35 ............................. TTCGATAGCGAGAAGGCAGATCGTGGTACAGCGTT 532973 29 100.0 37 ............................. ATCGCAGAGGAAATAGCAGAAAAATATGATTATAACT 532907 29 100.0 37 ............................. TTCTTCATTCTTGGTAAACATTTCTTCAATTTCTATA 532841 29 100.0 37 ............................. GAGGTTATATATGTACAAGTAGCATTCACGCCGGAAA 532775 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ============================================================== ================== 189 29 100.0 36 GTCTTAATCGAACTGTATAGAATTGAAAC # Left flank : TTAAAATGTATTGGTAATTATGTATGTTGTTCTAGTGTATGATTTTGGAGAGAAACGAGTTGTCAAGATGCTCAAATTATGTCGCAAGTATCTTAACTGGATACAAAATTCAGTGTTTGAGGGAGAGATTTCAGAGGTTCGTTTGAAAGAATTAGTATCTTTGGCAAAGAATTTTATGGAAGAAGATGAGGATAGTATCATTATCTTCAAAGGGCATCAGCAAAATTGGATCGACAAGGAAATTGTTGGAAGAGAACGAAGCAATATTGATATTTTCCTATAAACTGTGTTTGTCGGTCCATGTTATAAGATTGAATGAGGAATGTCGTGGGTTATCAAAGTGATCTTTGACGTATTGATTTTCAATTTGTTAGATATCATGTCGATCTCCCAGGGATTTCTTACTTTTATAGGTCGACAGAATTTTTATGTAAAAACATGGCTTTGTATTGTTGTTTTGTAACTGATTATCAATGTGAAAGGGGTTGAAAAGTTGAGGG # Right flank : TTTTGAGGTTCCTATTCACTTTCAGTACTTTTTTTCAATGTAAAAGCTAGTTTTTTATCTAATCAAGTAACAATAAAATCAAAAAAAATAGTACCGTAAGCGAATAAGAACCTCAAAAAGGATGTAATCTATAGGGAATTCCCTATTAATAATTAGGAAAAAAACAAGTAAAAAGGGAAACACTCTTCTTATTTTTGTAATTAGCTAGACAACTTTAAAATAGTACAACCATGAAGAAGATATTATCTCTATTTATCATTGCAACTTTATCAACCAGCATCTATGCTCAGCGAAAGGATCTCACTCCTCGTGTTGACATTGAAGGAGTTTTGAAAATCAGCTACAATGATTTCCCAAAAGGAACTCCAATATTGGTTATGAATGTTATTAAACTGTCAAGTGATGTACAATTGGCAGTGTCTATCAACAATACTCAAATTTCTATTCCATCCAATCAAGCTAAAAAGATAGTTGAACTACACCCTAAAACGATGGAGCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCGAACTGTATAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //