Array 1 42967-45557 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNBI01000010.1 Sphingomonas carotinifaciens strain L9-754, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 42967 29 100.0 31 ............................. GAACGAAGCGGCTGCGGAAGCCGATCAAGGC T [42995] 43028 29 100.0 32 ............................. TGTGGGGCGGGATCGCGGCGGCGGTGGAGCGC 43089 29 100.0 32 ............................. GTCCGTCATGGAAGCGGACCGCGATCGGCGGC 43150 29 100.0 32 ............................. TGTGGGGCGGGATCGCGGCGGCGGTGGAGCGC 43211 29 100.0 32 ............................. GTCCGTCATGGAAGCGGACCGCGATCGGCGGC 43272 29 100.0 32 ............................. CTCCCCGAGGGAACCGTCCTCCGGGTGCGCGG 43333 29 100.0 32 ............................. CTCCGGGGACCAAAATTGGAACCCGCCGATCT 43394 29 100.0 32 ............................. CAGGTGAGCATGGACGTTCCCGCCCGGTTGCC 43455 29 100.0 32 ............................. GGAGATAGGACCATGACCGCAACCGCCCCCGC 43516 29 100.0 32 ............................. ACGATTCCGGGGTTCTCATTGACGAGGGTGAC 43577 29 100.0 32 ............................. TCCGCATCCAGGGCATCGAGCAGGATTTGCGT 43638 29 100.0 32 ............................. GCGTCTTTCAGCGTATATGCCCACGCCTTGAC 43699 29 100.0 32 ............................. TCGAATGCCATAGCATCATTCGGCAAATTATC 43760 29 100.0 32 ............................. GCCTTTGCGGCGGGTTCGATGGCGCTGACCAA 43821 29 100.0 32 ............................. TCGAAGCGCGCTGCGGGAGGGAGGCGATCGAG 43882 29 100.0 32 ............................. TCCTGCGCCCTAGTAACCCTGCGAACTCCGCG 43943 29 100.0 32 ............................. TCGACCTCGAACATGCGACGGTGAGGCAGCTT 44004 29 100.0 32 ............................. AACGTTGACGAGCCCAAGGCATGGGGGAACGT 44065 29 100.0 32 ............................. AACGTAAGAGGTACGAACGCGTGCGCCATCCT 44126 29 100.0 30 ............................. GACCGACCCCAAAGCGCGCTTCGGCATTGC CC [44151] 44187 29 100.0 32 ............................. GTCGTTGTAAGCCTTCTGAAAAATCGACACGG 44248 29 100.0 32 ............................. CACTGATGAAACTGGACTCAAAGAAATTCTGG 44309 29 100.0 31 ............................. GATTTCCAACTCGTGGATCATCTACGGCAAG G [44336] 44370 29 100.0 32 ............................. TCATCCTGCGCCACGATGCCGCGCTGATGCCG 44431 29 100.0 32 ............................. CGAGGATTTGACGGCCCTTGGTGGTGCAGCCG 44492 29 100.0 32 ............................. TTCGTTCCTGTTAGGGTGAGCCATGGCTGAGA 44553 29 100.0 32 ............................. CGGGACAAGCCTTTTGCCGCCGCCGACGAGCC 44614 29 100.0 32 ............................. GGGTCCTCACCGAACGCCAGCAGGACGCCGCA 44675 29 100.0 32 ............................. CTGGGCGACGGCTTCACGGTCCAGACCAACGC 44736 29 100.0 32 ............................. GTGTCGGGCCAAGAACGCGTGCATGTCTTCAA 44797 29 100.0 32 ............................. ACGATCCTGAGACCGGCGAGGCGAAGCCGGTC 44858 29 96.6 32 ............................T TGCCCTAATGCATCGTCATCGCGGATGACACG 44919 29 100.0 32 ............................. TCATGTCCGCCGGGCATAGGCTGGCATCACTG 44980 29 100.0 31 ............................. GGCGGCGCAACTGCCCGGTCGCGAGGTTGAG T [45008] 45041 29 100.0 31 ............................. TTCCGCAAGGAGCTGACGCCGCGCCTCCAGG C [45066] 45102 29 100.0 32 ............................. TCGTATGTCGGCGTCATCGGCGAAGTCACGCT 45163 29 100.0 31 ............................. GCCCCACATTGCGAACAGGGCGCCCCTTGGC A [45191] 45224 29 100.0 31 ............................. GAGACGAACACCTTGGCGACGGCGGCAAATA C [45250] 45285 29 100.0 32 ............................. CACATCTCACCCTTCACCGGGGCGCCCTGGCC 45346 29 100.0 32 ............................. CCAACGCGCCGACCGCGCCCGCGCAGCGCGCC 45407 29 100.0 32 ............................. CGGTTCCATGCCGTGAGGCAATGCGCGATTTA 45468 29 100.0 32 ............................. TCATATGCGGTCTGCCAACCATTCGGGCGGCG 45529 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 43 29 99.9 32 GGCTCCCCCGCACCCGCGGGGATCGACCC # Left flank : CGCTGATCCCCGGCATGATCGACCGGATCAAGACGCTGCTGATGCCGGGCGGCGTGCCGGCCGAGGCTGCACCGCCGGACGCCGGCGACGGCGGAGCGGTGACGCTGGACCGGGAGGCGGGGTGATGCCGCTGACCGTGATCATCACCCGCGACGTGGAGGATCGCTATCGTGGCTTCCTGGGCTCGGCGATGCTCGAACTGGCGCCCGGCGTCTACGCGCAACCGCGGATGAGCGCGGGCGTGCGCGGGCGCATCTGGACCGTGGTGGAGGAATGGCACGGCCGCCTGCGCCGCGGCAGCATCGTGATGTGCTGGGCCGAAGCGGGTGCGGCAGGCGGCCTGGGCCTGGCAACGCTGGGCGAGCCGCCGAAGGACGTCGTGGCGCATGACGGCATCCTGCTGGTACGCCGGGCACTACCCTCGCGCGGAGTAATTGTGGGGGAGGGCTGAGCGCGGTTTCTTTGACATTGTGAACGAAAACAGCGATCTGACTGGCAGA # Right flank : CAAGAGGTGAGCGATCTGATCGACCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACCCGCGGGGATCGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 46613-46884 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNBI01000010.1 Sphingomonas carotinifaciens strain L9-754, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 46613 29 100.0 32 ............................. TGCCATTTCGGCATTTTGCCTCTTGTGGGAAA 46674 29 100.0 32 ............................. ATTATCACGACGTTCAATGCATCGACCGACAT 46735 29 100.0 32 ............................. CTTCGGTCTCAGGAAGGAGGACGAAGCATGAT 46796 29 100.0 31 ............................. TCACTAGCCCCAGCCAAGAGACGATCGCACC 46856 29 72.4 0 ....T..........CT...CG.T..GG. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 94.5 32 GGCTCCCCCGCACCCGCGGGGATCGACCC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAC # Right flank : CACAACAGTTTTGAACCCACACCTCCAAATCCATACGCCACTTACGGATAGCTCCCCGCCCCACCCGCTGCTACAACAGCAATCGTCACCGCTATCGCCCCCAAGCCACGACGCCCGCATCCATCCGCCACCCGATCCCCACCACCTTTTGCCGCGGCTCCTTCACCCAACAACCCGAGAATGGTCATGTCAGCGATCCAGCGTCTTCTTTCGATCATGGTTCGGCTGCGTGATCCGGAGGCGGGGTGCGAGTGGGACAAGGTGCAGACGTTTGCGAGCATCGCGCCGTACACCATCGAGGAGGCGCATGAGGTGGCCGATGCGATCGGGCGCGGGGACATGGACGAGTTGAGGGAGGAGCTCGGCGACCTGTTGCTGCAGGTCGTGTTCCATGCCCAAATCGCCAAGGATATCGGGGCCTTCGACTTCGACGACGTGGTCGCCGCGATCAGCGACAAGATGGAGCGGCGCCACCCGCACATCTTCGGCGATGTCGCAGA # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACCCGCGGGGATCGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA //