Array 1 4899-6118 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSVJ01000021.1 Coprobacillus cateniformis strain OM02-34 OM02-34.Scaf21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 4899 30 100.0 35 .............................. ATAGGTGAAATGAGTATGACAGAATTTAAAAACGA 4964 30 100.0 36 .............................. TAATAAATTGAAACTGGAGACCACTTATCACCAGAT 5030 30 100.0 37 .............................. ACCATTCAGCCAGTTTTGCAATTGCTGCAGATTTTTC 5097 30 100.0 36 .............................. TTATAGCCGAATTTTCCACTGTCGCTTTTATTACAG 5163 30 100.0 36 .............................. CACAACATCAAAAGAACACTTAATTGAAATTGAAGA 5229 30 100.0 36 .............................. AACAATACTTTAAAACTTGTAAGAGTACAGAATAAA 5295 30 100.0 37 .............................. TCGGATTCAATTCATATTCATTTTCAAAAATATAAAA 5362 30 100.0 36 .............................. AAATACTACTGTTGCTAATGTTGTACGTAATTTATT 5428 30 100.0 36 .............................. TTATAAATTTTAGGACATATATTTGTATAAGTTTTT 5494 30 100.0 36 .............................. TGCATAATCAACGCCACTCAAGAAAGGAAACAAGAA 5560 30 100.0 36 .............................. TCATGTGTTAATAGATATTGGCCTATTTTCTTAGCG 5626 30 100.0 35 .............................. ACATAATTGACCAACTAGGTGGAGAGTTTGAGGAT 5691 30 100.0 38 .............................. ACACATGGGCTAAGAACATTAGTTTCCCAACACGTAAA 5759 30 100.0 36 .............................. TTATCCATTAAATAATCTATGCTCACTTGGAAATAA 5825 30 100.0 35 .............................. TACATCAAGATGTAATCCCTTTATACGACTATTTC 5890 30 100.0 36 .............................. TTTGATGTGTAAACAGTCTTCGCTCTTTGATTAACT 5956 30 93.3 37 ........C.........G........... TAAGTTGGGGGGAGTACTGACTATGCAACAGGGAGGT 6023 30 96.7 36 ........C..................... TAATAATCAACAGTCTGTTTTTGTTTATAAAGATAG 6089 30 93.3 0 ........C....................G | ========== ====== ====== ====== ============================== ====================================== ================== 19 30 99.1 36 GTTTAATATCAACATATGATGTTTTGAAAT # Left flank : ATCTCACCAATTTCAGATACAACAATTATGGCATCAGCAGGTGCACAATGTCATCATGTTGGTCATGTTTCTACACAACTTCCTTATGCGATGGTTGTTGCAGTTGCATGTATTGTTGGTTATATTGTTGCTGGTCTGACACAGAATGTTTGGCTAACATTTTTAAGTGGCTTGATAACTTTATTAATCATGATATTTTGTATTAACAAGAAAGGCTAACCCTGTTGTGAAAAGATAAAAAGTTAAAATATGGTGTAAAATTAAAGATGATAATCTTATTAGAAACAGTATTGTTAATATATTTTATATGTTTGAATTGATTATAATTTACCAGCAACAATTATTGATATAATCAAAAAAACATTGAATATATCACATAAAAATAGAATTTTATGTTGATTTATGATATAATTATTTTTATTTGGTAAAAATATGAAAAAATATTGATAAATTCAATAGAATTTTATTTCTGCCAGTTATGAAAGTGTTGTTTTATCTGG # Right flank : GTTATTTATAATAAAAATATCCCTATATTAAGATGCTATAGGGATATTTTTTTATCTTCAATTTCTATTTTAATTTTTTCATAAAGTTCATATGTAGCAATACAATCAGCAATTGATCTATGTTCATTATTGGAAAGGTTTAAGTATTGGACCATATCTGTTAAACGATGATGTTTCATGTGAGGATAGACCTTTCTACAAAACTGAAGTGTATCCATATATTCATTTTCAATATCTATATGAAATTGATTTGCAACAAAGTTTAAGTCAAATGATGTATTGTGTCCTAATAAAATATCATCACCAATAAAACTGAAAACATCGTCTCTAATCTCATCAAGGGTTGGCATTCCTAATAACATATCATTTGTAATTCCCGTGAGTTTGGTTATAAAAGGGCTAACTTCACGTTCTGGATTAATGAGTTGAGAATATTTATCTATAATTTGTTGATTTCTTATTTTTAAAATTCCAACTTCAATAATCTTATCATCGGCCCA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATATCAACATATGATGTTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 1858-3211 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSVJ01000029.1 Coprobacillus cateniformis strain OM02-34 OM02-34.Scaf29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 1858 33 100.0 35 ................................. TTAGACATGATGTGATAAATAAGAGAACTATTAAC 1926 33 100.0 36 ................................. ATATTAGAGTTATTGCTGATTACGATATGTTATTTA 1995 33 100.0 37 ................................. TTGGGACTAATGCTTCGCTTGAACGTGCTTCCTCGAT 2065 33 100.0 37 ................................. TTGGAACAATAATAATACTTATCGAAAATACGCTCCA 2135 33 100.0 35 ................................. ATGAATATGATTTTGAAATTGGATATCATGGAGCT 2203 33 100.0 36 ................................. GAAGGAAATGGACAGTTGTTTAGAATAAAGACAATA 2272 33 100.0 35 ................................. AAGTTATACACAATTTGATTCGTTAATTTGTTGTA 2340 33 100.0 36 ................................. TTGTTTACGGGTCTTGGTACTCTTGCTATGGGTGCG 2409 33 100.0 36 ................................. CATCTTTTAAAGATAATGCAAGTGAAGTCTTAACCA 2478 33 100.0 38 ................................. ACTGGAGATAGTGAGTTAGGAAATAAGATTGTAAAATC 2549 33 100.0 37 ................................. TTTGATTTAGATGAAGATAGAAAGTCTATATTGAATG 2619 33 100.0 38 ................................. CCCTTCTAAAGTGCTTCCTAGAATAACAAGCGATCCCT 2690 33 100.0 36 ................................. AATAATGTCGCTGCGGCACTTGCTTGCTGGTCCTTG 2759 33 100.0 36 ................................. TTATCATAAAATGATGTGCTCCCTACATTTGCTTTG 2828 33 100.0 37 ................................. ATGATAAAGATAAGTTTTCTAATTTTAAGTGTTCTCT 2898 33 100.0 36 ................................. CTTAGAGAACAGTTTAATTGTGTTGTGTCTTGCTCT 2967 33 100.0 37 ................................. TTGCATCGCAAAGCCACGCATATATCTATAGGAGGTG 3037 33 100.0 38 ................................. TTGAATGTTCCTCTTGCTTTTACAGGTATTGTTAATTA 3108 33 97.0 38 .........A....................... CCATATGAATTGATTCTAATCTTTAAATTAGCGGTCTC 3179 33 97.0 0 .........A....................... | ========== ====== ====== ====== ================================= ====================================== ================== 20 33 99.7 37 GTATATAATCTAACCAATAGTTGGAATGTAAAT # Left flank : GTAAAAGATTTGACACATTGTTATAAGTGTGAAGAAAATTGCAAGAAAGGATTATTGAGAAAAATTAAACCATACACATTTACTCTATTTGCTAAAAAATATGGAGAAGAAAAGCTTTTGGATTGTTTAGAGAGAAATGAGAAAAATGGAGTTGTGTATCATCGAGATGGCATAAACGGAGATTATGATGATTTTGATGATGTAGAGCAGTTAATGAATTTTATCTTGACAGGAGTGCGATAAATCCCAGTTTGACAACTTCATATCCATACACACAAAGCAGTTAGTCTTAGGATTGACTGCTTTTTAAAAAGACACCATTTCAGTAATGATGTCTTTTGAGTGTTATTTTATAGTCATATCAAGGCTCATTCAACCGTGGTAAATTCGTGGTAAAATGAATGCTTTTTTATACTTCAAAATGCTTGAAAGTACAGTAGTTATACGGATAATCGAAAATTAGATATAAAATTTATATAAAAATAGTGTAGTATTTATGG # Right flank : TTTAAATGCTGTTTTGAAATACTGACTATACAAGTGATGAATTAAAGATTATAGTTTAATACCAACATATGATGTTTCGAAACTTAATGATTTATTTAATTATATTTTGTGAAGAAATAACAAAAAGAGAAGGACTTTACTTCAAAGTTAATTTTCTCCACCTTTATTCTAATAACATAGTTTAATTAATCTTTAATAGCCCATCTCATTTTGGTTGATTTGGCACGACTATTCATATGACATTCTTCTTTACTAGGTCTTATAACATTCCTTGCAGCATCACTATAAATACCAAGATTCTTCATTTCTTTAAAGGCCTTTTTAACAATTCTATCTTCTCCAGAATGAAAAGTAAGTATCGCAACTCTTCCGCCTGATTTAAGAATATTGGGGAGTTTTTCCATAAATTCAATAAGAACATCAAATTCATTATTGACCTCAATACGTAATGCTTGAAAAACTCTTGCAGCAGACTTTTTAATAGACTCTTTTCTTTCGTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATATAATCTAACCAATAGTTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.20,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [81.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //