Array 1 1360-1030 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJQJ010000095.1 Nostoc linckia FACHB-104 contig95, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1359 37 94.6 36 GC................................... TCATAGTTAGCAAAGGGGTCAATATTTAGGCGTAAC 1286 37 100.0 37 ..................................... GCGAGAATCGACTTGGCTAATAATATCAACTCCATTT 1212 37 100.0 40 ..................................... TTTAGCTCCCATAATTTTGCCAATTTCAGCAATTGGAGTT 1135 37 100.0 32 ..................................... TCACATCCTCCAGTAAAGGTTCCATACTTAGC 1066 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 5 37 98.9 36 CTTTCAACCCGCCTCAAGCTGTGAAGGGTATTGAAAC # Left flank : ACATGAAGTCATCAGCCTACCATCAGAGCGGGAAAAATCCGCTTCTTAAATTCAGCCTTGGCAAATTGTGGTATAGTAGTAGCTAGTTATAGCTTAATGGCTAGCTGCTGTTTGCGGGTGTAATTCAGTGGTAGAATGTCATCTTCCCATGGTGAACGTCGTGGGTTCGAGTCCCATCGCCCGCTTTTTATTCAATGTACATTAACTAATTATTTGTCACTGTTAACAGATTGATGTCATTTTTAACAAATTAGTGTCACTGTTAACAAATTAATCTACTCTTCAACAACTAACTTCCTTTTATTCTATGCTGCAACTGATGCTATCAACTCCAATTGTTGATTCAGCCTCTACAACAATAAAAATTGGGAAGGTGACATTCCTTTCAACCCACCTTTTTAATTTGGTACTTACATAATAAAGTTTGTTTGTCGCAACTGGCTCTTTGTTGCAGAAGCATTTGAAACGATAGTTCGCTAGTGTGAAAAAAATCTACCCAA # Right flank : TCCAGCGCCTCAAATCCTTCACCAACAAAGACTTCTAGAAGCATTTTGTCATATCTCCCAAAATCGCCTGTCACTCAACACTTAAAAAAGTAAATTAATTGACATAGTGAAGGCTATAAACCTTACTAGAGAAGCGATTCCAAGTTTTGGCAGATCCCCAAGGAAATTGACCCCGCTTCGATTCGCCAAAAAAAATAATTAAGGTGGGTTCCTCCTTGGTCGGAGGTGATTCAGTAGCCACTACTGCGGTAAACCCGCACCTCTATTACTGGGGGCGCACCTTATTCCTATCCACAAGGGATAGCAGCATCAAGGTGGGCAGCTACCAGGGTCAGAAAGCAAGACTGTTTAACAGCAGTCAAACTAACCCAAATTTACACAGCACAGAGGCTTGTAACAAGCATGAACTGCGGCGCTATTGAATATTCTTATTTTATTGTCAAGGTTCAGTTTTTTGTCAATCAGTTTTTTTGACGGGAATGGTAAGCTGAGATCGCTAA # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAACCCGCCTCAAGCTGTGAAGGGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : NA // Array 1 6123-6879 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJQJ010000126.1 Nostoc linckia FACHB-104 contig126, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 6123 37 100.0 34 ..................................... ATGTTGAAGCTGTAATCTCTGATAAATTTTAACA 6194 37 100.0 35 ..................................... AATATTGAGTAAGTCAGCCAATTCTACGCTTTTAG 6266 37 100.0 34 ..................................... ACGGAAATACAGCCCACAAGACTTGAGCATCGTG 6337 37 100.0 37 ..................................... AAGTCAATAGCTACCAGTAAAATCTTCACCGCCCAGA 6411 37 100.0 36 ..................................... ACTTATATAAATAAAAAACCCCCGGACAACGTAAAA 6484 37 100.0 34 ..................................... TGCGGTTATCTCTGCGTTCTCTTCTGCATATCTG 6555 37 100.0 36 ..................................... AATTGGGCTGATATCGTTAGGCGGTTCTTCCAAGGT 6628 37 100.0 33 ..................................... AGGATGGCGATCGCTTTGGTGGGGTAAGAATAT 6698 37 100.0 36 ..................................... TAGCTTTACCTGGAATTGTTCCAGGGATTTGAAAAG 6771 37 100.0 35 ..................................... GTTTGGCAGTATTCTTCAAGATGCGCTAATTCTTC 6843 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 11 37 100.0 35 GTTGAAATTTCATTTACTCCCTATTAGGGATTGAAAC # Left flank : TCTAGCCCGTAGCTGCCAGCTTCCAGAGCGCTTTGGACTTCATCTGATGAAAAGTTAACGCCGATGCTAACTAATGCTCGCTCGTATTTTTTGAAGATTTCGTATTCAATCGAGTCCTTTTCCCACAACCACACTCAACTATCTCCAAACAGTTAATCTCAAGTGTTCTTCACTCCATCATACTTTCAAGTTTATCTATGAACCATGATTGCTCTGGTAAAGTTGAGCGTACCAAAGGTATATTGTTGGATAACAATAATATTTTCCTTCCTGAATGCGCGAATAGATAGATGTTTAAAAGTTGATTTCGGCAAATGAGGCTAAAATATTGGCACATAAGACTTTTGGGGCAACACTTCATCAAAGTACCCGCGCACTTTATCTAGACTGGGTTTTCAGCGTTTACATACTGATTAACCATAATGTTTTATGCTATTATTAGCTCATTCGCGCAACAGAACCTTGAAAAGTGAATACAGCTTCTATTTCAGGCTTCCGCC # Right flank : CCACTTGGTGAGGCAGGCGGTAGTAGAGGCTCTAGTTACATTAATACTTCTAGGAAAGTAAGTATCTCCTGAAAATTAGGCAAATTACGTAATTTCTTGGTGGTAAGAATAATATTTAAGTATAATAATTTATAATACACTAAGTATATTTGCTTCAAATAAGCAATATATTAAAATCAGGAGTGCATAAATAAGTATGTATAATTCATATTTGAAGTTTTTTGCATTTTCTACATTATTTACATCTAGCTTGATTCTTTTTGGGCTCAAACAAGATACAGCAGATATTACTAACGCACAGCTAAATGAACAATCAATACTTGCAATTAATTGGTTACAGCAATCAGGGGAATATCAAGCCCTTACTTACCAAGCTTTTAATGTAGCCGAACTAATATTTGAGCAAGCAAAAGTTAAAAAAGTGCGTCAGCCAGCCATTATTGTTGATATTGATGAGACAGTTCTTGATAATAGTGCTTACCAAGCTACCTTGATTGATA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATTTCATTTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //