Array 1 453081-454764 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLGZ010000001.1 Streptococcus equi subsp. zooepidemicus strain SEZ_19-044 tig00000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 453081 32 100.0 35 ................................ CGTTTGGGTATAACATTAACGAGGAAGAGCATGAG 453148 32 100.0 35 ................................ TGATGTTGGAGAGGGACTTATTGTTTACTCAGGAA 453215 32 100.0 35 ................................ CAAAGTAACTTATCTAACAGATAGTGCCAAAATTG 453282 32 100.0 34 ................................ CATAACCAATCGTTTTTTGACCGTCAATCATATC 453348 32 100.0 35 ................................ TTACCATCTGATGATACTACCCGATGCCAAACCTT 453415 32 100.0 35 ................................ GTAAAAAAATAAAGTTAAAAAGTATTGACAAAGGT 453482 32 100.0 33 ................................ CTTGTTATAAAGTTTTTTATCGTTGACAAACTC 453547 32 100.0 34 ................................ TTCAGCAGCAGCCATGGCGTCTGCAGCAGCTTGT 453613 32 100.0 35 ................................ ATGATAAGCTTACCTTTAGCTAAAGCTTGCGGAGA 453680 32 100.0 34 ................................ GCCAGCGTAATGAGCAGGCAAAAGCGGAAGCAGC 453746 32 100.0 34 ................................ TTCGAGAAGCGACTCCATTTTTTAAAAAGTTGGA 453812 32 100.0 33 ................................ TCCTGTTGGTGAATTTTATCTATGGGTAGCTAA 453877 32 100.0 33 ................................ GGTGAAGTGGCACGTGAATTTTATTCTCCGTTA 453942 32 100.0 35 ................................ CTGTCTTAGACACTTTATAAAAGTCTCTAAAGGAG 454009 32 84.4 34 ........C..TGC.......T.......... AATAACCTAAGTCCGACAATGCAAAACGTGGTAG 454075 32 84.4 34 ........C..TGC.......T.......... CAATTGCTCTTTGGCAAAGTCAAGGACTTTTTCC 454141 32 84.4 33 ........C..TGC.......T.......... CGATAATCCATTACCACCAAACTCAAACAGAGC 454206 32 81.2 33 ........CCAT.C.......T.......... GTTGTGGTATTGGTCTGATAACCATTTCCCCAA 454271 32 81.2 34 ........CCAT.C.......T.......... TTTTCAAATTGGTTAAAGTCTTACCCTCAAAATT 454337 32 81.2 33 ........CCAT.C.......T.......... ATTAGTCCCAGCATGGTAGAAACCAAAGAGATT 454402 32 81.2 33 ........CCAT.C.......T.......... TAAAGAAACTCAAACATGGACTAATAAGCTTTT 454467 32 81.2 33 ........CCAT.C.......T.......... TTTTCAGCCTCAGCCTTAGCTTGTACAGCTTGA 454532 32 81.2 35 ........CCAT.C.......T.......... TGATGAAGCTGCTACAAAGCGTAAGGAGGAGTTAG 454599 32 84.4 35 ........C..TGC.......T.......... TTTGGCATGCCTCACATCAGACTCATGTCTAGCAT 454666 32 84.4 35 ........C..TGC.......T.......... CCGACACTGCGAACTAATCATTTGTGACTCCTTTC 454733 32 84.4 0 ........C..TGC.......T.......... | ========== ====== ====== ====== ================================ =================================== ================== 26 32 92.1 34 GTCTCGCCTTTCATGGGCGAGCGGATTGAAAT # Left flank : AAGGCTATTCGAGGGGATATTGATAGTTACCCACCTTTTATGATTTAGGAGACTGGTTGATGATGGTATTGGTTACTTATGATGTGAATACAGAAACAGCAGCAGGGCGAAAACGACTACGTCAGGTAGCAAAGTTATGTGTTGATTATGGCCAGCGTGTGCAGCATTCAGTATTTGAGTGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATACAGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACGCTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCCTACTTCTGTAAAAGGAGTGAGTGCGAGCCTGGGTCACTCATAAAATGCTGTGAGACTCGCGTTAAAATAAGCTAAAAAATAGAGAAATGAGGGGTTATAGCTGAATATGTTAGTAGCTAGCCTATATCATTTCTCTATAAACTGTGCTATATTGCGCA # Right flank : TTTTGCTGCTATGCAAGGAGTGACACTGATTGAAGTCGCTCTCTTCTCGAGGGCGTGGTCCGTATCCCTGGTACTTTTCATGAAGGGATAAATCATATCACATTAATCAAGTTGATTTAAGTTTTTTATGGTACTATGTCAAATAGATAAAAATCTCTGTGTCAAGTGTAGTGGGTGACTGATAACTAAGCACGAGAGGAGACGAAGGTCGCCTTCTCTTTTATGATGTTCAAAGCAAGGTAAATACTTTTCTTGAAGTTGTCAACGTTTCTGAATCCAAAAGCATTGCGCTTGATACCTTTGATAAATTTGTTAGTTGCTTCAAGCTTGGCGTTAGAATAAGGCAGTTCAATGGCATTGATGATATAGTCGTTATAGCGTATAAAGGTGTTTAAAGTCGTTTTGAAGGTGTGATTGAGATGAGGCAAAGCATCTTGACTTAACCCAAAGAAGAGCTCTGTCTTCTTTTCTTGCAAGTGAAAAAGAAGTCATTGGTACAG # Questionable array : NO Score: 8.72 # Score Detail : 1:0, 2:3, 3:3, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCGCCTTTCATGGGCGAGCGGATTGAAAT # Alternate repeat : GTCTCGCCCCATACGGGCGAGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : NA //